| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is recX [H]
Identifier: 156978005
GI number: 156978005
Start: 1921130
End: 1921561
Strand: Direct
Name: recX [H]
Synonym: VIBHAR_06801
Alternate gene names: 156978005
Gene position: 1921130-1921561 (Clockwise)
Preceding gene: 156978004
Following gene: 156978007
Centisome position: 87.16
GC content: 41.9
Gene sequence:
>432_bases GTGTCTCAAGAGCAATTATACGATATCGCTGTCGGCTTACTTGCCAAGCGTGATTATGCTTCTGGTGAAATGCGACGTCA TCTTTCTAAGCAAGGTGATAATGAGTTGGTAGAGATGGTGATGGAACGCTTGCTATCTCATCACTACCTTGATGATGCTC GGCTCGCTGAGAGAGAAATATCAAAACAGTTGATCAAATTGCATGGTATGTCACGCATCAAACAAGAGCTAAGACAGAAG GGGTTAGACTCACTCGTTATTGACCAAGCACTTGAAGATACAGATGTTGACTGGTTTGAGCTTTGCCTGAAAGCAAAAGA GAAAAAGTTTGGCGACAACGTAGCTAGTGATCATGCAGAAAAAGCGAAAATGGTTCGTTATTTACAATACCGAGGCCATT CAATGTCAGCAATATTGGAATGTACTTCCTAA
Upstream 100 bases:
>100_bases TTATTGACGAAAGTTAAAGCTGTGTAAATAATCAGTATTGTCATCTCATTGATTACATAAGATTATTACATTGTTTATCT ATGTTAGGAGCTGCTAGAAC
Downstream 100 bases:
>100_bases CGGTCTTACTCAATGTTGTCTATAGACAAGGCTATGATCTTGAAAGATAATAGCACCATCCAGCGTACATCGTATAATGG CTATTACCTCAGCCTTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSQEQLYDIAVGLLAKRDYASGEMRRHLSKQGDNELVEMVMERLLSHHYLDDARLAEREISKQLIKLHGMSRIKQELRQK GLDSLVIDQALEDTDVDWFELCLKAKEKKFGDNVASDHAEKAKMVRYLQYRGHSMSAILECTS
Sequences:
>Translated_143_residues MSQEQLYDIAVGLLAKRDYASGEMRRHLSKQGDNELVEMVMERLLSHHYLDDARLAEREISKQLIKLHGMSRIKQELRQK GLDSLVIDQALEDTDVDWFELCLKAKEKKFGDNVASDHAEKAKMVRYLQYRGHSMSAILECTS >Mature_142_residues SQEQLYDIAVGLLAKRDYASGEMRRHLSKQGDNELVEMVMERLLSHHYLDDARLAEREISKQLIKLHGMSRIKQELRQKG LDSLVIDQALEDTDVDWFELCLKAKEKKFGDNVASDHAEKAKMVRYLQYRGHSMSAILECTS
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=147, Percent_Identity=36.0544217687075, Blast_Score=89, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 16539; Mature: 16408
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEQLYDIAVGLLAKRDYASGEMRRHLSKQGDNELVEMVMERLLSHHYLDDARLAEREI CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH SKQLIKLHGMSRIKQELRQKGLDSLVIDQALEDTDVDWFELCLKAKEKKFGDNVASDHAE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH KAKMVRYLQYRGHSMSAILECTS HHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure SQEQLYDIAVGLLAKRDYASGEMRRHLSKQGDNELVEMVMERLLSHHYLDDARLAEREI CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH SKQLIKLHGMSRIKQELRQKGLDSLVIDQALEDTDVDWFELCLKAKEKKFGDNVASDHAE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH KAKMVRYLQYRGHSMSAILECTS HHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA