Click here to switch to the map view.

The map label for this gene is 156978050

Identifier: 156978050

GI number: 156978050

Start: 1964261

End: 1964704

Strand: Reverse

Name: 156978050

Synonym: VIBHAR_06854

Alternate gene names: NA

Gene position: 1964704-1964261 (Counterclockwise)

Preceding gene: 156978053

Following gene: 156978049

Centisome position: 89.14

GC content: 46.62

Gene sequence:

>444_bases
ATGAAAAAGACATTGGCACTGATTGCACTTTTACCGACCATCTTTGTATCAACAACAGTGTTTGCCCAAGACTTCAGCGC
TCAAATTGAATCGCGTCAGAATGCATTTGAGCAAATAGAGTCGCTATCGAAACAAGCCGGCAAGACATTGAAAGGCAGCA
ATACCGATTGGCACGCACTAGAGCAGATTGGTCTTGAACTCACTCGTCACAGCGCACAACTGCAACAAGCGTTTCCAGAG
GGAAGCCAAGCTGAGAGCAAAGCGAAGAAAGAAGTGTGGAGCAAACCAGATAACTTCAATCGCTTGATGCTTCAAATGGA
CGAAGGGTTTGCACAGTTATATCAAGCTGCGCAGAACCAAAAAGTTTCATCGGCTGAGGCAGGACTTAAGCAAGCTCAGA
GTACTTGCCGAAGCTGTCATCGTGCATACCGCAGTCGTTGGTAA

Upstream 100 bases:

>100_bases
TTCTTTACGGTAATTCACATAACAATAGTTGTGTGTGCAATGATTGTTATGTAAATTAATTTGCAACCACACAGCAATAA
CGAAAAACCAGGAGAACGAA

Downstream 100 bases:

>100_bases
TCAAGCGATCCACAACATTGAATTTATATTGAAGCATAAAAGAAAATCGTTAAGTGAAAGGTAACCTTATGAAAAAAATC
ATTCTATTAAGCACGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKKTLALIALLPTIFVSTTVFAQDFSAQIESRQNAFEQIESLSKQAGKTLKGSNTDWHALEQIGLELTRHSAQLQQAFPE
GSQAESKAKKEVWSKPDNFNRLMLQMDEGFAQLYQAAQNQKVSSAEAGLKQAQSTCRSCHRAYRSRW

Sequences:

>Translated_147_residues
MKKTLALIALLPTIFVSTTVFAQDFSAQIESRQNAFEQIESLSKQAGKTLKGSNTDWHALEQIGLELTRHSAQLQQAFPE
GSQAESKAKKEVWSKPDNFNRLMLQMDEGFAQLYQAAQNQKVSSAEAGLKQAQSTCRSCHRAYRSRW
>Mature_147_residues
MKKTLALIALLPTIFVSTTVFAQDFSAQIESRQNAFEQIESLSKQAGKTLKGSNTDWHALEQIGLELTRHSAQLQQAFPE
GSQAESKAKKEVWSKPDNFNRLMLQMDEGFAQLYQAAQNQKVSSAEAGLKQAQSTCRSCHRAYRSRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16523; Mature: 16523

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLALIALLPTIFVSTTVFAQDFSAQIESRQNAFEQIESLSKQAGKTLKGSNTDWHAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
EQIGLELTRHSAQLQQAFPEGSQAESKAKKEVWSKPDNFNRLMLQMDEGFAQLYQAAQNQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
KVSSAEAGLKQAQSTCRSCHRAYRSRW
CHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKTLALIALLPTIFVSTTVFAQDFSAQIESRQNAFEQIESLSKQAGKTLKGSNTDWHAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
EQIGLELTRHSAQLQQAFPEGSQAESKAKKEVWSKPDNFNRLMLQMDEGFAQLYQAAQNQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
KVSSAEAGLKQAQSTCRSCHRAYRSRW
CHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA