Click here to switch to the map view.

The map label for this gene is 156977982

Identifier: 156977982

GI number: 156977982

Start: 1904731

End: 1905180

Strand: Reverse

Name: 156977982

Synonym: VIBHAR_06778

Alternate gene names: NA

Gene position: 1905180-1904731 (Counterclockwise)

Preceding gene: 156977984

Following gene: 156977981

Centisome position: 86.44

GC content: 38.44

Gene sequence:

>450_bases
ATGAAGATCAGTGAAATAAACGGCTTTGAGGCTACGGGGTTCGTCATTCGCACAACTAATGCTGGTGAAGTAAATCCATC
GACTGCAAAAATTGGAGAGCTTTGGGCAAAGTTTTACTCAAATGCAGCTCCAAAATTGAATGAAAAATCAAAAGTTTTTG
GCATTTACACAAATTATGAGTCTGATTTCACGGGGGCTTTTGACGTTATCGCTTGTTCGGATACTTTGTCACCAGAAATA
TTATCAGACTCAGTAAAAGTTAACGTTACTTCTGGCAAATACGTAACTTTTGCTGCAAGCGGTGAAATGCCACAAGCAGT
TATAGATCTTTGGGGTAAAGTCTGGAGTTACTTTAGTTCTGAAAACTGCCTTTACAAACGCGCATACACAACAGACTTTG
AATACTATAAAAGTGCTCATGAAGTTGAGATCTCTATTGCTGTTAGATAG

Upstream 100 bases:

>100_bases
TTGTTTGCAAACTAATTATGGCTCTGGCTTTACGCTAACCCACGAAATTGGAGGCTAGCACCTCGTGGGGGTCATTATGT
CTATGTAACTAGGAGGAAAA

Downstream 100 bases:

>100_bases
TTACATAACACATATGAGCCTTCTGCCTGTCAATAGGCAATAACATCCTATTGGCTGCGTGAGCAGCCAATGCTCTTCGA
ACAACAAAGTTATCTACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Activator; Orphan Protein; CTA2 Subfamily 1 Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKISEINGFEATGFVIRTTNAGEVNPSTAKIGELWAKFYSNAAPKLNEKSKVFGIYTNYESDFTGAFDVIACSDTLSPEI
LSDSVKVNVTSGKYVTFAASGEMPQAVIDLWGKVWSYFSSENCLYKRAYTTDFEYYKSAHEVEISIAVR

Sequences:

>Translated_149_residues
MKISEINGFEATGFVIRTTNAGEVNPSTAKIGELWAKFYSNAAPKLNEKSKVFGIYTNYESDFTGAFDVIACSDTLSPEI
LSDSVKVNVTSGKYVTFAASGEMPQAVIDLWGKVWSYFSSENCLYKRAYTTDFEYYKSAHEVEISIAVR
>Mature_149_residues
MKISEINGFEATGFVIRTTNAGEVNPSTAKIGELWAKFYSNAAPKLNEKSKVFGIYTNYESDFTGAFDVIACSDTLSPEI
LSDSVKVNVTSGKYVTFAASGEMPQAVIDLWGKVWSYFSSENCLYKRAYTTDFEYYKSAHEVEISIAVR

Specific function: Unknown

COG id: COG3708

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16538; Mature: 16538

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISEINGFEATGFVIRTTNAGEVNPSTAKIGELWAKFYSNAAPKLNEKSKVFGIYTNYE
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
SDFTGAFDVIACSDTLSPEILSDSVKVNVTSGKYVTFAASGEMPQAVIDLWGKVWSYFSS
CCCCCCEEEEEECCCCCHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCC
ENCLYKRAYTTDFEYYKSAHEVEISIAVR
CCEEEEEEECCCHHHHCCCEEEEEEEEEC
>Mature Secondary Structure
MKISEINGFEATGFVIRTTNAGEVNPSTAKIGELWAKFYSNAAPKLNEKSKVFGIYTNYE
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
SDFTGAFDVIACSDTLSPEILSDSVKVNVTSGKYVTFAASGEMPQAVIDLWGKVWSYFSS
CCCCCCEEEEEECCCCCHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCC
ENCLYKRAYTTDFEYYKSAHEVEISIAVR
CCEEEEEEECCCHHHHCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA