| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977835
Identifier: 156977835
GI number: 156977835
Start: 1766391
End: 1766819
Strand: Reverse
Name: 156977835
Synonym: VIBHAR_06623
Alternate gene names: NA
Gene position: 1766819-1766391 (Counterclockwise)
Preceding gene: 156977836
Following gene: 156977834
Centisome position: 80.16
GC content: 46.85
Gene sequence:
>429_bases ATGAAGATGTTTAAACGAGCCACTCTCGCTGGTCGGCCAAGCGATATGGTGGAGGACACGTCCGCTATCCGCCTGCGATT ATCTGCAAAAAATGGACTGAAAAGCTTGGTGTGTTTTATCGCATTGGTCGTTATTGCGCTCTATGTTCGAGACAGCTTTA TTCGTCCGACATTGGGTGATGTTCTCGTTGTGGTTTGGCTCTACTACTTTCTTGCAAGCTTGTTCTTCATGCCCGTTAAC TGGCTGGTTTCACAGGTGGTGTTGATTGCGTTTGCTGTTGAGTTAGGGCAACTATTACAGGTCGCAGTTTGGCTTGGTAT CGAATCTTCATCGCCTCTGGCTGTGATTTTGGGCGCCACATTTGATTGGAAAGATCTGCTGGCTTATTGCATCGGAGGTC TACTGTGTTGGTGGATAGAAAAGAAATGA
Upstream 100 bases:
>100_bases TTGCTGTGTTTCGCGATTTTGAGCTTCACTATGGTTATTACACGCAACATCGACTGGTACGCACGAAATAAGAAAGCAGA AGAAAGTGCAAAGGCGAATC
Downstream 100 bases:
>100_bases AAATCGAGATGAAAGCCATTGTGCTACCAGACCGACTCCACCATTCCAAACGAGGTATTCGTAAGAGGCTCAAAATCAGT TTACTCAAGCGCGTGTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKMFKRATLAGRPSDMVEDTSAIRLRLSAKNGLKSLVCFIALVVIALYVRDSFIRPTLGDVLVVVWLYYFLASLFFMPVN WLVSQVVLIAFAVELGQLLQVAVWLGIESSSPLAVILGATFDWKDLLAYCIGGLLCWWIEKK
Sequences:
>Translated_142_residues MKMFKRATLAGRPSDMVEDTSAIRLRLSAKNGLKSLVCFIALVVIALYVRDSFIRPTLGDVLVVVWLYYFLASLFFMPVN WLVSQVVLIAFAVELGQLLQVAVWLGIESSSPLAVILGATFDWKDLLAYCIGGLLCWWIEKK >Mature_142_residues MKMFKRATLAGRPSDMVEDTSAIRLRLSAKNGLKSLVCFIALVVIALYVRDSFIRPTLGDVLVVVWLYYFLASLFFMPVN WLVSQVVLIAFAVELGQLLQVAVWLGIESSSPLAVILGATFDWKDLLAYCIGGLLCWWIEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15917; Mature: 15917
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMFKRATLAGRPSDMVEDTSAIRLRLSAKNGLKSLVCFIALVVIALYVRDSFIRPTLGD CCCHHHHHHCCCCHHHHHCHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH VLVVVWLYYFLASLFFMPVNWLVSQVVLIAFAVELGQLLQVAVWLGIESSSPLAVILGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC FDWKDLLAYCIGGLLCWWIEKK CCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKMFKRATLAGRPSDMVEDTSAIRLRLSAKNGLKSLVCFIALVVIALYVRDSFIRPTLGD CCCHHHHHHCCCCHHHHHCHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH VLVVVWLYYFLASLFFMPVNWLVSQVVLIAFAVELGQLLQVAVWLGIESSSPLAVILGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC FDWKDLLAYCIGGLLCWWIEKK CCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA