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The map label for this gene is 156977959

Identifier: 156977959

GI number: 156977959

Start: 1886425

End: 1887597

Strand: Reverse

Name: 156977959

Synonym: VIBHAR_06755

Alternate gene names: NA

Gene position: 1887597-1886425 (Counterclockwise)

Preceding gene: 156977960

Following gene: 156977958

Centisome position: 85.64

GC content: 46.72

Gene sequence:

>1173_bases
ATGATGAAGCAATTCTTTATCGGAGCGGTGTTAAGCCTGAGTGCTTTTACCACTGTCGCGAATGAACTGAGTCAGTACAC
GGCGACTCGTGTTCAGCGTGCCCACAACCTAGCGCAAGAAGAAAAGTTGCAAGAAGCCATCTCCACGCTCGAAGGCCTCG
ACTTATCTCGCGACTATGATCAAGCGTTTGTTGCTCGTATGCTGGGTATTTTCTACTGGCAAAATGAGCAAGTTAAGCCT
GCCATCAAACAACTGGAGATCGCTGTGAATAGTGGTCTTTTGAAAGACGAGCAAGCTTGGCAAACACGTAAGATGTTGGC
GGATATGTTGCTCAACGAGCAGCAATTTTCTAAAGCTCTACCTCATTACTACGACTTGAGTAAAGCAGTACCTAAAACGC
AAAAAGCACATGATATTTGGTTACGTATCGCACAGTCTCATTACCAGTTAAGTCAATGGAACAAAGTGCTTTCTGCGATG
GCTCGATACGAGAAATTGGGTCAGCCAGATGAGATGGCTCCGTTATCGATAAAATTGTCTGCAGAGCTTGAACTGAAAAA
GTGGGGTCCTGCAACTGGCACGATCAAACGCTTGATTGCGATTGAGCCTGAGCGTGTGGAATGGTGGCGTCAGCTTGTTG
CTCTGTATTTACGTGTTGATGATGACAAGCGTGCGCTGGATTCTCTCGCTCTTGCTAAATTACAAGGCGTCGCGTTGAAC
CAAGATGACTTAAGACTTCTTGCTCAGCTTTATGGCAAGCGTGGCATCCCGGAGCGAGCCGCGAAAGTGTTGGGTGAGCT
CGATGACATTAACTCAGATAGCAAACTGAAAGCTCAACAAGCGACGTTTTGGCAGATGGCTAAGGAGTGGGATAAGTCGA
TAGCAAGTTGGCGAGTGGCTGCAAAGTTGGATCGTCAATACTACTGGAATTTGTCTCAACTGCTTGTTCAAGAAGGTCAA
TACAAAGACGCGCTGGTTGTTTTGGACAAGGTTTCTGGGCGTAAAGCCGATGTGGCATTAGTGAAGACTCGTGCTTACTA
CAAGCTGAAACGCCTAGAAGATGCACTAGCGAATGCCAAACGTGCAAACGAGATTGAACCATCAACCCAAGCCGAGAGCT
GGGTTAAATACTTGTCTCAACTACGCAAAGCAAAAACGAGCCAGAATAGCTAA

Upstream 100 bases:

>100_bases
TTCGTGCATTGAAGAAGTCGAAGTACCAACCTAAAGTCGAAAACGGTGTCGCGGTGGAGCGCTTTGGGCAAACCAGAAGA
GTGGAGTTCAAGTTACCCAA

Downstream 100 bases:

>100_bases
GCCAATTGTAAACAGGCTATGTGTTAATGCTCGAAAGACCCGAGGTAACTCTCGGGTCTTTTTGTTTGTAAATATTGAGT
CTGGTTCGATCTCTTTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; TPR Domain Protein; TPR Domain Protein Component Of nB System; TPR Repeat Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein; Short Chain Dehydrogenase

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MMKQFFIGAVLSLSAFTTVANELSQYTATRVQRAHNLAQEEKLQEAISTLEGLDLSRDYDQAFVARMLGIFYWQNEQVKP
AIKQLEIAVNSGLLKDEQAWQTRKMLADMLLNEQQFSKALPHYYDLSKAVPKTQKAHDIWLRIAQSHYQLSQWNKVLSAM
ARYEKLGQPDEMAPLSIKLSAELELKKWGPATGTIKRLIAIEPERVEWWRQLVALYLRVDDDKRALDSLALAKLQGVALN
QDDLRLLAQLYGKRGIPERAAKVLGELDDINSDSKLKAQQATFWQMAKEWDKSIASWRVAAKLDRQYYWNLSQLLVQEGQ
YKDALVVLDKVSGRKADVALVKTRAYYKLKRLEDALANAKRANEIEPSTQAESWVKYLSQLRKAKTSQNS

Sequences:

>Translated_390_residues
MMKQFFIGAVLSLSAFTTVANELSQYTATRVQRAHNLAQEEKLQEAISTLEGLDLSRDYDQAFVARMLGIFYWQNEQVKP
AIKQLEIAVNSGLLKDEQAWQTRKMLADMLLNEQQFSKALPHYYDLSKAVPKTQKAHDIWLRIAQSHYQLSQWNKVLSAM
ARYEKLGQPDEMAPLSIKLSAELELKKWGPATGTIKRLIAIEPERVEWWRQLVALYLRVDDDKRALDSLALAKLQGVALN
QDDLRLLAQLYGKRGIPERAAKVLGELDDINSDSKLKAQQATFWQMAKEWDKSIASWRVAAKLDRQYYWNLSQLLVQEGQ
YKDALVVLDKVSGRKADVALVKTRAYYKLKRLEDALANAKRANEIEPSTQAESWVKYLSQLRKAKTSQNS
>Mature_390_residues
MMKQFFIGAVLSLSAFTTVANELSQYTATRVQRAHNLAQEEKLQEAISTLEGLDLSRDYDQAFVARMLGIFYWQNEQVKP
AIKQLEIAVNSGLLKDEQAWQTRKMLADMLLNEQQFSKALPHYYDLSKAVPKTQKAHDIWLRIAQSHYQLSQWNKVLSAM
ARYEKLGQPDEMAPLSIKLSAELELKKWGPATGTIKRLIAIEPERVEWWRQLVALYLRVDDDKRALDSLALAKLQGVALN
QDDLRLLAQLYGKRGIPERAAKVLGELDDINSDSKLKAQQATFWQMAKEWDKSIASWRVAAKLDRQYYWNLSQLLVQEGQ
YKDALVVLDKVSGRKADVALVKTRAYYKLKRLEDALANAKRANEIEPSTQAESWVKYLSQLRKAKTSQNS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44691; Mature: 44691

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKQFFIGAVLSLSAFTTVANELSQYTATRVQRAHNLAQEEKLQEAISTLEGLDLSRDYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QAFVARMLGIFYWQNEQVKPAIKQLEIAVNSGLLKDEQAWQTRKMLADMLLNEQQFSKAL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHC
PHYYDLSKAVPKTQKAHDIWLRIAQSHYQLSQWNKVLSAMARYEKLGQPDEMAPLSIKLS
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
AELELKKWGPATGTIKRLIAIEPERVEWWRQLVALYLRVDDDKRALDSLALAKLQGVALN
CEEEHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
QDDLRLLAQLYGKRGIPERAAKVLGELDDINSDSKLKAQQATFWQMAKEWDKSIASWRVA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLDRQYYWNLSQLLVQEGQYKDALVVLDKVSGRKADVALVKTRAYYKLKRLEDALANAK
HHHHHHHHHCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RANEIEPSTQAESWVKYLSQLRKAKTSQNS
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMKQFFIGAVLSLSAFTTVANELSQYTATRVQRAHNLAQEEKLQEAISTLEGLDLSRDYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QAFVARMLGIFYWQNEQVKPAIKQLEIAVNSGLLKDEQAWQTRKMLADMLLNEQQFSKAL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHC
PHYYDLSKAVPKTQKAHDIWLRIAQSHYQLSQWNKVLSAMARYEKLGQPDEMAPLSIKLS
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
AELELKKWGPATGTIKRLIAIEPERVEWWRQLVALYLRVDDDKRALDSLALAKLQGVALN
CEEEHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
QDDLRLLAQLYGKRGIPERAAKVLGELDDINSDSKLKAQQATFWQMAKEWDKSIASWRVA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLDRQYYWNLSQLLVQEGQYKDALVVLDKVSGRKADVALVKTRAYYKLKRLEDALANAK
HHHHHHHHHCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RANEIEPSTQAESWVKYLSQLRKAKTSQNS
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA