| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977840
Identifier: 156977840
GI number: 156977840
Start: 1770685
End: 1771140
Strand: Direct
Name: 156977840
Synonym: VIBHAR_06628
Alternate gene names: NA
Gene position: 1770685-1771140 (Clockwise)
Preceding gene: 156977838
Following gene: 156977842
Centisome position: 80.34
GC content: 42.98
Gene sequence:
>456_bases ATGTCTCCCGAAGAATGTAAAACCGCGGACTGGTACAACGTCGGCTACCAAAATGGCTTAAACGGCAACGCGCCAAGCAT TATTAATAGTTATACCGAAGATTGTAACGAGGCCGGGGTGACTCCAAATCGCGCGCAGTGGAAAGAAGGCTTCGATAAAG GGACTATCATCTATTGCTCTCCAGACAACAGTTACACCGTGGGAAGTGAAGGCAGAGAATATTATGGTGTATGCAGCAAC AAGCAATTTCTTGAAAATTACCAATTAGGTCGTCAGGAATATCAACGCCAACAGCGTATCCAACAAATCGATACCGAAAT CTCGGTTATCGACAATCAGCTAGACAGCAATCCTGATAAAGAAAATGCTAAGCGATTAAAAGAAAAGAGAAAAAGGCTAG CAGATGAGCGCTCACAACTGCTCACACCAACCATTAATTTCAATTTGAACTTCTAA
Upstream 100 bases:
>100_bases TTTTACACTCTTTGGTTGGAATCAGTTTAAAGGATAATAACGGATGAAAAGAGCACTACTCCCCTTAACGTTAATCACTT TGCTCTCTGGCTGTGCCAGC
Downstream 100 bases:
>100_bases AACCGCTGCATTTAGTTTGCTAAAAATCCAAGGCCCTAGCTAAGCTCTAGGGTCATAAATTGGCTGTTCGGATCGAGTTC GTAATCCCCGAACGGCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSPEECKTADWYNVGYQNGLNGNAPSIINSYTEDCNEAGVTPNRAQWKEGFDKGTIIYCSPDNSYTVGSEGREYYGVCSN KQFLENYQLGRQEYQRQQRIQQIDTEISVIDNQLDSNPDKENAKRLKEKRKRLADERSQLLTPTINFNLNF
Sequences:
>Translated_151_residues MSPEECKTADWYNVGYQNGLNGNAPSIINSYTEDCNEAGVTPNRAQWKEGFDKGTIIYCSPDNSYTVGSEGREYYGVCSN KQFLENYQLGRQEYQRQQRIQQIDTEISVIDNQLDSNPDKENAKRLKEKRKRLADERSQLLTPTINFNLNF >Mature_150_residues SPEECKTADWYNVGYQNGLNGNAPSIINSYTEDCNEAGVTPNRAQWKEGFDKGTIIYCSPDNSYTVGSEGREYYGVCSNK QFLENYQLGRQEYQRQQRIQQIDTEISVIDNQLDSNPDKENAKRLKEKRKRLADERSQLLTPTINFNLNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17420; Mature: 17289
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEECKTADWYNVGYQNGLNGNAPSIINSYTEDCNEAGVTPNRAQWKEGFDKGTIIYCS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEC PDNSYTVGSEGREYYGVCSNKQFLENYQLGRQEYQRQQRIQQIDTEISVIDNQLDSNPDK CCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ENAKRLKEKRKRLADERSQLLTPTINFNLNF HHHHHHHHHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure SPEECKTADWYNVGYQNGLNGNAPSIINSYTEDCNEAGVTPNRAQWKEGFDKGTIIYCS CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEC PDNSYTVGSEGREYYGVCSNKQFLENYQLGRQEYQRQQRIQQIDTEISVIDNQLDSNPDK CCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ENAKRLKEKRKRLADERSQLLTPTINFNLNF HHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA