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The map label for this gene is ygjK [H]

Identifier: 156978091

GI number: 156978091

Start: 1993688

End: 1996378

Strand: Reverse

Name: ygjK [H]

Synonym: VIBHAR_06895

Alternate gene names: 156978091

Gene position: 1996378-1993688 (Counterclockwise)

Preceding gene: 156978092

Following gene: 156978090

Centisome position: 90.58

GC content: 49.02

Gene sequence:

>2691_bases
ATGCACTTTAAGACTTCTTTATGTGCGATTGCTGTCGGGGTTGCTCTAACACTTAGTGGATGCAACAGTAGTGATAATGA
CTCGAATGTGGAAGCGCCACTGAAAGCGGCTGAATTCCACAACACCATTGACCGTGCAGGTGTGCCAGTGGCACTACGTG
ATCTTCATGGTGGTCACCTTCGCTACATTCCTATGTTCGATAACGGTTCTTGGCATGGTCACACGTTAGATACCAAAGGT
GGTGAAATCACCTTAGGTGGTACAGCGTTGTTAACTGAAGAATACGTGTCATTCATGGCTGCACGTTTCGACCGTTTAAC
ACTGATGGTTGAAGGTGAAGCGATGCCGCTTGAGCTAACAGACGCTTACTCGCAACCAGGCGCACTGATTCAAGAGTACA
CAGGCGATAACGGCATCACTGCCGAACTTGAAATGCGCTTTGTGACCGACCGTACGTCTCTTGTTAAAACCACCATCAAG
AACCCGAACAAGCTGGCTATTCAAGGCGAATGGGACGGCGAGTTGATGCAAGATTACCGCGCTGACGATGGTGAACTATA
CAAAAACAGCGACAGCACAGTGCGCAGTGTTGAAGATGCATACCCTACTTACTCACGTGAAATCGCAGCGACAGAAAACG
GCGTAGAAGTGTCTTTTGGCGCGGTTCGCGACTCTTGGTCTCTGCTGACTTCAGGCGACTCTAAGTTTGTAGTAACACGT
TCTATCAAGCCAGAAACGTCGACCATCGATGATGATAAGAAAGGTTTTGTCCAAACGGCAGAGCTAGGTAATGGCGAAGA
AATCACGTTATACACGGCTTACACGCACGTGCAAAACACCGAAGAGCAAGCGTCTGAATTTGCCAAGTTAGACGACGTGA
TGGCCGATCCAAAAGGCTACATGTATGATTCTGCAATGCGTTGGGAAGAGTACCTAGAAAACGGTCTAACTAACGATGCC
GCTTCAAAAGAGCATGAATTCGTTGCAGTAAAAGCGATGGAAACACTGAGCGCAAACTGGCGTGGTGCAGCAGGTGCCAT
TGACCACGACACAGTAACACCATCAGTAACTGCGCCTTACTTCTCTGGCAACATGACTTGGCCGTGGGATACATGGAAAC
AAGCGTACGCAATGGCTCACTTCAACCCAGATGTGGCGATGGAAAACATTCGTACTGTATTCCAATACCAAGTTCAGTCT
GACGACCCTGTTCGCCCATGGGACGAAGGTTACTTGCTTGACGTGGTGACTTACAACTTGCCAGCAGAGCGTTGGGAAGG
CATGTCTGCGGAATACAAAAAAGTGTTTCCACTGGCGACAGACGGTTTGAACTGGAACGAACGCAACACGAAACCATCTC
TAGCTGCATGGGCAGTATGGGAAGTGTACACCGCACTGAAAGACGAGCATAACCGTCCGGAAGAAGCGAAGCAGTGGCTA
GAAGAGATGTATCCGAAGTTGGTGGCATTCCACGATTGGTGGCTACGTGCTCGCGATACAAACAAAAACGGCATCCCTGA
ATACGGTGCAGCAAAAGACCCAATTCATACTGTATTTGAAGATGATGTGAATGATGGTTCTTGGGGATCGGATGCGTCAG
TAGACGACATGAAGTTCCAGTACAAAGACGAAGCGAGTGGCGACAAGTGGATCAAAGAGACTGGCATCGAGAAATACAAC
CAGTTGCTAACGTCCGGTGATTACACTGCGATGAGCATCCCTGCAAAAGTCGCTGCGGGTTGGGAATCTGGCCGTGATAA
CGCGGGTGTATTTGGCTTTATCGACACCATTGACAACCTACAAGGTATGTCTGAACTACCGACACAAGATGAAGCTAAAG
TGATCGACCAAATGGGTCGTTACGCACACGACACCAATGGATTCGACAACACCTACGACATGGTCACGGGTGAAGACGGC
TCGGTGGTGACTTACCGTGATGATTCGGTTGAGAACATGGACAAGCTGGCTCTAGCGAAGAAAGACTGGGAAGTGAAGTT
CAACGAGAACACTGACGACGCGAACAAGTTGTCTGGCTATTCGCTGATGCAAGAGTCGGTAGACCAAGCCTCTTACTGGT
ACTCGGATAACCTGTTCCTATCTCAAATTGCAGAAGTACTGGGCAAAGCAGATAAAGCGGCTGAGTTTAAAGAGAAAGCA
GAAGACACCAAAGAGTACATCAACCGCTGTATGTTCGATGAATCAACCGGTTTCTACTACGACATCGAAGTGGTACCTGA
TGGCTTGAGCAACCAATGTGCTGGTCCAATGTTGGTGAAACGCGGTATGGGTCCAGAAGGTTGGTCTCCACTATTCAACA
ACGCGGCAACGCAAGCGCACGCAGATAAAGTAGTGAAGAACATGCTTGATACCAGCAAGTTTAACTCACCAATGATCCCA
CTTGGCACGGCGTCAATGGATAACCCGGCTTACGGCCCTGACATTTACTGGCGTGGTCGTGTGTGGCTGGATCAGTTCTA
CTTCGGTGTACGTGGTATGGACAACTACGGTTACGGTGTGGAAGCGCGTCAGATGGTGGATAAGCTATTCAAGAACGCAC
AAGGCTTAACGGAAACGACGCCAATTCAGGAAAACTACAACCCTGAAACGGGTGCAGTGCAGGGCGCAAACAACTTCTCT
TGGAGTGCTGCGCACCTATACATGCTGTACAACGGCTTCGTGGGCAAATAA

Upstream 100 bases:

>100_bases
AATAAATAAGGCTGAATCTTCATCATCGAAACTTGGCAGGGCACGTCTCGACCTTTTTTCGCCTGATCAGGACCAAAAGC
CAATAAATGAGGGATATAAC

Downstream 100 bases:

>100_bases
CACCTGTTAGTGAGTCACTAACACGTCAAATATTAAGCGTTGCAGATGACCCCCCCTAGCATCTGCAACCGCTTAACCCT
CTTCAAATTAGGCTCAGTAA

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 896; Mature: 896

Protein sequence:

>896_residues
MHFKTSLCAIAVGVALTLSGCNSSDNDSNVEAPLKAAEFHNTIDRAGVPVALRDLHGGHLRYIPMFDNGSWHGHTLDTKG
GEITLGGTALLTEEYVSFMAARFDRLTLMVEGEAMPLELTDAYSQPGALIQEYTGDNGITAELEMRFVTDRTSLVKTTIK
NPNKLAIQGEWDGELMQDYRADDGELYKNSDSTVRSVEDAYPTYSREIAATENGVEVSFGAVRDSWSLLTSGDSKFVVTR
SIKPETSTIDDDKKGFVQTAELGNGEEITLYTAYTHVQNTEEQASEFAKLDDVMADPKGYMYDSAMRWEEYLENGLTNDA
ASKEHEFVAVKAMETLSANWRGAAGAIDHDTVTPSVTAPYFSGNMTWPWDTWKQAYAMAHFNPDVAMENIRTVFQYQVQS
DDPVRPWDEGYLLDVVTYNLPAERWEGMSAEYKKVFPLATDGLNWNERNTKPSLAAWAVWEVYTALKDEHNRPEEAKQWL
EEMYPKLVAFHDWWLRARDTNKNGIPEYGAAKDPIHTVFEDDVNDGSWGSDASVDDMKFQYKDEASGDKWIKETGIEKYN
QLLTSGDYTAMSIPAKVAAGWESGRDNAGVFGFIDTIDNLQGMSELPTQDEAKVIDQMGRYAHDTNGFDNTYDMVTGEDG
SVVTYRDDSVENMDKLALAKKDWEVKFNENTDDANKLSGYSLMQESVDQASYWYSDNLFLSQIAEVLGKADKAAEFKEKA
EDTKEYINRCMFDESTGFYYDIEVVPDGLSNQCAGPMLVKRGMGPEGWSPLFNNAATQAHADKVVKNMLDTSKFNSPMIP
LGTASMDNPAYGPDIYWRGRVWLDQFYFGVRGMDNYGYGVEARQMVDKLFKNAQGLTETTPIQENYNPETGAVQGANNFS
WSAAHLYMLYNGFVGK

Sequences:

>Translated_896_residues
MHFKTSLCAIAVGVALTLSGCNSSDNDSNVEAPLKAAEFHNTIDRAGVPVALRDLHGGHLRYIPMFDNGSWHGHTLDTKG
GEITLGGTALLTEEYVSFMAARFDRLTLMVEGEAMPLELTDAYSQPGALIQEYTGDNGITAELEMRFVTDRTSLVKTTIK
NPNKLAIQGEWDGELMQDYRADDGELYKNSDSTVRSVEDAYPTYSREIAATENGVEVSFGAVRDSWSLLTSGDSKFVVTR
SIKPETSTIDDDKKGFVQTAELGNGEEITLYTAYTHVQNTEEQASEFAKLDDVMADPKGYMYDSAMRWEEYLENGLTNDA
ASKEHEFVAVKAMETLSANWRGAAGAIDHDTVTPSVTAPYFSGNMTWPWDTWKQAYAMAHFNPDVAMENIRTVFQYQVQS
DDPVRPWDEGYLLDVVTYNLPAERWEGMSAEYKKVFPLATDGLNWNERNTKPSLAAWAVWEVYTALKDEHNRPEEAKQWL
EEMYPKLVAFHDWWLRARDTNKNGIPEYGAAKDPIHTVFEDDVNDGSWGSDASVDDMKFQYKDEASGDKWIKETGIEKYN
QLLTSGDYTAMSIPAKVAAGWESGRDNAGVFGFIDTIDNLQGMSELPTQDEAKVIDQMGRYAHDTNGFDNTYDMVTGEDG
SVVTYRDDSVENMDKLALAKKDWEVKFNENTDDANKLSGYSLMQESVDQASYWYSDNLFLSQIAEVLGKADKAAEFKEKA
EDTKEYINRCMFDESTGFYYDIEVVPDGLSNQCAGPMLVKRGMGPEGWSPLFNNAATQAHADKVVKNMLDTSKFNSPMIP
LGTASMDNPAYGPDIYWRGRVWLDQFYFGVRGMDNYGYGVEARQMVDKLFKNAQGLTETTPIQENYNPETGAVQGANNFS
WSAAHLYMLYNGFVGK
>Mature_896_residues
MHFKTSLCAIAVGVALTLSGCNSSDNDSNVEAPLKAAEFHNTIDRAGVPVALRDLHGGHLRYIPMFDNGSWHGHTLDTKG
GEITLGGTALLTEEYVSFMAARFDRLTLMVEGEAMPLELTDAYSQPGALIQEYTGDNGITAELEMRFVTDRTSLVKTTIK
NPNKLAIQGEWDGELMQDYRADDGELYKNSDSTVRSVEDAYPTYSREIAATENGVEVSFGAVRDSWSLLTSGDSKFVVTR
SIKPETSTIDDDKKGFVQTAELGNGEEITLYTAYTHVQNTEEQASEFAKLDDVMADPKGYMYDSAMRWEEYLENGLTNDA
ASKEHEFVAVKAMETLSANWRGAAGAIDHDTVTPSVTAPYFSGNMTWPWDTWKQAYAMAHFNPDVAMENIRTVFQYQVQS
DDPVRPWDEGYLLDVVTYNLPAERWEGMSAEYKKVFPLATDGLNWNERNTKPSLAAWAVWEVYTALKDEHNRPEEAKQWL
EEMYPKLVAFHDWWLRARDTNKNGIPEYGAAKDPIHTVFEDDVNDGSWGSDASVDDMKFQYKDEASGDKWIKETGIEKYN
QLLTSGDYTAMSIPAKVAAGWESGRDNAGVFGFIDTIDNLQGMSELPTQDEAKVIDQMGRYAHDTNGFDNTYDMVTGEDG
SVVTYRDDSVENMDKLALAKKDWEVKFNENTDDANKLSGYSLMQESVDQASYWYSDNLFLSQIAEVLGKADKAAEFKEKA
EDTKEYINRCMFDESTGFYYDIEVVPDGLSNQCAGPMLVKRGMGPEGWSPLFNNAATQAHADKVVKNMLDTSKFNSPMIP
LGTASMDNPAYGPDIYWRGRVWLDQFYFGVRGMDNYGYGVEARQMVDKLFKNAQGLTETTPIQENYNPETGAVQGANNFS
WSAAHLYMLYNGFVGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=901, Percent_Identity=45.6159822419534, Blast_Score=754, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 100306; Mature: 100306

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFKTSLCAIAVGVALTLSGCNSSDNDSNVEAPLKAAEFHNTIDRAGVPVALRDLHGGHL
CCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEE
RYIPMFDNGSWHGHTLDTKGGEITLGGTALLTEEYVSFMAARFDRLTLMVEGEAMPLELT
EEEEEECCCCCCCCEECCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEC
DAYSQPGALIQEYTGDNGITAELEMRFVTDRTSLVKTTIKNPNKLAIQGEWDGELMQDYR
CCCCCCCHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHCCCCCEEEEEECCCHHHHHHHC
ADDGELYKNSDSTVRSVEDAYPTYSREIAATENGVEVSFGAVRDSWSLLTSGDSKFVVTR
CCCCCEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCEEECCCCEEEEEE
SIKPETSTIDDDKKGFVQTAELGNGEEITLYTAYTHVQNTEEQASEFAKLDDVMADPKGY
CCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHCCCCCC
MYDSAMRWEEYLENGLTNDAASKEHEFVAVKAMETLSANWRGAAGAIDHDTVTPSVTAPY
EEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCE
FSGNMTWPWDTWKQAYAMAHFNPDVAMENIRTVFQYQVQSDDPVRPWDEGYLLDVVTYNL
ECCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEECC
PAERWEGMSAEYKKVFPLATDGLNWNERNTKPSLAAWAVWEVYTALKDEHNRPEEAKQWL
CHHHHCCCCCCHHEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
EEMYPKLVAFHDWWLRARDTNKNGIPEYGAAKDPIHTVFEDDVNDGSWGSDASVDDMKFQ
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEE
YKDEASGDKWIKETGIEKYNQLLTSGDYTAMSIPAKVAAGWESGRDNAGVFGFIDTIDNL
ECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCEEEEHHHHHHH
QGMSELPTQDEAKVIDQMGRYAHDTNGFDNTYDMVTGEDGSVVTYRDDSVENMDKLALAK
CCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHC
KDWEVKFNENTDDANKLSGYSLMQESVDQASYWYSDNLFLSQIAEVLGKADKAAEFKEKA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHHHHHHHHH
EDTKEYINRCMFDESTGFYYDIEVVPDGLSNQCAGPMLVKRGMGPEGWSPLFNNAATQAH
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHH
ADKVVKNMLDTSKFNSPMIPLGTASMDNPAYGPDIYWRGRVWLDQFYFGVRGMDNYGYGV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCC
EARQMVDKLFKNAQGLTETTPIQENYNPETGAVQGANNFSWSAAHLYMLYNGFVGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHEEEEEEECCCCCC
>Mature Secondary Structure
MHFKTSLCAIAVGVALTLSGCNSSDNDSNVEAPLKAAEFHNTIDRAGVPVALRDLHGGHL
CCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEE
RYIPMFDNGSWHGHTLDTKGGEITLGGTALLTEEYVSFMAARFDRLTLMVEGEAMPLELT
EEEEEECCCCCCCCEECCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEC
DAYSQPGALIQEYTGDNGITAELEMRFVTDRTSLVKTTIKNPNKLAIQGEWDGELMQDYR
CCCCCCCHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHCCCCCEEEEEECCCHHHHHHHC
ADDGELYKNSDSTVRSVEDAYPTYSREIAATENGVEVSFGAVRDSWSLLTSGDSKFVVTR
CCCCCEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCEEECCCCEEEEEE
SIKPETSTIDDDKKGFVQTAELGNGEEITLYTAYTHVQNTEEQASEFAKLDDVMADPKGY
CCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHCCCCCC
MYDSAMRWEEYLENGLTNDAASKEHEFVAVKAMETLSANWRGAAGAIDHDTVTPSVTAPY
EEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCE
FSGNMTWPWDTWKQAYAMAHFNPDVAMENIRTVFQYQVQSDDPVRPWDEGYLLDVVTYNL
ECCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEECC
PAERWEGMSAEYKKVFPLATDGLNWNERNTKPSLAAWAVWEVYTALKDEHNRPEEAKQWL
CHHHHCCCCCCHHEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
EEMYPKLVAFHDWWLRARDTNKNGIPEYGAAKDPIHTVFEDDVNDGSWGSDASVDDMKFQ
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEE
YKDEASGDKWIKETGIEKYNQLLTSGDYTAMSIPAKVAAGWESGRDNAGVFGFIDTIDNL
ECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCEEEEHHHHHHH
QGMSELPTQDEAKVIDQMGRYAHDTNGFDNTYDMVTGEDGSVVTYRDDSVENMDKLALAK
CCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHC
KDWEVKFNENTDDANKLSGYSLMQESVDQASYWYSDNLFLSQIAEVLGKADKAAEFKEKA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHHHHHHHHH
EDTKEYINRCMFDESTGFYYDIEVVPDGLSNQCAGPMLVKRGMGPEGWSPLFNNAATQAH
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHH
ADKVVKNMLDTSKFNSPMIPLGTASMDNPAYGPDIYWRGRVWLDQFYFGVRGMDNYGYGV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCC
EARQMVDKLFKNAQGLTETTPIQENYNPETGAVQGANNFSWSAAHLYMLYNGFVGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]