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The map label for this gene is 156978088

Identifier: 156978088

GI number: 156978088

Start: 1991605

End: 1992024

Strand: Direct

Name: 156978088

Synonym: VIBHAR_06892

Alternate gene names: NA

Gene position: 1991605-1992024 (Clockwise)

Preceding gene: 156978085

Following gene: 156978089

Centisome position: 90.36

GC content: 47.38

Gene sequence:

>420_bases
ATGGCAAACCAGCGCAACCCCATTGAAATCAAGGCACTCGACCACGTGGTATTGAGAACGGATAATCTCGATGCGATGCT
CCGTTTCTATCGAGACCTATTGGGGTGTCCTATCGAGCGGGAATTGCCGGATTTAGGGCTGACGCAGTTACGTGCTGGCA
CAGCCATCATTGATTTGGTGACAGTTGAGAGTGAACTTGGAAAGTTAGGCGGTAAATCGCCAAGCCAAGATGGCCGCAAT
CTCGACCATTTCTGCCTGCAAATTGCGCCTTTTGAAGAGTCTGAGTTACTTGAATATCTTCATCAACATAATGTCCATGT
AGAAGAGTTTGCTGAACGATATGGTGCACAGGGCTTTGGTCGCTCTGTGTATTTAGAAGACCCAGAAGGCAATGTGGTCG
AGCTTAAACCACAGAAATAA

Upstream 100 bases:

>100_bases
GCTCTTAGTAAAATAAACGCGCGTAGTTATGCTGGCTCTGGCGATCAGCTTACTGGGTTAGTGCGTATAATTTTCTCAAT
GCTCGAAAAAGGAACACGTC

Downstream 100 bases:

>100_bases
CTCGTTGCTATTCCTAACTTTATGTCCTCATTTTATCGACTAGAAACGGCTTCCAATTAAACTGTTTCGCCGTACATTAC
GTATATGTGTTCCTAAGTTT

Product: methylmalonyl CoA epimerase

Products: NA

Alternate protein names: Lactoylglutathione Lyase; Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Methylmalonyl CoA Epimerase; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Dioxygenase

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MANQRNPIEIKALDHVVLRTDNLDAMLRFYRDLLGCPIERELPDLGLTQLRAGTAIIDLVTVESELGKLGGKSPSQDGRN
LDHFCLQIAPFEESELLEYLHQHNVHVEEFAERYGAQGFGRSVYLEDPEGNVVELKPQK

Sequences:

>Translated_139_residues
MANQRNPIEIKALDHVVLRTDNLDAMLRFYRDLLGCPIERELPDLGLTQLRAGTAIIDLVTVESELGKLGGKSPSQDGRN
LDHFCLQIAPFEESELLEYLHQHNVHVEEFAERYGAQGFGRSVYLEDPEGNVVELKPQK
>Mature_138_residues
ANQRNPIEIKALDHVVLRTDNLDAMLRFYRDLLGCPIERELPDLGLTQLRAGTAIIDLVTVESELGKLGGKSPSQDGRNL
DHFCLQIAPFEESELLEYLHQHNVHVEEFAERYGAQGFGRSVYLEDPEGNVVELKPQK

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15712; Mature: 15581

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQRNPIEIKALDHVVLRTDNLDAMLRFYRDLLGCPIERELPDLGLTQLRAGTAIIDLV
CCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEE
TVESELGKLGGKSPSQDGRNLDHFCLQIAPFEESELLEYLHQHNVHVEEFAERYGAQGFG
ECHHHHHHCCCCCCCCCCCCCCHHEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC
RSVYLEDPEGNVVELKPQK
CEEEEECCCCCEEEECCCC
>Mature Secondary Structure 
ANQRNPIEIKALDHVVLRTDNLDAMLRFYRDLLGCPIERELPDLGLTQLRAGTAIIDLV
CCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEE
TVESELGKLGGKSPSQDGRNLDHFCLQIAPFEESELLEYLHQHNVHVEEFAERYGAQGFG
ECHHHHHHCCCCCCCCCCCCCCHHEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC
RSVYLEDPEGNVVELKPQK
CEEEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA