Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977985

Identifier: 156977985

GI number: 156977985

Start: 1906952

End: 1907395

Strand: Direct

Name: 156977985

Synonym: VIBHAR_06781

Alternate gene names: NA

Gene position: 1906952-1907395 (Clockwise)

Preceding gene: 156977983

Following gene: 156977986

Centisome position: 86.52

GC content: 44.37

Gene sequence:

>444_bases
ATGAGATTCTATAACAACCAGCATAACTATTACTGTGGCATTGATCTGCATGCGCGCTTACTTTACGTCTGTATTCTCGA
TTCACTTGGCAATAAAGTCCTGCACAAGAAGATTGATGCCGATCCCGATGCGCTACTTGAGTTAATTACACCTTATCAAG
ATAACATCGTCATCGGTGTCGAATGTATGCATTGCTGGTACTGGGTTAGCGACTTATGCCTTGATTATGCGTTTGACTTT
GTACTCGGTCATGCGCTGTATATGAAAGCGATTCACGGTGGTAAAACGAAAAACGATCGTATCGATTCTTTCAAAATTGC
GTCACTGCTTCGTGGCGGTAATTTCCCTATCGCCTATGTTTACCCTAGAGCCATGCGAGCAACACGAGATTTGCTACGAC
GAAGAACCAAAATCATGCGCCATGGGGCTGACCTCAAAGCCTGA

Upstream 100 bases:

>100_bases
CGAATCCCTCTTGAACAGTTTGATACTCATTGAGCCTTCTCCTCCAACTTAGCCTCTCGACTAAGCTGGAAGGCGACGAA
ACCAAAACGGAGAAGACTCT

Downstream 100 bases:

>100_bases
GGGCTCCCCACAACTAGCATAGAAGAATCATGTAGATAGCGTGAAAAGTAGGCAGATTCATTTTGATCGGCGATTATAGC
ATCAATTGAAAAGATATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: ISGsu4 Transposase; Arginyl-TRNA Synthetase Class Ic; ISGsu5 Transposase; Transposase Or Inactivated Derivative; ISGsu5 Transposase Truncation

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGVECMHCWYWVSDLCLDYAFDF
VLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYVYPRAMRATRDLLRRRTKIMRHGADLKA

Sequences:

>Translated_147_residues
MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGVECMHCWYWVSDLCLDYAFDF
VLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYVYPRAMRATRDLLRRRTKIMRHGADLKA
>Mature_147_residues
MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGVECMHCWYWVSDLCLDYAFDF
VLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYVYPRAMRATRDLLRRRTKIMRHGADLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17054; Mature: 17054

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGV
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHH
ECMHCWYWVSDLCLDYAFDFVLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE
YPRAMRATRDLLRRRTKIMRHGADLKA
CHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGV
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHH
ECMHCWYWVSDLCLDYAFDFVLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE
YPRAMRATRDLLRRRTKIMRHGADLKA
CHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA