Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977879

Identifier: 156977879

GI number: 156977879

Start: 1810039

End: 1811310

Strand: Direct

Name: 156977879

Synonym: VIBHAR_06671

Alternate gene names: NA

Gene position: 1810039-1811310 (Clockwise)

Preceding gene: 156977877

Following gene: 156977881

Centisome position: 82.12

GC content: 46.54

Gene sequence:

>1272_bases
ATGCAATCTCACAATAGCTTCTCTATTAATCTTAACCAGCAAAAGTCCATAGCGAAAAAGCGTCTAAAAGCGATCCGCCA
AAATGATGCCAACGCACTTGATCAGGTTAAGCAATTTCATTCCCAACCCGAAACCCTCACGCCAGAGTCTATCCAGCTTG
CAGATGTTCAACACGCCCTAGCTAGAGAGCTTGGCTTACCCAGTTGGAACAAGTTAAAAGCTCATGTAGAAGAGCTAGAA
AGTCACAAGCTCGCTATCAACAACCAAGCAAATCCACTTGATACCGAACTAACAACACTGCACGTCCGCTGTGGGCACGA
TATTCAACAGCAACTAAAGACATGTGGGTTCGAGGGTGACTTCTTACCCATGATTGATCCATTGTGCGTCGGTCCCATTC
CGAGCAATCAAAAAGGATTTGTCGCTATTCGAGCACAATACGTTGTAGACACATTACTGCCTGTTATGGGGAGAAAAGAC
TCGGTGCAAGAGGTAGCGCAGTTTGAGCAAGGCAACATCCATACCCTGCTCGACCAGCAATACGAACGCATCGTGTTTTG
GGTTGAACATGATGCCTACGATCAGTTCATGCTACTTCGAGGGCTATCTCTGCTAGATAACACCGAAGGTAAAGTCATTG
AGATCATCGAGTTCAACCAGTTTCCGGGAACCGAGCGGTTTATTGGCTTTGGGCAACTTCCTGCAGAGGCGATTCGATCG
TGTTGGCAGTATCGAAAGCCTGTGACGGCCAAGTTGTTCAGCCAAGCTAAACTCTGCTGGAATGCCTTACTCTCTCCAAC
ACCGCAGCCACTCGTTAACTTGCTAGAGCATCATAAACTGGATTGTTTACCGAACATCAAAGCTGTCATCACTCGGCACC
TACAAGAACTGCCACACTCAGAGTCAGGGTTGAGCTTCACACAACATTTGGCTTTGCAGATATTGAACGAGCAAAACGAA
CCAATCAAAGTGAAAGATTGGTTTCAGAAGAGCCAACAACGAGAACCACTTCCTACTCTCGGTGACGTGATGTTTTATGC
TTTGATGTTGCCACTGGCACAAGCAGAGAATCCCCTGGTCACTGTTGATTCATTGGATAAGAATTGGTGGGAGCAAGAAG
TCAGTATAAGCTCGCGAGGCAAAACTTGTTTGATTGGGAAAGGTGCTTTCATTCAGGACTACTGGAGCGGAGGGATCCAC
AACCACGCACAAAACCGCTGGATATGGAATCACACCCAGCTTTCTACCTTACGCCACTTATCTATTAATTAG

Upstream 100 bases:

>100_bases
GCAACTCAACTTCCCTGCTTTCGTTAGCAGGAACAATCTGTTTTTACCTTCTTTTAAACTTCTAATAAGGCGAGTGTGGA
AGAGATAAGAAAGGTGAAAA

Downstream 100 bases:

>100_bases
ATGAGAGTGATGACAAGCTAGTAACGGTAGCCATCTAGAAACAGCGTAAGGATATCTTCGACGATTTTCTTACGCTGCTC
GACGCTTGGCACCGCTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQSHNSFSINLNQQKSIAKKRLKAIRQNDANALDQVKQFHSQPETLTPESIQLADVQHALARELGLPSWNKLKAHVEELE
SHKLAINNQANPLDTELTTLHVRCGHDIQQQLKTCGFEGDFLPMIDPLCVGPIPSNQKGFVAIRAQYVVDTLLPVMGRKD
SVQEVAQFEQGNIHTLLDQQYERIVFWVEHDAYDQFMLLRGLSLLDNTEGKVIEIIEFNQFPGTERFIGFGQLPAEAIRS
CWQYRKPVTAKLFSQAKLCWNALLSPTPQPLVNLLEHHKLDCLPNIKAVITRHLQELPHSESGLSFTQHLALQILNEQNE
PIKVKDWFQKSQQREPLPTLGDVMFYALMLPLAQAENPLVTVDSLDKNWWEQEVSISSRGKTCLIGKGAFIQDYWSGGIH
NHAQNRWIWNHTQLSTLRHLSIN

Sequences:

>Translated_423_residues
MQSHNSFSINLNQQKSIAKKRLKAIRQNDANALDQVKQFHSQPETLTPESIQLADVQHALARELGLPSWNKLKAHVEELE
SHKLAINNQANPLDTELTTLHVRCGHDIQQQLKTCGFEGDFLPMIDPLCVGPIPSNQKGFVAIRAQYVVDTLLPVMGRKD
SVQEVAQFEQGNIHTLLDQQYERIVFWVEHDAYDQFMLLRGLSLLDNTEGKVIEIIEFNQFPGTERFIGFGQLPAEAIRS
CWQYRKPVTAKLFSQAKLCWNALLSPTPQPLVNLLEHHKLDCLPNIKAVITRHLQELPHSESGLSFTQHLALQILNEQNE
PIKVKDWFQKSQQREPLPTLGDVMFYALMLPLAQAENPLVTVDSLDKNWWEQEVSISSRGKTCLIGKGAFIQDYWSGGIH
NHAQNRWIWNHTQLSTLRHLSIN
>Mature_423_residues
MQSHNSFSINLNQQKSIAKKRLKAIRQNDANALDQVKQFHSQPETLTPESIQLADVQHALARELGLPSWNKLKAHVEELE
SHKLAINNQANPLDTELTTLHVRCGHDIQQQLKTCGFEGDFLPMIDPLCVGPIPSNQKGFVAIRAQYVVDTLLPVMGRKD
SVQEVAQFEQGNIHTLLDQQYERIVFWVEHDAYDQFMLLRGLSLLDNTEGKVIEIIEFNQFPGTERFIGFGQLPAEAIRS
CWQYRKPVTAKLFSQAKLCWNALLSPTPQPLVNLLEHHKLDCLPNIKAVITRHLQELPHSESGLSFTQHLALQILNEQNE
PIKVKDWFQKSQQREPLPTLGDVMFYALMLPLAQAENPLVTVDSLDKNWWEQEVSISSRGKTCLIGKGAFIQDYWSGGIH
NHAQNRWIWNHTQLSTLRHLSIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48282; Mature: 48282

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSHNSFSINLNQQKSIAKKRLKAIRQNDANALDQVKQFHSQPETLTPESIQLADVQHAL
CCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ARELGLPSWNKLKAHVEELESHKLAINNQANPLDTELTTLHVRCGHDIQQQLKTCGFEGD
HHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCC
FLPMIDPLCVGPIPSNQKGFVAIRAQYVVDTLLPVMGRKDSVQEVAQFEQGNIHTLLDQQ
CHHCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
YERIVFWVEHDAYDQFMLLRGLSLLDNTEGKVIEIIEFNQFPGTERFIGFGQLPAEAIRS
HHHEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCCCCHHHHHH
CWQYRKPVTAKLFSQAKLCWNALLSPTPQPLVNLLEHHKLDCLPNIKAVITRHLQELPHS
HHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
ESGLSFTQHLALQILNEQNEPIKVKDWFQKSQQREPLPTLGDVMFYALMLPLAQAENPLV
CCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE
TVDSLDKNWWEQEVSISSRGKTCLIGKGAFIQDYWSGGIHNHAQNRWIWNHTQLSTLRHL
EEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCCCEEECHHHHHHHHHC
SIN
CCC
>Mature Secondary Structure
MQSHNSFSINLNQQKSIAKKRLKAIRQNDANALDQVKQFHSQPETLTPESIQLADVQHAL
CCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ARELGLPSWNKLKAHVEELESHKLAINNQANPLDTELTTLHVRCGHDIQQQLKTCGFEGD
HHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCC
FLPMIDPLCVGPIPSNQKGFVAIRAQYVVDTLLPVMGRKDSVQEVAQFEQGNIHTLLDQQ
CHHCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
YERIVFWVEHDAYDQFMLLRGLSLLDNTEGKVIEIIEFNQFPGTERFIGFGQLPAEAIRS
HHHEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCCCCHHHHHH
CWQYRKPVTAKLFSQAKLCWNALLSPTPQPLVNLLEHHKLDCLPNIKAVITRHLQELPHS
HHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
ESGLSFTQHLALQILNEQNEPIKVKDWFQKSQQREPLPTLGDVMFYALMLPLAQAENPLV
CCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE
TVDSLDKNWWEQEVSISSRGKTCLIGKGAFIQDYWSGGIHNHAQNRWIWNHTQLSTLRHL
EEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCCCEEECHHHHHHHHHC
SIN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA