Click here to switch to the map view.

The map label for this gene is katE [C]

Identifier: 156977792

GI number: 156977792

Start: 1727081

End: 1728595

Strand: Reverse

Name: katE [C]

Synonym: VIBHAR_06580

Alternate gene names: 156977792

Gene position: 1728595-1727081 (Counterclockwise)

Preceding gene: 156977795

Following gene: 156977791

Centisome position: 78.43

GC content: 45.54

Gene sequence:

>1515_bases
ATGCAGATGTCAAAAAGCTTTTTATTAATTACAGTTGGCTTAGCCAGCACATCTCTACAGGCGCAAACCCTGACAAGAGA
CAATGGTGCACCAGTTGGTGATAACCAAAACTCTATAACGGCAGGTGAAAACGGCAGTGTATTACTGCAAGACGTTCATC
TGATCCAAAAATTGCAGCGTTTTGCTCGTGAGCGTATTCCTGAGCGTGTCGTGCATGCTCGTGGTACGGGGGCTCACGGT
GAATTCGTTGCATCTGGTGATTTTAGTGATCTAACGGTTTCCGCTCCTTTTACTAACAAAGGAAAGGTAACTCCTGTTTT
CGTTCGATTTTCGACCGTTATTCACTCGAAAGGCTCACCAGAGACACTTCGTGATCCACGAGGTTTCGCAACCAAATTTT
ATACTGAGCAAGGAAACTGGGACTTAGTAGGTAACAACCTACCTGTGTTCTTTATCCGTGATTCGATTAAGTTTCCAGAT
ATGGTGCATTCTCTAAAACCGTCACCGGTAACGAATGTACAAGACCCAAATCGTTTTTTTGATTTCTTCAGTCATGAGCC
GAGTGCGACCAACATGTTGACTTGGGTTTACAGTAACCTAGGGACGCCTGCGAGCTACCGTACAATGGATGGATTTGGCG
TTCATGCATACAAGTGGATCAATAAGCAAGGCGATGTGAACTATGTGAAGTTCCAATGGAAGAGCCAACAGGGTATTGAA
AGTCTTCGTCCTGATGAGGTCACCGCTATGCAGGGTAAGGACTTTAACCATTTGACCAATGATCTGTACGAGGAAATTGG
GCGTGGTAATTACCCTAAATGGGATCTTTACGTGAAGGTGTTATCACTAGAAGCGTTGAGCAAGCTCGACTACAACGGCT
TAGATGCGACCAAAGTGTGGTTGAACGTACCAGATAAAAAAGTCGGTACTATGACGTTGAATCGACTGCCTGAAAGTTTC
TTTTTAGACACCGAACAGTCGGCATTTGCGCCTTCAAACCTGATTCCTGGTATCGAGCCTTCTGAAGATCGCTTGCTGCA
AGGTCGCTTGTTTGCGTACGCGGATACACAGCTATATCGCTTGGGTGCGAATTTATTCCAACTGCCAGTGAATCGTCCGT
TAGCTCCGGTAAATAACCACAATCAAAATGGTGTGAGCAACAATGCTCAGGCAGCAAATGGGGACGTAAACTACGAGCCA
AGCCGTCAGCTTGAACTGGCAGAAGACACGCAGTTTAAAGCGGTTGAAACCAAGTTGGCTGGTACTGTTCAACAAAAAGC
GATTAGCAACCCACGTAATTTCTACCAAGCGGGTGTGTTGTACCGCAGCATGAACGAGCAAGACAAGAAAGACTTGATTG
CTAACCTTGCTGGTGATCTGAACAAGGTAATGGATAAAGACGTCAAGGCAACGATGGTGAGCTATTTCTATCGTGCAGAC
AAAGAGTACGGTACGCGCCTAGCAAAAGCGACCGACACAAATCTCTCGCAAGTTAAAAACAAAGCGATGATGTAG

Upstream 100 bases:

>100_bases
GTAATCATTGAAGATATATTCTCGGTGGGCAGAAAAGAGCTTTTGAATACCCATTTGCCATATGAATGGCTAAATGGTTA
GCACGCATTGGAGAGCAACC

Downstream 100 bases:

>100_bases
GCGTAAAGTTTTGGCCTACGGGAGATAAATCTGCTCTTTTCTGCCCGGAAAACAGGGCTCCTGTAGGCCATTCTTGATTG
GATGAGGGTGAGTCGATGAA

Product: catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MQMSKSFLLITVGLASTSLQAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHG
EFVASGDFSDLTVSAPFTNKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPD
MVHSLKPSPVTNVQDPNRFFDFFSHEPSATNMLTWVYSNLGTPASYRTMDGFGVHAYKWINKQGDVNYVKFQWKSQQGIE
SLRPDEVTAMQGKDFNHLTNDLYEEIGRGNYPKWDLYVKVLSLEALSKLDYNGLDATKVWLNVPDKKVGTMTLNRLPESF
FLDTEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLAPVNNHNQNGVSNNAQAANGDVNYEP
SRQLELAEDTQFKAVETKLAGTVQQKAISNPRNFYQAGVLYRSMNEQDKKDLIANLAGDLNKVMDKDVKATMVSYFYRAD
KEYGTRLAKATDTNLSQVKNKAMM

Sequences:

>Translated_504_residues
MQMSKSFLLITVGLASTSLQAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHG
EFVASGDFSDLTVSAPFTNKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPD
MVHSLKPSPVTNVQDPNRFFDFFSHEPSATNMLTWVYSNLGTPASYRTMDGFGVHAYKWINKQGDVNYVKFQWKSQQGIE
SLRPDEVTAMQGKDFNHLTNDLYEEIGRGNYPKWDLYVKVLSLEALSKLDYNGLDATKVWLNVPDKKVGTMTLNRLPESF
FLDTEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLAPVNNHNQNGVSNNAQAANGDVNYEP
SRQLELAEDTQFKAVETKLAGTVQQKAISNPRNFYQAGVLYRSMNEQDKKDLIANLAGDLNKVMDKDVKATMVSYFYRAD
KEYGTRLAKATDTNLSQVKNKAMM
>Mature_504_residues
MQMSKSFLLITVGLASTSLQAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHG
EFVASGDFSDLTVSAPFTNKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPD
MVHSLKPSPVTNVQDPNRFFDFFSHEPSATNMLTWVYSNLGTPASYRTMDGFGVHAYKWINKQGDVNYVKFQWKSQQGIE
SLRPDEVTAMQGKDFNHLTNDLYEEIGRGNYPKWDLYVKVLSLEALSKLDYNGLDATKVWLNVPDKKVGTMTLNRLPESF
FLDTEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLAPVNNHNQNGVSNNAQAANGDVNYEP
SRQLELAEDTQFKAVETKLAGTVQQKAISNPRNFYQAGVLYRSMNEQDKKDLIANLAGDLNKVMDKDVKATMVSYFYRAD
KEYGTRLAKATDTNLSQVKNKAMM

Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=488, Percent_Identity=40.7786885245902, Blast_Score=364, Evalue=1e-100,
Organism=Escherichia coli, GI48994891, Length=489, Percent_Identity=38.241308793456, Blast_Score=341, Evalue=8e-95,
Organism=Caenorhabditis elegans, GI25147792, Length=477, Percent_Identity=38.9937106918239, Blast_Score=373, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI71998444, Length=482, Percent_Identity=39.8340248962656, Blast_Score=373, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI25151141, Length=473, Percent_Identity=38.9006342494715, Blast_Score=370, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6320462, Length=489, Percent_Identity=38.4458077709611, Blast_Score=329, Evalue=6e-91,
Organism=Saccharomyces cerevisiae, GI6321525, Length=529, Percent_Identity=35.3497164461248, Blast_Score=299, Evalue=7e-82,
Organism=Drosophila melanogaster, GI17981717, Length=453, Percent_Identity=40.6181015452539, Blast_Score=352, Evalue=2e-97,
Organism=Drosophila melanogaster, GI19920968, Length=479, Percent_Identity=36.9519832985386, Blast_Score=333, Evalue=2e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002226
- InterPro:   IPR020835
- InterPro:   IPR010582
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 56452; Mature: 56452

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMSKSFLLITVGLASTSLQAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQR
CCCCCCEEEEEEECCCCCCCHHEEECCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHH
FARERIPERVVHARGTGAHGEFVASGDFSDLTVSAPFTNKGKVTPVFVRFSTVIHSKGSP
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEEEEEEEHHCCCCCC
ETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFF
CHHCCCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHH
DFFSHEPSATNMLTWVYSNLGTPASYRTMDGFGVHAYKWINKQGDVNYVKFQWKSQQGIE
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHCHH
SLRPDEVTAMQGKDFNHLTNDLYEEIGRGNYPKWDLYVKVLSLEALSKLDYNGLDATKVW
HCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEE
LNVPDKKVGTMTLNRLPESFFLDTEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYR
EECCCCCCCHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECHHHHH
LGANLFQLPVNRPLAPVNNHNQNGVSNNAQAANGDVNYEPSRQLELAEDTQFKAVETKLA
HCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
GTVQQKAISNPRNFYQAGVLYRSMNEQDKKDLIANLAGDLNKVMDKDVKATMVSYFYRAD
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KEYGTRLAKATDTNLSQVKNKAMM
HHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MQMSKSFLLITVGLASTSLQAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQR
CCCCCCEEEEEEECCCCCCCHHEEECCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHH
FARERIPERVVHARGTGAHGEFVASGDFSDLTVSAPFTNKGKVTPVFVRFSTVIHSKGSP
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEEEEEEEHHCCCCCC
ETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFF
CHHCCCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHH
DFFSHEPSATNMLTWVYSNLGTPASYRTMDGFGVHAYKWINKQGDVNYVKFQWKSQQGIE
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHCHH
SLRPDEVTAMQGKDFNHLTNDLYEEIGRGNYPKWDLYVKVLSLEALSKLDYNGLDATKVW
HCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEE
LNVPDKKVGTMTLNRLPESFFLDTEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYR
EECCCCCCCHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECHHHHH
LGANLFQLPVNRPLAPVNNHNQNGVSNNAQAANGDVNYEPSRQLELAEDTQFKAVETKLA
HCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
GTVQQKAISNPRNFYQAGVLYRSMNEQDKKDLIANLAGDLNKVMDKDVKATMVSYFYRAD
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KEYGTRLAKATDTNLSQVKNKAMM
HHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]