| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977985
Identifier: 156977985
GI number: 156977985
Start: 1906952
End: 1907395
Strand: Direct
Name: 156977985
Synonym: VIBHAR_06781
Alternate gene names: NA
Gene position: 1906952-1907395 (Clockwise)
Preceding gene: 156977983
Following gene: 156977986
Centisome position: 86.52
GC content: 44.37
Gene sequence:
>444_bases ATGAGATTCTATAACAACCAGCATAACTATTACTGTGGCATTGATCTGCATGCGCGCTTACTTTACGTCTGTATTCTCGA TTCACTTGGCAATAAAGTCCTGCACAAGAAGATTGATGCCGATCCCGATGCGCTACTTGAGTTAATTACACCTTATCAAG ATAACATCGTCATCGGTGTCGAATGTATGCATTGCTGGTACTGGGTTAGCGACTTATGCCTTGATTATGCGTTTGACTTT GTACTCGGTCATGCGCTGTATATGAAAGCGATTCACGGTGGTAAAACGAAAAACGATCGTATCGATTCTTTCAAAATTGC GTCACTGCTTCGTGGCGGTAATTTCCCTATCGCCTATGTTTACCCTAGAGCCATGCGAGCAACACGAGATTTGCTACGAC GAAGAACCAAAATCATGCGCCATGGGGCTGACCTCAAAGCCTGA
Upstream 100 bases:
>100_bases CGAATCCCTCTTGAACAGTTTGATACTCATTGAGCCTTCTCCTCCAACTTAGCCTCTCGACTAAGCTGGAAGGCGACGAA ACCAAAACGGAGAAGACTCT
Downstream 100 bases:
>100_bases GGGCTCCCCACAACTAGCATAGAAGAATCATGTAGATAGCGTGAAAAGTAGGCAGATTCATTTTGATCGGCGATTATAGC ATCAATTGAAAAGATATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: ISGsu4 Transposase; Arginyl-TRNA Synthetase Class Ic; ISGsu5 Transposase; Transposase Or Inactivated Derivative; ISGsu5 Transposase Truncation
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGVECMHCWYWVSDLCLDYAFDF VLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYVYPRAMRATRDLLRRRTKIMRHGADLKA
Sequences:
>Translated_147_residues MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGVECMHCWYWVSDLCLDYAFDF VLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYVYPRAMRATRDLLRRRTKIMRHGADLKA >Mature_147_residues MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGVECMHCWYWVSDLCLDYAFDF VLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYVYPRAMRATRDLLRRRTKIMRHGADLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17054; Mature: 17054
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGV CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHH ECMHCWYWVSDLCLDYAFDFVLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE YPRAMRATRDLLRRRTKIMRHGADLKA CHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRFYNNQHNYYCGIDLHARLLYVCILDSLGNKVLHKKIDADPDALLELITPYQDNIVIGV CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHH ECMHCWYWVSDLCLDYAFDFVLGHALYMKAIHGGKTKNDRIDSFKIASLLRGGNFPIAYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE YPRAMRATRDLLRRRTKIMRHGADLKA CHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA