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The map label for this gene is melR [C]

Identifier: 156977934

GI number: 156977934

Start: 1862944

End: 1863810

Strand: Reverse

Name: melR [C]

Synonym: VIBHAR_06729

Alternate gene names: 156977934

Gene position: 1863810-1862944 (Counterclockwise)

Preceding gene: 156977937

Following gene: 156977932

Centisome position: 84.56

GC content: 44.52

Gene sequence:

>867_bases
ATGGCGTACATCGAAAAAATACCTCAGAGACCGGGCTTTTCTTGGCGCTATCGTCGAATTGATGAGTCAACAAAGCAGTC
TGATTTACACTTTCATGATGATGTGTATGAGTTGGTTATTCATCGTCACTTTGATGGAGTGTTAAATGTCGGCCATTGCG
AGATGGATATCGAACATAATCAGATGTTGTTGATTGCCCCTGGCGTTCCGCATTCTTTTTGCTCTACGTCTTCGAAAGAC
AATTGTGAGACACACGTGGTTTGGTTTAAGCGTGAGTGGATTTCCAATCTCATGTTTTATTGTACGGAGCTACGTAAACT
GGACCCGTTATTAAAAGCTGCCAATAAAGGTGTGGTCTTTTCTAAGGGAACGGCCCAACAAGTGGTGGACTTGATGCATG
AGCTGATGAAAGTCCCTGCAATGGAACAGCTTGCCCGTTTTATTCACGTTCTTTCTTTGCTTGCCCATGATGAAGCCGCA
AAAACACTGATGACGCATTCTTACCTCTCGCTGAGTGAACATGAGCAACAAGAAAGAGAGCGGGTTGCTAAGGTCAATGC
GTATCTTGAGCAGCACTTTGCTCGTAAAATAACCCTTGCCGACTTAGCGAACGATTTATCGCTCAGTGAAAGTGCCGTGA
CTCGATTATTTCAAAAGCACTTTAAAGAACCTTTCAGCCAGCGCTTGATGAAGCTGCGTATTAATCACGCTGCGGAATTG
CTGCAATCGACTGAGTTACCGATCGGGATTGTGTTTGAGCGAGTAGGGTATCGGAATCAAGCTTTATTTAATCGCCATTT
CAAAACTTACAAAGGGCTTACCCCACGAGATTACCGACAACATTACCAGCAACGCATTCAGCCCTAG

Upstream 100 bases:

>100_bases
TATGCCGCTCAATATCAATACTATTGAGGCGTAATAAAGAATCGACCTGTATTACTGATACTATTTACGCGTAGAGCAAT
ATTATCTAGCAGGGTGATGA

Downstream 100 bases:

>100_bases
CCTCTTGCTTAGTTTTGGCAGGTGTGTCCTCTTTTTGATGTCGAGTGAGAATTTATGTGCAACTGGTATGTTATTTGCCA
GGTTGTTGAAGAATCATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator Arac Family; Activator Protein MtlR; Two Component Transcriptional Regulator AraC Family; Transcriptional Regulator AraC Family Protein; Two-Component Response Regulator; Transcriptional Regulator Protein; Transcriptional Regulator MtlR; Activator Protein; Transcriptional Activator MltR; Response Regulator; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Helix-Turn-Helix AraC Type; AraC Family Transcription Regulator Protein; Msm Operon Regulatory Protein; Transcriptional Activator; Transcriptional Regulatory Protein; Transcriptional Regulator AraC/XylS Family; MSM Operon Regulatory Protein; AraC Family Transcription Regulator; Transcription Regulator Protein; Two Component Transcriptional Regulator Arac Family; Transcriptional Regulator Protein AraC Family; Helix-Turn-Helix Protein; LOW QUALITY PROTEIN Transcriptional Regulator; PAS Fold Family Protein; Lactose Operon Transcription Activator; Response Regulator Receiver Protein

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MAYIEKIPQRPGFSWRYRRIDESTKQSDLHFHDDVYELVIHRHFDGVLNVGHCEMDIEHNQMLLIAPGVPHSFCSTSSKD
NCETHVVWFKREWISNLMFYCTELRKLDPLLKAANKGVVFSKGTAQQVVDLMHELMKVPAMEQLARFIHVLSLLAHDEAA
KTLMTHSYLSLSEHEQQERERVAKVNAYLEQHFARKITLADLANDLSLSESAVTRLFQKHFKEPFSQRLMKLRINHAAEL
LQSTELPIGIVFERVGYRNQALFNRHFKTYKGLTPRDYRQHYQQRIQP

Sequences:

>Translated_288_residues
MAYIEKIPQRPGFSWRYRRIDESTKQSDLHFHDDVYELVIHRHFDGVLNVGHCEMDIEHNQMLLIAPGVPHSFCSTSSKD
NCETHVVWFKREWISNLMFYCTELRKLDPLLKAANKGVVFSKGTAQQVVDLMHELMKVPAMEQLARFIHVLSLLAHDEAA
KTLMTHSYLSLSEHEQQERERVAKVNAYLEQHFARKITLADLANDLSLSESAVTRLFQKHFKEPFSQRLMKLRINHAAEL
LQSTELPIGIVFERVGYRNQALFNRHFKTYKGLTPRDYRQHYQQRIQP
>Mature_287_residues
AYIEKIPQRPGFSWRYRRIDESTKQSDLHFHDDVYELVIHRHFDGVLNVGHCEMDIEHNQMLLIAPGVPHSFCSTSSKDN
CETHVVWFKREWISNLMFYCTELRKLDPLLKAANKGVVFSKGTAQQVVDLMHELMKVPAMEQLARFIHVLSLLAHDEAAK
TLMTHSYLSLSEHEQQERERVAKVNAYLEQHFARKITLADLANDLSLSESAVTRLFQKHFKEPFSQRLMKLRINHAAELL
QSTELPIGIVFERVGYRNQALFNRHFKTYKGLTPRDYRQHYQQRIQP

Specific function: Transcription Activator For The Expression Of The Melab Operon. Melr Binds At Two Sites Located Upstream Of The Melab Transcription Site. [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33800; Mature: 33669

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIEKIPQRPGFSWRYRRIDESTKQSDLHFHDDVYELVIHRHFDGVLNVGHCEMDIEHN
CCHHHHCCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCEECCCEEEEECCC
QMLLIAPGVPHSFCSTSSKDNCETHVVWFKREWISNLMFYCTELRKLDPLLKAANKGVVF
EEEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SKGTAQQVVDLMHELMKVPAMEQLARFIHVLSLLAHDEAAKTLMTHSYLSLSEHEQQERE
ECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVAKVNAYLEQHFARKITLADLANDLSLSESAVTRLFQKHFKEPFSQRLMKLRINHAAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSTELPIGIVFERVGYRNQALFNRHFKTYKGLTPRDYRQHYQQRIQP
HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AYIEKIPQRPGFSWRYRRIDESTKQSDLHFHDDVYELVIHRHFDGVLNVGHCEMDIEHN
CHHHHCCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCEECCCEEEEECCC
QMLLIAPGVPHSFCSTSSKDNCETHVVWFKREWISNLMFYCTELRKLDPLLKAANKGVVF
EEEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SKGTAQQVVDLMHELMKVPAMEQLARFIHVLSLLAHDEAAKTLMTHSYLSLSEHEQQERE
ECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVAKVNAYLEQHFARKITLADLANDLSLSESAVTRLFQKHFKEPFSQRLMKLRINHAAEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSTELPIGIVFERVGYRNQALFNRHFKTYKGLTPRDYRQHYQQRIQP
HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA