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The map label for this gene is tnpA [H]

Identifier: 156977777

GI number: 156977777

Start: 1715262

End: 1716455

Strand: Direct

Name: tnpA [H]

Synonym: VIBHAR_06565

Alternate gene names: 156977777

Gene position: 1715262-1716455 (Clockwise)

Preceding gene: 156977776

Following gene: 156977779

Centisome position: 77.82

GC content: 44.22

Gene sequence:

>1194_bases
ATGTCGAATCATACTTTCCTATCTTCATTCTGGGAAGGCTTTCATATAGTAAAGTCTCATCAGACTGCTTCACTAATAAA
GCTCACTCTCAAACCTAACTCTATCGCTAAGTGTCCGTGCGGACTTAAAGCTCAAGCCATACATGAGTATCAATGGCGTA
ACGTGAAGGAAGCGACACTGTTAGGAACTCCCGTTGAACTATCCATTCAAACCCGACGCATTAAGTGCAGCCACTGCGGC
ATTAAAACAGAACGGCTATCTTGGTTGGAACCTTATGCTCGTATCACTAACCGCCTACGAAGCTATATAGAGCAGTTGTT
ACCTCTGCTACCCATTAAACATATAGCCCAAGTGACAGGCGTTCATTGGCACACAATCAAAGAGATAGATAAGCGTCGGC
TTCAGCAGGTAGTGCCGCAAGTTAAATGGGGTGAATTAAGGCAACTCGTCATGGACGAGTTTGCCATTTTTAAAGGACAC
CGCTATGCGACAGTCATTGCTGATGCGAAAAGTCATCAGGTTATCTGGATAGGACTGGGTCGTAGCCGCAAGGATATTCG
ACCGTTCTTTGAACAACTAGGTGAGCATGGCAAAAATATCGAAGCAGTAGCAATGGATATGAATACGGCTTTTGACCTTG
AAGTCCAAGCGCATTGCCCAAATGCCCGTATCGTTTATGACTTGTTCCACGTTGTAGCTAAGTTCGGTCGAGAAGTGATG
GATAGAGTCAGAGTCGACCAAGCCAATAAGCTAAAACAGGATAAAAAAGCAAGACAATGGGTCAAGCGTTCGCGCTGGGT
GTTATTGAAAAATAAGGATAATTTAAATACACAACAGGAAAGCTACCTCACAGAAATATTGAATATGAATCAGGACTTGA
TGACAACCTACTTACTGGGTGCGCAATTAAAGGAACTGTGGCGTTGTGGCTCTGAACTTCAGGCTAGAAACTTATGGCAG
GTATGGTGGGAGCAAGTGAATGAGAGTGGAATTAAGCCACTCAAAGAGTTCGCTCGAAAGCTCCGTCCATATCTTCATGG
GATCACTGCTTCAGCAAGCTACCCGCTGAATACCTGTACGCTTGAAGGGATAAATAACAAGATAAAGTTAATCAAGCGGA
TGGGGTATGGCTATCGAGATACTGATTACTTCTTCTTAAAGATAAAAGCGGCTTTCCCCGGAAAGCCGCGATGA

Upstream 100 bases:

>100_bases
TTTTGTTGGTTCATCGCGGATAAGCGGGAACTAAAAACAAAAAAGGTAGTAAGTGATAGAGTTTTATCGCCAAACAAAAC
CTACACAAACTACCGTTTTC

Downstream 100 bases:

>100_bases
ACCTTTTTGTTTGCTTTGTTGTCTCTTTACTATTGGTGTTATTGCTATCGCTACAGCCATATAAGCAGTGCGAAAATTAA
CAGACTCAACACGATACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSNHTFLSSFWEGFHIVKSHQTASLIKLTLKPNSIAKCPCGLKAQAIHEYQWRNVKEATLLGTPVELSIQTRRIKCSHCG
IKTERLSWLEPYARITNRLRSYIEQLLPLLPIKHIAQVTGVHWHTIKEIDKRRLQQVVPQVKWGELRQLVMDEFAIFKGH
RYATVIADAKSHQVIWIGLGRSRKDIRPFFEQLGEHGKNIEAVAMDMNTAFDLEVQAHCPNARIVYDLFHVVAKFGREVM
DRVRVDQANKLKQDKKARQWVKRSRWVLLKNKDNLNTQQESYLTEILNMNQDLMTTYLLGAQLKELWRCGSELQARNLWQ
VWWEQVNESGIKPLKEFARKLRPYLHGITASASYPLNTCTLEGINNKIKLIKRMGYGYRDTDYFFLKIKAAFPGKPR

Sequences:

>Translated_397_residues
MSNHTFLSSFWEGFHIVKSHQTASLIKLTLKPNSIAKCPCGLKAQAIHEYQWRNVKEATLLGTPVELSIQTRRIKCSHCG
IKTERLSWLEPYARITNRLRSYIEQLLPLLPIKHIAQVTGVHWHTIKEIDKRRLQQVVPQVKWGELRQLVMDEFAIFKGH
RYATVIADAKSHQVIWIGLGRSRKDIRPFFEQLGEHGKNIEAVAMDMNTAFDLEVQAHCPNARIVYDLFHVVAKFGREVM
DRVRVDQANKLKQDKKARQWVKRSRWVLLKNKDNLNTQQESYLTEILNMNQDLMTTYLLGAQLKELWRCGSELQARNLWQ
VWWEQVNESGIKPLKEFARKLRPYLHGITASASYPLNTCTLEGINNKIKLIKRMGYGYRDTDYFFLKIKAAFPGKPR
>Mature_396_residues
SNHTFLSSFWEGFHIVKSHQTASLIKLTLKPNSIAKCPCGLKAQAIHEYQWRNVKEATLLGTPVELSIQTRRIKCSHCGI
KTERLSWLEPYARITNRLRSYIEQLLPLLPIKHIAQVTGVHWHTIKEIDKRRLQQVVPQVKWGELRQLVMDEFAIFKGHR
YATVIADAKSHQVIWIGLGRSRKDIRPFFEQLGEHGKNIEAVAMDMNTAFDLEVQAHCPNARIVYDLFHVVAKFGREVMD
RVRVDQANKLKQDKKARQWVKRSRWVLLKNKDNLNTQQESYLTEILNMNQDLMTTYLLGAQLKELWRCGSELQARNLWQV
WWEQVNESGIKPLKEFARKLRPYLHGITASASYPLNTCTLEGINNKIKLIKRMGYGYRDTDYFFLKIKAAFPGKPR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46302; Mature: 46171

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHTFLSSFWEGFHIVKSHQTASLIKLTLKPNSIAKCPCGLKAQAIHEYQWRNVKEATL
CCCCHHHHHHHCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHE
LGTPVELSIQTRRIKCSHCGIKTERLSWLEPYARITNRLRSYIEQLLPLLPIKHIAQVTG
ECCCEEEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
VHWHTIKEIDKRRLQQVVPQVKWGELRQLVMDEFAIFKGHRYATVIADAKSHQVIWIGLG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECC
RSRKDIRPFFEQLGEHGKNIEAVAMDMNTAFDLEVQAHCPNARIVYDLFHVVAKFGREVM
CCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DRVRVDQANKLKQDKKARQWVKRSRWVLLKNKDNLNTQQESYLTEILNMNQDLMTTYLLG
HHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AQLKELWRCGSELQARNLWQVWWEQVNESGIKPLKEFARKLRPYLHGITASASYPLNTCT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LEGINNKIKLIKRMGYGYRDTDYFFLKIKAAFPGKPR
ECCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
SNHTFLSSFWEGFHIVKSHQTASLIKLTLKPNSIAKCPCGLKAQAIHEYQWRNVKEATL
CCCHHHHHHHCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHE
LGTPVELSIQTRRIKCSHCGIKTERLSWLEPYARITNRLRSYIEQLLPLLPIKHIAQVTG
ECCCEEEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
VHWHTIKEIDKRRLQQVVPQVKWGELRQLVMDEFAIFKGHRYATVIADAKSHQVIWIGLG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECC
RSRKDIRPFFEQLGEHGKNIEAVAMDMNTAFDLEVQAHCPNARIVYDLFHVVAKFGREVM
CCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DRVRVDQANKLKQDKKARQWVKRSRWVLLKNKDNLNTQQESYLTEILNMNQDLMTTYLLG
HHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AQLKELWRCGSELQARNLWQVWWEQVNESGIKPLKEFARKLRPYLHGITASASYPLNTCT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LEGINNKIKLIKRMGYGYRDTDYFFLKIKAAFPGKPR
ECCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]