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The map label for this gene is yafK [C]

Identifier: 156977970

GI number: 156977970

Start: 1896847

End: 1897287

Strand: Reverse

Name: yafK [C]

Synonym: VIBHAR_06766

Alternate gene names: 156977970

Gene position: 1897287-1896847 (Counterclockwise)

Preceding gene: 156977973

Following gene: 156977967

Centisome position: 86.08

GC content: 45.35

Gene sequence:

>441_bases
GTGTCCGGTGCTCAGGCTGCGGTTGACTTGGTCAAAGTTGATAAGTCAAAACGCAGAATGTATCTGATGGACAATGGCGA
AGTGGTTAAAGAATATCGGATTGCGTTAGGGGCTAATCCGAAAGGACACAAGCAAGAAGAGGGTGACAATAGAACGCCGG
AAGGAGATTACACGCTAGTTTACGTGATTAACGACTCCGCTTTCTATCGCTCCGTTCATATCAGTTACCCAGATGCAATT
GATCGTTTGGAGGCGCATCGAAGAGGAGTTTCTCCTGGTGGTGCGATTAAAATTCACGGCCTAAAAAATGGAGAGACTCA
AGCTCCACAGTTTATTCAGAGCTTTGACTGGACCAATGGTTGTATCGCCATTACCAATGAAGAGATGGATGAATTTATCA
GGCTCGTCAAAATGGGAACTCCGATTAATATCGAGTGGTAG

Upstream 100 bases:

>100_bases
TAGCATGGGTTCTCTTTTTTTGTTTTCCCTATGAGTGGGTTAGTTAGGCGTTCTGGCGATGTCAGTAAAATGGTTGTCTT
TAATCTTATGTTGTACGTTT

Downstream 100 bases:

>100_bases
TGGAGCTCCATTTCCGAGTTTATTTTTAAGGCATAAAACGGCTTGGGTGATCACTAAAGATACCATCCAATGCAGGTAGG
TGTTTTAGCTTGTTGGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSGAQAAVDLVKVDKSKRRMYLMDNGEVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLVYVINDSAFYRSVHISYPDAI
DRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCIAITNEEMDEFIRLVKMGTPINIEW

Sequences:

>Translated_146_residues
MSGAQAAVDLVKVDKSKRRMYLMDNGEVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLVYVINDSAFYRSVHISYPDAI
DRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCIAITNEEMDEFIRLVKMGTPINIEW
>Mature_145_residues
SGAQAAVDLVKVDKSKRRMYLMDNGEVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLVYVINDSAFYRSVHISYPDAID
RLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCIAITNEEMDEFIRLVKMGTPINIEW

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16414; Mature: 16283

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAQAAVDLVKVDKSKRRMYLMDNGEVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLV
CCCHHHHHHHEEECCCCCEEEEECCCCEEEEEHEEECCCCCCCCCCCCCCCCCCCCEEEE
YVINDSAFYRSVHISYPDAIDRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNG
EEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCC
CIAITNEEMDEFIRLVKMGTPINIEW
EEEEECHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
SGAQAAVDLVKVDKSKRRMYLMDNGEVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLV
CCHHHHHHHEEECCCCCEEEEECCCCEEEEEHEEECCCCCCCCCCCCCCCCCCCCEEEE
YVINDSAFYRSVHISYPDAIDRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNG
EEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCC
CIAITNEEMDEFIRLVKMGTPINIEW
EEEEECHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA