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The map label for this gene is yaiC [C]

Identifier: 156977906

GI number: 156977906

Start: 1833732

End: 1835090

Strand: Reverse

Name: yaiC [C]

Synonym: VIBHAR_06699

Alternate gene names: 156977906

Gene position: 1835090-1833732 (Counterclockwise)

Preceding gene: 156977909

Following gene: 156977903

Centisome position: 83.26

GC content: 45.47

Gene sequence:

>1359_bases
ATGCAGTACTCATCGAAGAAGCAAGGCTACTTTGCATTGTTCTTCCTCACTTTTTTTGCCCTATGCGTTGGAGTCATTGA
GTTGTTGCACCACAACCAGCTCAACCTTCACCGAGAGCGACTTCAAGTTGAGGCCAAAGAACAACTTTCTATGCTCCGCT
CCAATTTAGAAGCGGACCTGATGGCTGACATATACAAAGCTAGCACGCTTGCGACTCTTATTACATTGCTACCGAACCAT
GAAAACCGCAGGTTAAACATGGCTGCGAATAGTATCTTCAATAAAAGCAATCATATTACGGTAATCGGCATCGCGGAAAA
TGATTTGGTAAGCCATATCTATCCACGTCGAGGGAACGAGCGTGTTATTGGGCTGGATTACCGAACGGTGCCAGCGCAGT
GGGTTCAAATCCAAAAAGCCAAAGACATTCAAGAGATATTCATTGCAGGTCCTGTCGAGCTCGTTCAAGGTGGGCGAGGA
TTGATTGTTCGTGTGCCTGTATTTCGTGATCCCCCAATAAACAAGGATTACTGGGGTGTGATCAGTGCTGTGATCGACTT
TAATGGTTTGCTCCGAGAAGCCGGGGTGATTGACTTCTCTTCTCATTACCCGATGACCATTCGTGGTTATGACAGCAGTG
GCGAGCTTGGCGATATATTTTTCGGTGAGCCGAAGCCTAGTGGGAAGGTCTACGCCAAAGAGCAAGTGCATTTTCCCTAC
GGAGGCTGGAGCTTGGCGGTGTATTCCGGTGCGGATTTAGACCAGCAATTACCATGGTACACATTGCAGCTAACGAGATT
AGTCGGCTATCCGATTGTTCTTGGATTAAGTATTGCCCTGATTGTGATTTACCGATTGTATATTGTGGCCGATAACCGAG
CACTGCATGATGAACTTACCCAATTGCCCAATCGTCGTTACTTTATGCAGTCTTATAAGCATCAATTTCAGATCGCGAAA
CGCTATAAAAAGCGCTACAGCTTTGCACTTGTGAACATCGATCTTGATCGCTTTAAGCATATGAACGATACCTATGGTCA
TGATGCAGGCGATAAAGTGCTGATCGCCTGTGCTGAGCGGATTAGAAGCAGTTTACGACGTTCGGATATTGTGGCTCGCA
TGGGAGGAGATGAATTTCTCGTGATTGTCCACAATCCGAAAACGGAAGACAGCATTCATGCTCTAGTGAAAAAGCTTCGT
TTTGCCCTGTGCTCGAATCCAGTCATTTATGAACAAGACTTGATTTATCTGAGAACTAGCATTGGGTATGCGATGTTTGA
TCCTGAAATGAATTCACCTCAACAGATGATGAAAATCGCCGATGAACGCATGTATCAGCAAAAACACTACGGTGGATAA

Upstream 100 bases:

>100_bases
TATTACCTTTACGATAGCTATTAGTTATCCTTAAGGTAAATAATTATTTTAACAATAATTAAAGAAAACTCTTGGAACGC
CGAGAGTTAGTGGGGAACAG

Downstream 100 bases:

>100_bases
TCAGTAAAACCATGAAACTAGAGCCCCGCACACTTGCGGGGCTTTTTAATTTTGAATTTCTTTCTTATTAAAACGCCATT
TTTCTGATAAATGTATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MQYSSKKQGYFALFFLTFFALCVGVIELLHHNQLNLHRERLQVEAKEQLSMLRSNLEADLMADIYKASTLATLITLLPNH
ENRRLNMAANSIFNKSNHITVIGIAENDLVSHIYPRRGNERVIGLDYRTVPAQWVQIQKAKDIQEIFIAGPVELVQGGRG
LIVRVPVFRDPPINKDYWGVISAVIDFNGLLREAGVIDFSSHYPMTIRGYDSSGELGDIFFGEPKPSGKVYAKEQVHFPY
GGWSLAVYSGADLDQQLPWYTLQLTRLVGYPIVLGLSIALIVIYRLYIVADNRALHDELTQLPNRRYFMQSYKHQFQIAK
RYKKRYSFALVNIDLDRFKHMNDTYGHDAGDKVLIACAERIRSSLRRSDIVARMGGDEFLVIVHNPKTEDSIHALVKKLR
FALCSNPVIYEQDLIYLRTSIGYAMFDPEMNSPQQMMKIADERMYQQKHYGG

Sequences:

>Translated_452_residues
MQYSSKKQGYFALFFLTFFALCVGVIELLHHNQLNLHRERLQVEAKEQLSMLRSNLEADLMADIYKASTLATLITLLPNH
ENRRLNMAANSIFNKSNHITVIGIAENDLVSHIYPRRGNERVIGLDYRTVPAQWVQIQKAKDIQEIFIAGPVELVQGGRG
LIVRVPVFRDPPINKDYWGVISAVIDFNGLLREAGVIDFSSHYPMTIRGYDSSGELGDIFFGEPKPSGKVYAKEQVHFPY
GGWSLAVYSGADLDQQLPWYTLQLTRLVGYPIVLGLSIALIVIYRLYIVADNRALHDELTQLPNRRYFMQSYKHQFQIAK
RYKKRYSFALVNIDLDRFKHMNDTYGHDAGDKVLIACAERIRSSLRRSDIVARMGGDEFLVIVHNPKTEDSIHALVKKLR
FALCSNPVIYEQDLIYLRTSIGYAMFDPEMNSPQQMMKIADERMYQQKHYGG
>Mature_452_residues
MQYSSKKQGYFALFFLTFFALCVGVIELLHHNQLNLHRERLQVEAKEQLSMLRSNLEADLMADIYKASTLATLITLLPNH
ENRRLNMAANSIFNKSNHITVIGIAENDLVSHIYPRRGNERVIGLDYRTVPAQWVQIQKAKDIQEIFIAGPVELVQGGRG
LIVRVPVFRDPPINKDYWGVISAVIDFNGLLREAGVIDFSSHYPMTIRGYDSSGELGDIFFGEPKPSGKVYAKEQVHFPY
GGWSLAVYSGADLDQQLPWYTLQLTRLVGYPIVLGLSIALIVIYRLYIVADNRALHDELTQLPNRRYFMQSYKHQFQIAK
RYKKRYSFALVNIDLDRFKHMNDTYGHDAGDKVLIACAERIRSSLRRSDIVARMGGDEFLVIVHNPKTEDSIHALVKKLR
FALCSNPVIYEQDLIYLRTSIGYAMFDPEMNSPQQMMKIADERMYQQKHYGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=212, Percent_Identity=32.5471698113208, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI87081977, Length=154, Percent_Identity=34.4155844155844, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788381, Length=158, Percent_Identity=35.4430379746835, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI87082007, Length=161, Percent_Identity=31.055900621118, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788956, Length=156, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI145693134, Length=161, Percent_Identity=32.9192546583851, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87081881, Length=172, Percent_Identity=33.7209302325581, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787802, Length=188, Percent_Identity=31.3829787234043, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787262, Length=185, Percent_Identity=29.1891891891892, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787816, Length=173, Percent_Identity=31.7919075144509, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787541, Length=169, Percent_Identity=31.9526627218935, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081974, Length=169, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787056, Length=170, Percent_Identity=32.9411764705882, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788085, Length=91, Percent_Identity=37.3626373626374, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 51848; Mature: 51848

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50839 CHASE ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYSSKKQGYFALFFLTFFALCVGVIELLHHNQLNLHRERLQVEAKEQLSMLRSNLEADL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
MADIYKASTLATLITLLPNHENRRLNMAANSIFNKSNHITVIGIAENDLVSHIYPRRGNE
HHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCC
RVIGLDYRTVPAQWVQIQKAKDIQEIFIAGPVELVQGGRGLIVRVPVFRDPPINKDYWGV
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCHHHHH
ISAVIDFNGLLREAGVIDFSSHYPMTIRGYDSSGELGDIFFGEPKPSGKVYAKEQVHFPY
HHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCEEEEEEEECCC
GGWSLAVYSGADLDQQLPWYTLQLTRLVGYPIVLGLSIALIVIYRLYIVADNRALHDELT
CCEEEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH
QLPNRRYFMQSYKHQFQIAKRYKKRYSFALVNIDLDRFKHMNDTYGHDAGDKVLIACAER
HCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHH
IRSSLRRSDIVARMGGDEFLVIVHNPKTEDSIHALVKKLRFALCSNPVIYEQDLIYLRTS
HHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEEEC
IGYAMFDPEMNSPQQMMKIADERMYQQKHYGG
CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQYSSKKQGYFALFFLTFFALCVGVIELLHHNQLNLHRERLQVEAKEQLSMLRSNLEADL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
MADIYKASTLATLITLLPNHENRRLNMAANSIFNKSNHITVIGIAENDLVSHIYPRRGNE
HHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCC
RVIGLDYRTVPAQWVQIQKAKDIQEIFIAGPVELVQGGRGLIVRVPVFRDPPINKDYWGV
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCHHHHH
ISAVIDFNGLLREAGVIDFSSHYPMTIRGYDSSGELGDIFFGEPKPSGKVYAKEQVHFPY
HHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCEEEEEEEECCC
GGWSLAVYSGADLDQQLPWYTLQLTRLVGYPIVLGLSIALIVIYRLYIVADNRALHDELT
CCEEEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH
QLPNRRYFMQSYKHQFQIAKRYKKRYSFALVNIDLDRFKHMNDTYGHDAGDKVLIACAER
HCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHH
IRSSLRRSDIVARMGGDEFLVIVHNPKTEDSIHALVKKLRFALCSNPVIYEQDLIYLRTS
HHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEEEC
IGYAMFDPEMNSPQQMMKIADERMYQQKHYGG
CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]