| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977950
Identifier: 156977950
GI number: 156977950
Start: 1880158
End: 1880709
Strand: Reverse
Name: 156977950
Synonym: VIBHAR_06746
Alternate gene names: NA
Gene position: 1880709-1880158 (Counterclockwise)
Preceding gene: 156977951
Following gene: 156977949
Centisome position: 85.33
GC content: 46.56
Gene sequence:
>552_bases ATGATTACCCAGAAAGTTCGCCCAGATAATGGCAGTCGCGAAGGCAAATGGGTTGCTCTGACCATTGCTGGCATACTCGC TATATCAACGCTTTTGCTGCCTTATCATCAAACCGAATCAGAACATACTGAAGCACTCGCACATCAAGTATTGATTACCG ATCTTGAACAAGAAGAACTTGCCATGATTGCTGAGCTCAAACTTGCTCATGAGGAAATCCGTGATCTTCATATTGATGAA GGCCAATGGCCAGAAATCAGTGAGCTGGAAGAATTTTGGGTTGCTCCATTTGTTAAAGACCAAAGCTGGCAGCGCAAAGG CTCTCATCAGTGGCAAAAGCTGGATACGGGTCTTTACATTGGTGTGAGGCAAGGTGAGAAGGGCTCGGCTTCGATACTCC TAGACAGTCGTCATGAGCAAGCTGATATTTGGCTCTCTACATCAGCTTCACTAGGGCAATTGAGTCACCTTATCCAGCAA GACGAGCGAAAGCAAAATGGCTGGCACCAGGTTGTCTTAATGCCTTCATCCACTGCTACGCATGCCTACTAA
Upstream 100 bases:
>100_bases CGATTGCTGAATTTACTCATCCTCAAACGGACTTCTACCTTGTCTTCGATGCTGGTCACGAAAACCCAGTAGAAGTGGAT GTGGTTGAGTTAAAAGAAAA
Downstream 100 bases:
>100_bases GTCGTTATGAACCATCAATATTGCGATCAACAAGTCATCACGTTCAATAAGTAACCATCAATATGATAACAACTATGAAG AAACGCGCCTTCTTACGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MITQKVRPDNGSREGKWVALTIAGILAISTLLLPYHQTESEHTEALAHQVLITDLEQEELAMIAELKLAHEEIRDLHIDE GQWPEISELEEFWVAPFVKDQSWQRKGSHQWQKLDTGLYIGVRQGEKGSASILLDSRHEQADIWLSTSASLGQLSHLIQQ DERKQNGWHQVVLMPSSTATHAY
Sequences:
>Translated_183_residues MITQKVRPDNGSREGKWVALTIAGILAISTLLLPYHQTESEHTEALAHQVLITDLEQEELAMIAELKLAHEEIRDLHIDE GQWPEISELEEFWVAPFVKDQSWQRKGSHQWQKLDTGLYIGVRQGEKGSASILLDSRHEQADIWLSTSASLGQLSHLIQQ DERKQNGWHQVVLMPSSTATHAY >Mature_183_residues MITQKVRPDNGSREGKWVALTIAGILAISTLLLPYHQTESEHTEALAHQVLITDLEQEELAMIAELKLAHEEIRDLHIDE GQWPEISELEEFWVAPFVKDQSWQRKGSHQWQKLDTGLYIGVRQGEKGSASILLDSRHEQADIWLSTSASLGQLSHLIQQ DERKQNGWHQVVLMPSSTATHAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20807; Mature: 20807
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITQKVRPDNGSREGKWVALTIAGILAISTLLLPYHQTESEHTEALAHQVLITDLEQEEL CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH AMIAELKLAHEEIRDLHIDEGQWPEISELEEFWVAPFVKDQSWQRKGSHQWQKLDTGLYI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCHHHHHCCCEEE GVRQGEKGSASILLDSRHEQADIWLSTSASLGQLSHLIQQDERKQNGWHQVVLMPSSTAT EEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC HAY CCC >Mature Secondary Structure MITQKVRPDNGSREGKWVALTIAGILAISTLLLPYHQTESEHTEALAHQVLITDLEQEEL CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH AMIAELKLAHEEIRDLHIDEGQWPEISELEEFWVAPFVKDQSWQRKGSHQWQKLDTGLYI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCHHHHHCCCEEE GVRQGEKGSASILLDSRHEQADIWLSTSASLGQLSHLIQQDERKQNGWHQVVLMPSSTAT EEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC HAY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA