| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977987
Identifier: 156977987
GI number: 156977987
Start: 1908706
End: 1909335
Strand: Direct
Name: 156977987
Synonym: VIBHAR_06783
Alternate gene names: NA
Gene position: 1908706-1909335 (Clockwise)
Preceding gene: 156977986
Following gene: 156977988
Centisome position: 86.6
GC content: 46.35
Gene sequence:
>630_bases ATGTGGGGATCCCTCAGCCTCAAAGCCCACGTAGCCAACACCTTTAGCCAATACAATCAGCAAAGCCACAACGTTCAACT GCGCTACCCATGTGCCCGTGAACAAGTACGCAATCAGTTCGATGAGCCCTCAATCAATCGAAGTATCGATATGGATTTAA ATGTCATCGCCTTTTACACCAAAGAGTTGGCGAGCGTAGAACACTTTATTGAAAAGACCGCCAAGCAGCACAACGCTCAA GATTATTCTCTCATCCAGACTGTACCTGGTATTGGTCGCATTCTCGCTCTCACTATCTTGTATGAGATCGGCAATATCGA GCGCTTCCCGTCGGTGCAAAACTTCGCTTCTTACTCAAGGTTAGTCAAATGCAAAGCCGAATCAGCGGGCAAACAAAAAG GAACCAACGGCAACAAGATTGGGAACGCCTACTTAAAATGGGCATTCTCGGAAGCGGCAGTTCTCTATTTACGCGGCAAT GAACCCGCCAAGAAATACATCCAACGCCTGCAAAAACGCATGAGCAAAGCCAAAGCGCTATCAGCGTTGGCTCATAAACT GGGGCGATGTGTCTACTTCATGTTAAGGAACAAAACAGTATTTGATGAGAAACGATTTTTACCCCAATAA
Upstream 100 bases:
>100_bases GAGTTGATAGGAAGAGAAGCTTACTCATTTAGCGTGAAGGATCTGGCCTTAGCCGTAGGAGGCCTCAAAGCGATAAGTGC GGCAGAGTTCCGGTGAAAAA
Downstream 100 bases:
>100_bases GTCGCACAATGAAGTGAGCTGAACGTCTAACTGGTGCTGAGTGAGAACACGTCACTGACTCAAATTTACTGGGATTTAAG CCCGAAAAAGTCGGTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: ISGsu4 Transposase; Arginyl-TRNA Synthetase Class Ic; ISGsu5 Transposase; Transposase Or Inactivated Derivative
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MWGSLSLKAHVANTFSQYNQQSHNVQLRYPCAREQVRNQFDEPSINRSIDMDLNVIAFYTKELASVEHFIEKTAKQHNAQ DYSLIQTVPGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGN EPAKKYIQRLQKRMSKAKALSALAHKLGRCVYFMLRNKTVFDEKRFLPQ
Sequences:
>Translated_209_residues MWGSLSLKAHVANTFSQYNQQSHNVQLRYPCAREQVRNQFDEPSINRSIDMDLNVIAFYTKELASVEHFIEKTAKQHNAQ DYSLIQTVPGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGN EPAKKYIQRLQKRMSKAKALSALAHKLGRCVYFMLRNKTVFDEKRFLPQ >Mature_209_residues MWGSLSLKAHVANTFSQYNQQSHNVQLRYPCAREQVRNQFDEPSINRSIDMDLNVIAFYTKELASVEHFIEKTAKQHNAQ DYSLIQTVPGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGN EPAKKYIQRLQKRMSKAKALSALAHKLGRCVYFMLRNKTVFDEKRFLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23926; Mature: 23926
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGSLSLKAHVANTFSQYNQQSHNVQLRYPCAREQVRNQFDEPSINRSIDMDLNVIAFYT CCCCCCHHHHHHHHHHHHCCHHCCEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH KELASVEHFIEKTAKQHNAQDYSLIQTVPGIGRILALTILYEIGNIERFPSVQNFASYSR HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGNEPAKKYIQRLQKRMSKAKAL HHHHHHHHCCCCCCCCCCHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHH SALAHKLGRCVYFMLRNKTVFDEKRFLPQ HHHHHHHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure MWGSLSLKAHVANTFSQYNQQSHNVQLRYPCAREQVRNQFDEPSINRSIDMDLNVIAFYT CCCCCCHHHHHHHHHHHHCCHHCCEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH KELASVEHFIEKTAKQHNAQDYSLIQTVPGIGRILALTILYEIGNIERFPSVQNFASYSR HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGNEPAKKYIQRLQKRMSKAKAL HHHHHHHHCCCCCCCCCCHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHH SALAHKLGRCVYFMLRNKTVFDEKRFLPQ HHHHHHHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA