| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977765
Identifier: 156977765
GI number: 156977765
Start: 1705115
End: 1705630
Strand: Reverse
Name: 156977765
Synonym: VIBHAR_06553
Alternate gene names: NA
Gene position: 1705630-1705115 (Counterclockwise)
Preceding gene: 156977767
Following gene: 156977760
Centisome position: 77.39
GC content: 44.77
Gene sequence:
>516_bases ATGGATATCCTTTCTTTTTATTGGAAATGTATGGCAAGCAGTATGGACGCAAAATCACAAGCCTATCTTGAGCAATATCT TCAAACATTATCCCAGCAAGAAAAAGACGCAATCCCATCGGTGAGTGCGAATTACTACTGTGCTGATGAACATAATGCGA ATGCTTGCGCTGAATTGGTAAGAATTGGTCAGAAAACCGCCTCTTGCAGCATGGAGCTTTGGTATAGCGAACAGGGAGAA ATGATGCCTCAAGTTGGAAACCTACAAGTTGTGACCAACTGGGATGGTGAACCTGTATGCGTCATTCGAATCACTGATGT TAGAACTTGTCGATATGCAGACGTGAGTGAGGAATTTGCTCACGCAGAAGGGGAAGGTGACCGCACAATGGCTTGGTGGC GAAAAGCGCACACCAGATTTTTCAAAGCGGAATGCGAAGAGCTGGGTATCGAATGGCATGAGCAGCGATTATTGCTTCTA GAGCGGTTTGAAGTGGTTTATCCGCAATTGAAATGA
Upstream 100 bases:
>100_bases AACCATAGCAAATAGAGGCTGGTTTTAGCAAAGAACTGATAAAAAATGCTTGTTTTATAAAGTTTTCTAATGAGCTTGAT GCTTGTCCTTTTTATGGTGA
Downstream 100 bases:
>100_bases ACCTGATAGAAAAAGGCTTGGTGAAATACGAAGCCTTTCACTAATAAGATTATTTACGCCAATTGTTCTTGGCTATAGAG CTGTTGGATCAGCGTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDILSFYWKCMASSMDAKSQAYLEQYLQTLSQQEKDAIPSVSANYYCADEHNANACAELVRIGQKTASCSMELWYSEQGE MMPQVGNLQVVTNWDGEPVCVIRITDVRTCRYADVSEEFAHAEGEGDRTMAWWRKAHTRFFKAECEELGIEWHEQRLLLL ERFEVVYPQLK
Sequences:
>Translated_171_residues MDILSFYWKCMASSMDAKSQAYLEQYLQTLSQQEKDAIPSVSANYYCADEHNANACAELVRIGQKTASCSMELWYSEQGE MMPQVGNLQVVTNWDGEPVCVIRITDVRTCRYADVSEEFAHAEGEGDRTMAWWRKAHTRFFKAECEELGIEWHEQRLLLL ERFEVVYPQLK >Mature_171_residues MDILSFYWKCMASSMDAKSQAYLEQYLQTLSQQEKDAIPSVSANYYCADEHNANACAELVRIGQKTASCSMELWYSEQGE MMPQVGNLQVVTNWDGEPVCVIRITDVRTCRYADVSEEFAHAEGEGDRTMAWWRKAHTRFFKAECEELGIEWHEQRLLLL ERFEVVYPQLK
Specific function: Unknown
COG id: COG4405
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19854; Mature: 19854
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILSFYWKCMASSMDAKSQAYLEQYLQTLSQQEKDAIPSVSANYYCADEHNANACAELV CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHH RIGQKTASCSMELWYSEQGEMMPQVGNLQVVTNWDGEPVCVIRITDVRTCRYADVSEEFA HHCCHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEECCCCHHHHHH HAEGEGDRTMAWWRKAHTRFFKAECEELGIEWHEQRLLLLERFEVVYPQLK HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDILSFYWKCMASSMDAKSQAYLEQYLQTLSQQEKDAIPSVSANYYCADEHNANACAELV CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHH RIGQKTASCSMELWYSEQGEMMPQVGNLQVVTNWDGEPVCVIRITDVRTCRYADVSEEFA HHCCHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEECCCCHHHHHH HAEGEGDRTMAWWRKAHTRFFKAECEELGIEWHEQRLLLLERFEVVYPQLK HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA