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The map label for this gene is scbA [H]

Identifier: 156977949

GI number: 156977949

Start: 1879160

End: 1880095

Strand: Reverse

Name: scbA [H]

Synonym: VIBHAR_06745

Alternate gene names: 156977949

Gene position: 1880095-1879160 (Counterclockwise)

Preceding gene: 156977950

Following gene: 156977948

Centisome position: 85.3

GC content: 45.83

Gene sequence:

>936_bases
ATGATAACAACTATGAAGAAACGCGCCTTCTTACGTCGAATTCTAACGGCATGTACTTTACTGGCCGTATCCACTTCAAC
CTTCGCAGATAAGCTGAACATAGGCATTACCTTGCAGCCTTATTACAGCTATGTCAAAGCGGTGGTCGGAGATAAAGCAG
AGATCATTCCTTTGGTCGATGCGGGCTTTAATCCTCATAACTACTTGCCGCAACCGAATGATCTTAAGCGTTTGAACCAA
ATGGATGTGATTGTCGTGAATGGGATTGGCCATGACGATTTTGCACTAAAAGTGATCCAAGCGGCTCAACGTGATGACCT
AGTGGTGATAGAAGCAAACAAAGAAGTACCGCTGTTACCAGCAATGGGGCAATCAGTCGGCAAAGGCGCGGTGAATCCAC
ATACATTTGTTGGCCTATCGACTACGATTCAAAAGGTTTACACCATTGCGAGTGAACTGAGTAAACTTGACCCAGAAAAT
GCCGCTTTTTACCGTAAAAATGCGCGAAAGTACGCAAAAGAGTTTCGCCTTCTAAAGCGTGATGCCATGTTGTCACTTGG
TCAGTTAGATACGGCAGGCATGAAGGTTGCGACCACGCACAATGCTTACGGTTATATCTTGCAAGATTTCGGTGTCGATG
TTGCAGCGGTGATTGAACCAGCACATGGTGTTGAGCCAAGTGCTAGCCAACTTCAAGAAACCATCGAGAAGATTCGTCAA
TCCGGTATTGACGTGCTGTTTTACGAACTCAATATGCCTAACCGCTTTGTTGATACGATTGAAGAAGCGACAGGTGTACA
GCTTTACCGTTTTTCTCATATGACCCATGGCGAGTACGAAGCCAATAAGGTTGAAGTTGAAATGCGTGAAAACGTCGCGA
CGCTTATTGAAGCGATGAAGTTCGTCGCAAGCAAGCACGCGCAGGAGAAAGCGTGA

Upstream 100 bases:

>100_bases
TCTTAATGCCTTCATCCACTGCTACGCATGCCTACTAAGTCGTTATGAACCATCAATATTGCGATCAACAAGTCATCACG
TTCAATAAGTAACCATCAAT

Downstream 100 bases:

>100_bases
TGCCAGGTCCTTCTATTTCTCTTAACGGGGTAAGCCTGAAATATGGTGACAACCTCATTTTGCAAGGTATTCAAACCCAG
TTCGAGGCGGGACAATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MITTMKKRAFLRRILTACTLLAVSTSTFADKLNIGITLQPYYSYVKAVVGDKAEIIPLVDAGFNPHNYLPQPNDLKRLNQ
MDVIVVNGIGHDDFALKVIQAAQRDDLVVIEANKEVPLLPAMGQSVGKGAVNPHTFVGLSTTIQKVYTIASELSKLDPEN
AAFYRKNARKYAKEFRLLKRDAMLSLGQLDTAGMKVATTHNAYGYILQDFGVDVAAVIEPAHGVEPSASQLQETIEKIRQ
SGIDVLFYELNMPNRFVDTIEEATGVQLYRFSHMTHGEYEANKVEVEMRENVATLIEAMKFVASKHAQEKA

Sequences:

>Translated_311_residues
MITTMKKRAFLRRILTACTLLAVSTSTFADKLNIGITLQPYYSYVKAVVGDKAEIIPLVDAGFNPHNYLPQPNDLKRLNQ
MDVIVVNGIGHDDFALKVIQAAQRDDLVVIEANKEVPLLPAMGQSVGKGAVNPHTFVGLSTTIQKVYTIASELSKLDPEN
AAFYRKNARKYAKEFRLLKRDAMLSLGQLDTAGMKVATTHNAYGYILQDFGVDVAAVIEPAHGVEPSASQLQETIEKIRQ
SGIDVLFYELNMPNRFVDTIEEATGVQLYRFSHMTHGEYEANKVEVEMRENVATLIEAMKFVASKHAQEKA
>Mature_311_residues
MITTMKKRAFLRRILTACTLLAVSTSTFADKLNIGITLQPYYSYVKAVVGDKAEIIPLVDAGFNPHNYLPQPNDLKRLNQ
MDVIVVNGIGHDDFALKVIQAAQRDDLVVIEANKEVPLLPAMGQSVGKGAVNPHTFVGLSTTIQKVYTIASELSKLDPEN
AAFYRKNARKYAKEFRLLKRDAMLSLGQLDTAGMKVATTHNAYGYILQDFGVDVAAVIEPAHGVEPSASQLQETIEKIRQ
SGIDVLFYELNMPNRFVDTIEEATGVQLYRFSHMTHGEYEANKVEVEMRENVATLIEAMKFVASKHAQEKA

Specific function: Part of an ATP-driven transport system for manganese. Does not exhibit adhesion properties [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 34534; Mature: 34534

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTMKKRAFLRRILTACTLLAVSTSTFADKLNIGITLQPYYSYVKAVVGDKAEIIPLVD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEEE
AGFNPHNYLPQPNDLKRLNQMDVIVVNGIGHDDFALKVIQAAQRDDLVVIEANKEVPLLP
CCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCH
AMGQSVGKGAVNPHTFVGLSTTIQKVYTIASELSKLDPENAAFYRKNARKYAKEFRLLKR
HHCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DAMLSLGQLDTAGMKVATTHNAYGYILQDFGVDVAAVIEPAHGVEPSASQLQETIEKIRQ
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
SGIDVLFYELNMPNRFVDTIEEATGVQLYRFSHMTHGEYEANKVEVEMRENVATLIEAMK
CCCEEEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHH
FVASKHAQEKA
HHHHHHHHCCC
>Mature Secondary Structure
MITTMKKRAFLRRILTACTLLAVSTSTFADKLNIGITLQPYYSYVKAVVGDKAEIIPLVD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEEE
AGFNPHNYLPQPNDLKRLNQMDVIVVNGIGHDDFALKVIQAAQRDDLVVIEANKEVPLLP
CCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCH
AMGQSVGKGAVNPHTFVGLSTTIQKVYTIASELSKLDPENAAFYRKNARKYAKEFRLLKR
HHCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DAMLSLGQLDTAGMKVATTHNAYGYILQDFGVDVAAVIEPAHGVEPSASQLQETIEKIRQ
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
SGIDVLFYELNMPNRFVDTIEEATGVQLYRFSHMTHGEYEANKVEVEMRENVATLIEAMK
CCCEEEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHH
FVASKHAQEKA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8675315 [H]