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The map label for this gene is yjjU [H]

Identifier: 156977870

GI number: 156977870

Start: 1798613

End: 1799485

Strand: Reverse

Name: yjjU [H]

Synonym: VIBHAR_06662

Alternate gene names: 156977870

Gene position: 1799485-1798613 (Counterclockwise)

Preceding gene: 156977871

Following gene: 156977866

Centisome position: 81.65

GC content: 47.31

Gene sequence:

>873_bases
ATGGCAACAAAAGCAATTGTAGTCGAAGGTGGCGCAATGCGTGGCGTCTTTGCTAGCGGCGTATTAGATGCATTCTTAGA
ACAAGACTACAAACCATTTGATTTTGCGATTGGCGTATCGGCAGGGGCTTCAAATTTGATCGGTTATTTGACCGATTACC
CGCATCGTAGCATCAACGTTATTACCAAATTAGCAACCAGCAAACGCTTTTTCGATCCTACCCGTTTTTTGAAGGGCGGT
GATTTGATCGACGTTAAATGGTTGTTTGAAGAGTCAAATCGTTTGTACCCAGTCGATGAAGCGAAACTGTTTGAAGGCAT
CCCTTTCTTAGCGGCGACAACGAACGTAAATACGGGTAAAGCGGATTATTACCGTGTGAACCGCCATAACTTTCATAACG
CGATGGAAGCGACGACGGCACTGCCTATTGCTTACAAACAGACTCCTTGTTTCTCTGGTGGTTGTTATACCGATGGTGGT
GTGGCGGACTCTATTCCTGTTCGAGAAGCATACCGCCGTGGTGCTCGTGACATAACAGTGGTTCTCTCACACCCGTTGGC
TTACGAGAAAAAGCCGGTAAAAACACCTTGGTTAATGAAGAAGTTGTTCGCAGAGCATCCACAGATGGCAGAGGCAATGC
TGCACCGTTCAGAGAACTACAATGAATCGCTAGATTTCATTCGTAACCCTCCAAAAGACACGCACATTCGCGTTATCGCA
CCGCCGGATGAATTCAGTGTACAACGTCTATCAATGCGCCAGACAGTATTGCTAGAAGGTTACGAAATGGGGTTGGAAGC
AGGGCGCGCTCACCTTACCAACCGGGCCGGTGAACACGGCTTAGACAGAGAAAACTGCCACTTCTGTATTTAG

Upstream 100 bases:

>100_bases
AGAATCACATAGACTTCGCCTATCTCAGTAATAAGAATAACCGATTGTTGCTGTAGCACGAATTTCAGTAATCTTTTTAA
CGTATTTATTGGGGGGGAAC

Downstream 100 bases:

>100_bases
CTTTTGATAAGTAAAGAGGTTAGTCCATATCGACTTCAAGCGCTCCCCAAGATGAAGGCTCTCCTTCTCTCGTTAGAGGG
AATAGGCGAGAGTCTGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MATKAIVVEGGAMRGVFASGVLDAFLEQDYKPFDFAIGVSAGASNLIGYLTDYPHRSINVITKLATSKRFFDPTRFLKGG
DLIDVKWLFEESNRLYPVDEAKLFEGIPFLAATTNVNTGKADYYRVNRHNFHNAMEATTALPIAYKQTPCFSGGCYTDGG
VADSIPVREAYRRGARDITVVLSHPLAYEKKPVKTPWLMKKLFAEHPQMAEAMLHRSENYNESLDFIRNPPKDTHIRVIA
PPDEFSVQRLSMRQTVLLEGYEMGLEAGRAHLTNRAGEHGLDRENCHFCI

Sequences:

>Translated_290_residues
MATKAIVVEGGAMRGVFASGVLDAFLEQDYKPFDFAIGVSAGASNLIGYLTDYPHRSINVITKLATSKRFFDPTRFLKGG
DLIDVKWLFEESNRLYPVDEAKLFEGIPFLAATTNVNTGKADYYRVNRHNFHNAMEATTALPIAYKQTPCFSGGCYTDGG
VADSIPVREAYRRGARDITVVLSHPLAYEKKPVKTPWLMKKLFAEHPQMAEAMLHRSENYNESLDFIRNPPKDTHIRVIA
PPDEFSVQRLSMRQTVLLEGYEMGLEAGRAHLTNRAGEHGLDRENCHFCI
>Mature_289_residues
ATKAIVVEGGAMRGVFASGVLDAFLEQDYKPFDFAIGVSAGASNLIGYLTDYPHRSINVITKLATSKRFFDPTRFLKGGD
LIDVKWLFEESNRLYPVDEAKLFEGIPFLAATTNVNTGKADYYRVNRHNFHNAMEATTALPIAYKQTPCFSGGCYTDGGV
ADSIPVREAYRRGARDITVVLSHPLAYEKKPVKTPWLMKKLFAEHPQMAEAMLHRSENYNESLDFIRNPPKDTHIRVIAP
PDEFSVQRLSMRQTVLLEGYEMGLEAGRAHLTNRAGEHGLDRENCHFCI

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=275, Percent_Identity=33.0909090909091, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32523; Mature: 32392

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKAIVVEGGAMRGVFASGVLDAFLEQDYKPFDFAIGVSAGASNLIGYLTDYPHRSINV
CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHH
ITKLATSKRFFDPTRFLKGGDLIDVKWLFEESNRLYPVDEAKLFEGIPFLAATTNVNTGK
HHHHHHCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCEEEECCCCCCC
ADYYRVNRHNFHNAMEATTALPIAYKQTPCFSGGCYTDGGVADSIPVREAYRRGARDITV
CCEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE
VLSHPLAYEKKPVKTPWLMKKLFAEHPQMAEAMLHRSENYNESLDFIRNPPKDTHIRVIA
EEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEE
PPDEFSVQRLSMRQTVLLEGYEMGLEAGRAHLTNRAGEHGLDRENCHFCI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATKAIVVEGGAMRGVFASGVLDAFLEQDYKPFDFAIGVSAGASNLIGYLTDYPHRSINV
CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHH
ITKLATSKRFFDPTRFLKGGDLIDVKWLFEESNRLYPVDEAKLFEGIPFLAATTNVNTGK
HHHHHHCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCEEEECCCCCCC
ADYYRVNRHNFHNAMEATTALPIAYKQTPCFSGGCYTDGGVADSIPVREAYRRGARDITV
CCEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE
VLSHPLAYEKKPVKTPWLMKKLFAEHPQMAEAMLHRSENYNESLDFIRNPPKDTHIRVIA
EEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEE
PPDEFSVQRLSMRQTVLLEGYEMGLEAGRAHLTNRAGEHGLDRENCHFCI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]