| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977756
Identifier: 156977756
GI number: 156977756
Start: 1698133
End: 1698399
Strand: Reverse
Name: 156977756
Synonym: VIBHAR_06544
Alternate gene names: NA
Gene position: 1698399-1698133 (Counterclockwise)
Preceding gene: 156977757
Following gene: 156977755
Centisome position: 77.06
GC content: 41.57
Gene sequence:
>267_bases ATGCAAAGCGTATTTCTATCTACTCTAGGTCTTATTGCTGTAATGTCATCACCAATCGCTGCTGCTAACACTCTAGACAA AGAAGAGTGGAGTGCGGATTTACGTCAAGAATTTACAACAATGAAGCATGAGGCGGTTGCGGACATCCAACAAATGAACA TGGACGCTATTGATGAACGCGATGAACGCATTGTTAAACACATCAAAGAACAACAAGCTCAACTGGTAAAGATCAAATGC CAGAAGACAGAGGCAACCAAGTCATAA
Upstream 100 bases:
>100_bases TTTGTTTAAGTTGTTGATATTAAAGGTTTAAAAAGTTGGCATCCTATGTGCAAAGTATAGAACGCAACCCAATGAACTGC TAATCCCTAAGGAGCTTATT
Downstream 100 bases:
>100_bases CCTCTGACGACAAAGATTCCGTGTTAGTCACAAGGACGAGTGACTAACCAGAGTGCATCCGATACAAGCATGACGTTAGT GAGCAGTCAGCGTCAACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MQSVFLSTLGLIAVMSSPIAAANTLDKEEWSADLRQEFTTMKHEAVADIQQMNMDAIDERDERIVKHIKEQQAQLVKIKC QKTEATKS
Sequences:
>Translated_88_residues MQSVFLSTLGLIAVMSSPIAAANTLDKEEWSADLRQEFTTMKHEAVADIQQMNMDAIDERDERIVKHIKEQQAQLVKIKC QKTEATKS >Mature_88_residues MQSVFLSTLGLIAVMSSPIAAANTLDKEEWSADLRQEFTTMKHEAVADIQQMNMDAIDERDERIVKHIKEQQAQLVKIKC QKTEATKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9964; Mature: 9964
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVFLSTLGLIAVMSSPIAAANTLDKEEWSADLRQEFTTMKHEAVADIQQMNMDAIDER CCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHH DERIVKHIKEQQAQLVKIKCQKTEATKS HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQSVFLSTLGLIAVMSSPIAAANTLDKEEWSADLRQEFTTMKHEAVADIQQMNMDAIDER CCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHH DERIVKHIKEQQAQLVKIKCQKTEATKS HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA