| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977994
Identifier: 156977994
GI number: 156977994
Start: 1912367
End: 1913020
Strand: Reverse
Name: 156977994
Synonym: VIBHAR_06790
Alternate gene names: NA
Gene position: 1913020-1912367 (Counterclockwise)
Preceding gene: 156977995
Following gene: 156977993
Centisome position: 86.8
GC content: 41.28
Gene sequence:
>654_bases ATGAAGTATAGATTTTTAATTGCTGTAAGCATGTGCTTTTTACTTAATGGTTGCTTTGAGAGTAAGCCTGTTTCAGTCGC GAGTATTGGCAATGCAGGGTCATTAGGTGGCCCTCATTTTATTCGTGATATGTGGGTCAGTGACATCTATGGTGGAGGCT CAAATTTTGCGTATGGGAGCGTTCAGGGCTGTTGTAAAAGTGCAAGCATTGGAATTGGTATCCCTAGCGCTATAAAAGGC GAATGGGAAAATGGAGTTGGTGGCGGCTCATCTCGTGAAAAGTGGCAAAAGCGTTGGAAGCCCGAATGGGGTAATTTTGA TGAGAATTATGATACTAAATGGTTTCGAATTGATGATGTGATAGACAGTGAGCTTGCCAAGAAAAAAATAGAAACAATGA ACCATTACTACAAGAACCATCATGTAAACCCAGTCATGAAGCTTCTTGTTAATGATGACAAAGTTATGCTTCTGTATTCT ATCTTGTGTGTGAAGTCTGCAAATGATGACTGCACGGTTAACGAAGGTGCAGATCCTAATGGATGGATAGTTCCTTCCCC TAATAGACACCCTAAGAGCGTCGCTGTCGTTACCGTCTTATATGATGGTAAAGGAGAAGTGTCTGACAAACCATTTACGG AAAATACACCTTAG
Upstream 100 bases:
>100_bases CATGATGCACTCATCAATGCAGGGTGTGAGACTGCAATGGACAGTATTGTTAATGCGGTAACGAAAGAAGGAAACCAACT CAAGCGAGTGGTATTTGATA
Downstream 100 bases:
>100_bases CCATAGAAACAGCCGATTTTCCATACCTTAATCTGTATAGTCTTAGCCCACTTTCATAGAATCTGACAGTGGGCTTTTGT TGCTTTGCCATACCTGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKYRFLIAVSMCFLLNGCFESKPVSVASIGNAGSLGGPHFIRDMWVSDIYGGGSNFAYGSVQGCCKSASIGIGIPSAIKG EWENGVGGGSSREKWQKRWKPEWGNFDENYDTKWFRIDDVIDSELAKKKIETMNHYYKNHHVNPVMKLLVNDDKVMLLYS ILCVKSANDDCTVNEGADPNGWIVPSPNRHPKSVAVVTVLYDGKGEVSDKPFTENTP
Sequences:
>Translated_217_residues MKYRFLIAVSMCFLLNGCFESKPVSVASIGNAGSLGGPHFIRDMWVSDIYGGGSNFAYGSVQGCCKSASIGIGIPSAIKG EWENGVGGGSSREKWQKRWKPEWGNFDENYDTKWFRIDDVIDSELAKKKIETMNHYYKNHHVNPVMKLLVNDDKVMLLYS ILCVKSANDDCTVNEGADPNGWIVPSPNRHPKSVAVVTVLYDGKGEVSDKPFTENTP >Mature_217_residues MKYRFLIAVSMCFLLNGCFESKPVSVASIGNAGSLGGPHFIRDMWVSDIYGGGSNFAYGSVQGCCKSASIGIGIPSAIKG EWENGVGGGSSREKWQKRWKPEWGNFDENYDTKWFRIDDVIDSELAKKKIETMNHYYKNHHVNPVMKLLVNDDKVMLLYS ILCVKSANDDCTVNEGADPNGWIVPSPNRHPKSVAVVTVLYDGKGEVSDKPFTENTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24034; Mature: 24034
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRFLIAVSMCFLLNGCFESKPVSVASIGNAGSLGGPHFIRDMWVSDIYGGGSNFAYGS CCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC VQGCCKSASIGIGIPSAIKGEWENGVGGGSSREKWQKRWKPEWGNFDENYDTKWFRIDDV HHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHH IDSELAKKKIETMNHYYKNHHVNPVMKLLVNDDKVMLLYSILCVKSANDDCTVNEGADPN HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCC GWIVPSPNRHPKSVAVVTVLYDGKGEVSDKPFTENTP CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKYRFLIAVSMCFLLNGCFESKPVSVASIGNAGSLGGPHFIRDMWVSDIYGGGSNFAYGS CCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC VQGCCKSASIGIGIPSAIKGEWENGVGGGSSREKWQKRWKPEWGNFDENYDTKWFRIDDV HHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHH IDSELAKKKIETMNHYYKNHHVNPVMKLLVNDDKVMLLYSILCVKSANDDCTVNEGADPN HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCC GWIVPSPNRHPKSVAVVTVLYDGKGEVSDKPFTENTP CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA