Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977856

Identifier: 156977856

GI number: 156977856

Start: 1786702

End: 1787145

Strand: Reverse

Name: 156977856

Synonym: VIBHAR_06647

Alternate gene names: NA

Gene position: 1787145-1786702 (Counterclockwise)

Preceding gene: 156977857

Following gene: 156977855

Centisome position: 81.09

GC content: 41.89

Gene sequence:

>444_bases
ATGAGTTGTTCTATTGCCAAGAGAAAGCAAAGGATTATTGGCGGTTTCATCGATCTGATGATCGTAACGGGATTCGTGTT
GCTGATCGCGTTGACCATCAATTCATTTGTCAATGGCTTTGAACTCTCCTTGAGTGAAAACCTTCAGTTAGTAAAAGATA
CCAAGGCTAGCTATGTGCTAACCATACCTATGTTGATGCTAGTGAATTGGAATTTGCTTAGGGAAGGGCAAACCATAGGT
ATGCGGCTCGTTGGTATTAAAGTCGTTATGAAGAACGGTCACGATACGACGAAAGTCACTGCTTCACTTCGATTGTGTCT
AAGCTATTTGATTGAGATGCTTATACCATTTACTTCACTAGTGAACATCGTTTTGCTTTTTTGCCATCCAGAGCGACGTT
TGTTGCACGACATGCTTTCGGGCACCAAAGTCGTCAATTGCTAA

Upstream 100 bases:

>100_bases
ATCTCACTTCTGAGAGAGCGTCACAAATATAACGTCTCTTAATTGAGCATGGTCAATCTCGTCCCTAGAATGCATCAGAT
TGCATTTGAGGGGATTAGGT

Downstream 100 bases:

>100_bases
GCCACTCGCTCATCCTGCATTACAATCTTTGTTTCATTCAGAGTTGCGATCGAGTCAACTTTTCATATCTCCCTTCCTAC
AACTACACTTACTTCAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSCSIAKRKQRIIGGFIDLMIVTGFVLLIALTINSFVNGFELSLSENLQLVKDTKASYVLTIPMLMLVNWNLLREGQTIG
MRLVGIKVVMKNGHDTTKVTASLRLCLSYLIEMLIPFTSLVNIVLLFCHPERRLLHDMLSGTKVVNC

Sequences:

>Translated_147_residues
MSCSIAKRKQRIIGGFIDLMIVTGFVLLIALTINSFVNGFELSLSENLQLVKDTKASYVLTIPMLMLVNWNLLREGQTIG
MRLVGIKVVMKNGHDTTKVTASLRLCLSYLIEMLIPFTSLVNIVLLFCHPERRLLHDMLSGTKVVNC
>Mature_146_residues
SCSIAKRKQRIIGGFIDLMIVTGFVLLIALTINSFVNGFELSLSENLQLVKDTKASYVLTIPMLMLVNWNLLREGQTIGM
RLVGIKVVMKNGHDTTKVTASLRLCLSYLIEMLIPFTSLVNIVLLFCHPERRLLHDMLSGTKVVNC

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16468; Mature: 16337

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCSIAKRKQRIIGGFIDLMIVTGFVLLIALTINSFVNGFELSLSENLQLVKDTKASYVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCHH
TIPMLMLVNWNLLREGQTIGMRLVGIKVVMKNGHDTTKVTASLRLCLSYLIEMLIPFTSL
HHHHHHHHHHHHHHCCCHHCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VNIVLLFCHPERRLLHDMLSGTKVVNC
HHHHHHHCCCHHHHHHHHHCCCEECCC
>Mature Secondary Structure 
SCSIAKRKQRIIGGFIDLMIVTGFVLLIALTINSFVNGFELSLSENLQLVKDTKASYVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCHH
TIPMLMLVNWNLLREGQTIGMRLVGIKVVMKNGHDTTKVTASLRLCLSYLIEMLIPFTSL
HHHHHHHHHHHHHHCCCHHCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VNIVLLFCHPERRLLHDMLSGTKVVNC
HHHHHHHCCCHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA