| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977813
Identifier: 156977813
GI number: 156977813
Start: 1748780
End: 1751236
Strand: Direct
Name: 156977813
Synonym: VIBHAR_06601
Alternate gene names: NA
Gene position: 1748780-1751236 (Clockwise)
Preceding gene: 156977812
Following gene: 156977814
Centisome position: 79.35
GC content: 50.47
Gene sequence:
>2457_bases ATGAAACTAAAAAGAACTCTTATCTCTACCGCTATACTCGCTGCCATGTTTGGTCTTGCTGGTTGTAACAGCGATGACGA CAACAGCAAATCTGGTACTCCATCCCTCGACACCACGCTAACCCAGTACGTCAATCCATTGATTGGTACAGGTGCAGATG GTCACACCTTCCCTGGGGCGGTTGTGCCTTACGGTTTGGTGCAACTTTCTCCTGATACCGAAATGGAAGGCTGGGGCTCT GCTGCCGGTTACTTCGACCACGGCAAGCTGACTGAAATCCCAGTGTATGGTTTTTCCCACACTCACCTTTCTGGCACAGG CATTACCGACCTTGGTGACATCTTAGTTCTGCCTTTCACCAAGAAAGAAAACGCCGTTTTCAACACCTTCGATAAAGACA ACGAAACCGCAGAAGCGGGCTACTACGCAGTTGAACTGAACAAAGGCGAAATCAAAGCTGAGCTAACTACCACGCAACGT GTTGGCTTCCACCGCTACACCTTCAAAGAAGGCACGACACCACACATCAAGTTCGATTTAGACCACACTCTCAACAAAGG TCACTTCAACAACCGCACCATGAAGGGTGACTTAGAGTTCATCGACGCTTACACCATCCGCGGTTTACGTAGCTCGAACG GCTGGGCGAACAACCAGCACGTCTACTTCTACGCCACCTTCAACCAGCCTATTGTCAAAGCCATCGCTTTAGTTGACGGC GCAGAAACGGAAATCGATGTAAACAACGACAACATCGACGCAGTGAAAACCATCGCTTACCTAGAATTCGCACCATCATC AACACCGCTAGAAATCCAAGTAGGCTTGTCACCAACAGGCACAGAAGGTGCGGAGAAGAACTTAGAAGCAGAAGCGAAAG ACGTGTCATTTGATACTGCACGTGCTCAAGCCAACGACGCATGGCACCAAGAGCTTAGCCGCATGATGGTATCTGGCGGC ACGGAAGATCAGAAAGAGATCTTCTACACCGCGCTTTACCACGCTTCTATCGCGCCAATGATTTTCCAAGATGTCGACGG TCAATACCCTGCGATGCGTACTCGTATTCAAAAAGACGCGGGCGACACACCAAACTACTCTGTGTACTCCATGTGGGATA CCTTCCGCGCTGCGCATCCACTGAAAACCATCATCGACCCAGAACGTGCCGAAGAGTTTGCCAACGACCTGATTCGTAAA TACGAAGACGGTGGCATCTTGCCGAAATGGGAGCTGCACAGCCACTACACGGGCACTATGATCGGCTTCCCTGCGGTCTC TATCATTGCTGACGCGATGGCGAAAGGCTTAGACATCGACCCACAACTGGCCAAAGAAGCGGCTGAATTTACGGTGCGTT ACCACGAGGCATCTGAATTCCCAGATTGGACGGAAGACAACAACATCGGCGCAGCAAACGTTGTGCAAGTGAAGGTGTAC GAAGAAAACGGCTTTGTTCATCACGGCTACTGGAACAGTGCGTCTTACACGCTTGAGTTTGCATATGGCGACTGGGCAAT GGCCGAAATCGCGCGCATGGCTGGCGATGTAAAACTGCAAGAAGAGTTTATGACTCGCGCCGACAACTGGCTTAACCATT GGGATGCAGAGACGGGCTTCTTACGTCCAAAGAACCATCCGATGAGTTCATCACCAAACAAACCGCCTTTGGAGTTCAAC CAACCGATTGATGAAGATCGTTTGGATGGGTGTGAAATGGTTGAATGGCCTGAAGGCTCAGGCGTGATGAAAGAGAAATG CCCGCTGCTACCATTCGACCCTTACTACGTGGACGAGTTTGCCTACACCGAAGGGAACGCGTGGCAATGGAAGTTCCAAC CAATGCACGATTTCAACCGTCTGAAACAAGAAATCTACCAAGCAGACTTGGCACAAGGCAAAGACACCACGCCAGAGAAA GCCTTCCGTGAAGACTTGGACGAGCTATTTAATGCACGTTCTTCAAACACAGGTGAAGAGCTGCCAGACCTAACGGGTTA CATCGGTCAGTACATGCACGGTAACGAGCCATCACACCACATTCCTTACCTATACGCGCTAACGGATGAGCCATGGAAAG CGCAAGAGTACCTAGACCGCATCATGTCAGAGATGTACACCAGCGAGCCAACTGGTTTGATTGGTAACGAAGACGTAGGT CAGATGAGCTCTTGGTACTTGATGTCGGCAATGGGCTTCTACCAAGTGACGCCTGCAGATCCGGTCTACACCATCGGTCG CCCTATGTTTGATGAAATCACCATTCCAGTGGAAGGCGGCGAATTCACAGTCATCGCAGACAACAACAGCCCACACAACA AGTACGTGAAGTCTGTAACCATCAACGGTAAACCGCTGGATGCCAACTTCACCTTCAAGCACAGCGAAATCAAAGCGGGC GGCGAGCTTCAATTCGTCATGACGGGTGACAAGCAAGAAGCGCTTCAAGCTCAGTAA
Upstream 100 bases:
>100_bases GGCCTCAAAGCGATAAGTGCGGCAGAGTTCCGGTGAAAAGATGTGGGGATCCCTCAGCATCTAGCCCCCTAAAAAACTTC ACTTCAGTGGAACCATAAAA
Downstream 100 bases:
>100_bases CGTTTTATGTAATTCGTGTTTAAAGAATAAGCAGATAGATTAACTCAGTGGCAGGAAGTGATCCGCTTCCTGCCTAAGGA ATCAATATTATGAACTTTAC
Product: alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MKLKRTLISTAILAAMFGLAGCNSDDDNSKSGTPSLDTTLTQYVNPLIGTGADGHTFPGAVVPYGLVQLSPDTEMEGWGS AAGYFDHGKLTEIPVYGFSHTHLSGTGITDLGDILVLPFTKKENAVFNTFDKDNETAEAGYYAVELNKGEIKAELTTTQR VGFHRYTFKEGTTPHIKFDLDHTLNKGHFNNRTMKGDLEFIDAYTIRGLRSSNGWANNQHVYFYATFNQPIVKAIALVDG AETEIDVNNDNIDAVKTIAYLEFAPSSTPLEIQVGLSPTGTEGAEKNLEAEAKDVSFDTARAQANDAWHQELSRMMVSGG TEDQKEIFYTALYHASIAPMIFQDVDGQYPAMRTRIQKDAGDTPNYSVYSMWDTFRAAHPLKTIIDPERAEEFANDLIRK YEDGGILPKWELHSHYTGTMIGFPAVSIIADAMAKGLDIDPQLAKEAAEFTVRYHEASEFPDWTEDNNIGAANVVQVKVY EENGFVHHGYWNSASYTLEFAYGDWAMAEIARMAGDVKLQEEFMTRADNWLNHWDAETGFLRPKNHPMSSSPNKPPLEFN QPIDEDRLDGCEMVEWPEGSGVMKEKCPLLPFDPYYVDEFAYTEGNAWQWKFQPMHDFNRLKQEIYQADLAQGKDTTPEK AFREDLDELFNARSSNTGEELPDLTGYIGQYMHGNEPSHHIPYLYALTDEPWKAQEYLDRIMSEMYTSEPTGLIGNEDVG QMSSWYLMSAMGFYQVTPADPVYTIGRPMFDEITIPVEGGEFTVIADNNSPHNKYVKSVTINGKPLDANFTFKHSEIKAG GELQFVMTGDKQEALQAQ
Sequences:
>Translated_818_residues MKLKRTLISTAILAAMFGLAGCNSDDDNSKSGTPSLDTTLTQYVNPLIGTGADGHTFPGAVVPYGLVQLSPDTEMEGWGS AAGYFDHGKLTEIPVYGFSHTHLSGTGITDLGDILVLPFTKKENAVFNTFDKDNETAEAGYYAVELNKGEIKAELTTTQR VGFHRYTFKEGTTPHIKFDLDHTLNKGHFNNRTMKGDLEFIDAYTIRGLRSSNGWANNQHVYFYATFNQPIVKAIALVDG AETEIDVNNDNIDAVKTIAYLEFAPSSTPLEIQVGLSPTGTEGAEKNLEAEAKDVSFDTARAQANDAWHQELSRMMVSGG TEDQKEIFYTALYHASIAPMIFQDVDGQYPAMRTRIQKDAGDTPNYSVYSMWDTFRAAHPLKTIIDPERAEEFANDLIRK YEDGGILPKWELHSHYTGTMIGFPAVSIIADAMAKGLDIDPQLAKEAAEFTVRYHEASEFPDWTEDNNIGAANVVQVKVY EENGFVHHGYWNSASYTLEFAYGDWAMAEIARMAGDVKLQEEFMTRADNWLNHWDAETGFLRPKNHPMSSSPNKPPLEFN QPIDEDRLDGCEMVEWPEGSGVMKEKCPLLPFDPYYVDEFAYTEGNAWQWKFQPMHDFNRLKQEIYQADLAQGKDTTPEK AFREDLDELFNARSSNTGEELPDLTGYIGQYMHGNEPSHHIPYLYALTDEPWKAQEYLDRIMSEMYTSEPTGLIGNEDVG QMSSWYLMSAMGFYQVTPADPVYTIGRPMFDEITIPVEGGEFTVIADNNSPHNKYVKSVTINGKPLDANFTFKHSEIKAG GELQFVMTGDKQEALQAQ >Mature_818_residues MKLKRTLISTAILAAMFGLAGCNSDDDNSKSGTPSLDTTLTQYVNPLIGTGADGHTFPGAVVPYGLVQLSPDTEMEGWGS AAGYFDHGKLTEIPVYGFSHTHLSGTGITDLGDILVLPFTKKENAVFNTFDKDNETAEAGYYAVELNKGEIKAELTTTQR VGFHRYTFKEGTTPHIKFDLDHTLNKGHFNNRTMKGDLEFIDAYTIRGLRSSNGWANNQHVYFYATFNQPIVKAIALVDG AETEIDVNNDNIDAVKTIAYLEFAPSSTPLEIQVGLSPTGTEGAEKNLEAEAKDVSFDTARAQANDAWHQELSRMMVSGG TEDQKEIFYTALYHASIAPMIFQDVDGQYPAMRTRIQKDAGDTPNYSVYSMWDTFRAAHPLKTIIDPERAEEFANDLIRK YEDGGILPKWELHSHYTGTMIGFPAVSIIADAMAKGLDIDPQLAKEAAEFTVRYHEASEFPDWTEDNNIGAANVVQVKVY EENGFVHHGYWNSASYTLEFAYGDWAMAEIARMAGDVKLQEEFMTRADNWLNHWDAETGFLRPKNHPMSSSPNKPPLEFN QPIDEDRLDGCEMVEWPEGSGVMKEKCPLLPFDPYYVDEFAYTEGNAWQWKFQPMHDFNRLKQEIYQADLAQGKDTTPEK AFREDLDELFNARSSNTGEELPDLTGYIGQYMHGNEPSHHIPYLYALTDEPWKAQEYLDRIMSEMYTSEPTGLIGNEDVG QMSSWYLMSAMGFYQVTPADPVYTIGRPMFDEITIPVEGGEFTVIADNNSPHNKYVKSVTINGKPLDANFTFKHSEIKAG GELQFVMTGDKQEALQAQ
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91631; Mature: 91631
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKRTLISTAILAAMFGLAGCNSDDDNSKSGTPSLDTTLTQYVNPLIGTGADGHTFPGA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH VVPYGLVQLSPDTEMEGWGSAAGYFDHGKLTEIPVYGFSHTHLSGTGITDLGDILVLPFT HHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCEEEEEEC KKENAVFNTFDKDNETAEAGYYAVELNKGEIKAELTTTQRVGFHRYTFKEGTTPHIKFDL CCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHCCCEEEEECCCCCCEEEEEC DHTLNKGHFNNRTMKGDLEFIDAYTIRGLRSSNGWANNQHVYFYATFNQPIVKAIALVDG CCCCCCCCCCCCEEECCCEEEEHHHCCCEECCCCCCCCCEEEEEEECCCHHHHHHHHCCC AETEIDVNNDNIDAVKTIAYLEFAPSSTPLEIQVGLSPTGTEGAEKNLEAEAKDVSFDTA CCCEEECCCCCCHHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCHHH RAQANDAWHQELSRMMVSGGTEDQKEIFYTALYHASIAPMIFQDVDGQYPAMRTRIQKDA HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC GDTPNYSVYSMWDTFRAAHPLKTIIDPERAEEFANDLIRKYEDGGILPKWELHSHYTGTM CCCCCEEEEEHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEE IGFPAVSIIADAMAKGLDIDPQLAKEAAEFTVRYHEASEFPDWTEDNNIGAANVVQVKVY EHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEEEE EENGFVHHGYWNSASYTLEFAYGDWAMAEIARMAGDVKLQEEFMTRADNWLNHWDAETGF CCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC LRPKNHPMSSSPNKPPLEFNQPIDEDRLDGCEMVEWPEGSGVMKEKCPLLPFDPYYVDEF CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCCCHHHCCCCCCCCCCEECCE AYTEGNAWQWKFQPMHDFNRLKQEIYQADLAQGKDTTPEKAFREDLDELFNARSSNTGEE EECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHH LPDLTGYIGQYMHGNEPSHHIPYLYALTDEPWKAQEYLDRIMSEMYTSEPTGLIGNEDVG CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH QMSSWYLMSAMGFYQVTPADPVYTIGRPMFDEITIPVEGGEFTVIADNNSPHNKYVKSVT HHHHHHHHHHCCCEEECCCCCCEECCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEEE INGKPLDANFTFKHSEIKAGGELQFVMTGDKQEALQAQ ECCCCCCCCEEEECCEECCCCEEEEEEECCHHHHHCCC >Mature Secondary Structure MKLKRTLISTAILAAMFGLAGCNSDDDNSKSGTPSLDTTLTQYVNPLIGTGADGHTFPGA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH VVPYGLVQLSPDTEMEGWGSAAGYFDHGKLTEIPVYGFSHTHLSGTGITDLGDILVLPFT HHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCEEEEEEC KKENAVFNTFDKDNETAEAGYYAVELNKGEIKAELTTTQRVGFHRYTFKEGTTPHIKFDL CCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHCCCEEEEECCCCCCEEEEEC DHTLNKGHFNNRTMKGDLEFIDAYTIRGLRSSNGWANNQHVYFYATFNQPIVKAIALVDG CCCCCCCCCCCCEEECCCEEEEHHHCCCEECCCCCCCCCEEEEEEECCCHHHHHHHHCCC AETEIDVNNDNIDAVKTIAYLEFAPSSTPLEIQVGLSPTGTEGAEKNLEAEAKDVSFDTA CCCEEECCCCCCHHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCHHH RAQANDAWHQELSRMMVSGGTEDQKEIFYTALYHASIAPMIFQDVDGQYPAMRTRIQKDA HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC GDTPNYSVYSMWDTFRAAHPLKTIIDPERAEEFANDLIRKYEDGGILPKWELHSHYTGTM CCCCCEEEEEHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEE IGFPAVSIIADAMAKGLDIDPQLAKEAAEFTVRYHEASEFPDWTEDNNIGAANVVQVKVY EHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEEEE EENGFVHHGYWNSASYTLEFAYGDWAMAEIARMAGDVKLQEEFMTRADNWLNHWDAETGF CCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC LRPKNHPMSSSPNKPPLEFNQPIDEDRLDGCEMVEWPEGSGVMKEKCPLLPFDPYYVDEF CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCCCHHHCCCCCCCCCCEECCE AYTEGNAWQWKFQPMHDFNRLKQEIYQADLAQGKDTTPEKAFREDLDELFNARSSNTGEE EECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHH LPDLTGYIGQYMHGNEPSHHIPYLYALTDEPWKAQEYLDRIMSEMYTSEPTGLIGNEDVG CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH QMSSWYLMSAMGFYQVTPADPVYTIGRPMFDEITIPVEGGEFTVIADNNSPHNKYVKSVT HHHHHHHHHHCCCEEECCCCCCEECCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEEE INGKPLDANFTFKHSEIKAGGELQFVMTGDKQEALQAQ ECCCCCCCCEEEECCEECCCCEEEEEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA