Click here to switch to the map view.

The map label for this gene is 156977751

Identifier: 156977751

GI number: 156977751

Start: 1692377

End: 1693033

Strand: Direct

Name: 156977751

Synonym: VIBHAR_06539

Alternate gene names: NA

Gene position: 1692377-1693033 (Clockwise)

Preceding gene: 156977750

Following gene: 156977752

Centisome position: 76.79

GC content: 46.12

Gene sequence:

>657_bases
GTGACGGAAGCTCATCGAAGGGCGGGAAGGCCTACAGATAAAATCGACGCACGGGAGAAACTGATTTTCCATGCGCGCGA
ACTCTTCACTATTATGGCTTACGACAAAGTGTCTACTCGCCTGGTCGCGCAGAAAGCAGGCGTGAACGTGGCGATGATTC
GCTACTACTTTGGCAACAAAGAGGGCTTGTTCGAGACCATGTTGCGCGAAACCCTCTCACCGATGCAAAAACAGATGCAG
GCATTGATGTCCGACAGTAACGAGCAAAACTTCCTCGATTTAATGCGTACCTACTATCGCGAGATGATCAAAGTGCCACA
GTTCCCACGTTTGATTGCTCAAGTCATGCATATGCCTCCTTCAGAAACTCAACGTAAATTACTGGAAAAAGTTTTCGCTG
ACATCAGCAAACCAATGCAAGGCGTGATCTTTGATAAGTTGATCGACAGTGGCGTTTTACGAAAAGACGCTGACCCTCAA
CTTTGTCGCGTCTCTTACATCAGCTTAATGGTGTTTCCTTTTATGGCACCACCAGCACTTCTGGCTATTCACGGTATCGA
GCTCTCAGAAGCCTTCTTGAACCGATTATTCGAACACAACATACAACTGATGAAACATGGATTTTTAGATTCGGGCGACC
AATATGAAAATGAATAA

Upstream 100 bases:

>100_bases
AAATTAATCACTTGATTAAATACTGATTAATTTTTTGCATATCGTATTAGAAATCAGCGTCTTATAATTAATCAAATGTT
TAATATTTTGAGAGACGATT

Downstream 100 bases:

>100_bases
AAAGCTGCTGTTCTTTCCTGCCCTTGCTGTTGGGGTCGTCATTCTATTTTTGGCGATTAGCCTTAAGCCAGATTTGCCAG
TAAAGCCTGCGGGTGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Of TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTEAHRRAGRPTDKIDAREKLIFHARELFTIMAYDKVSTRLVAQKAGVNVAMIRYYFGNKEGLFETMLRETLSPMQKQMQ
ALMSDSNEQNFLDLMRTYYREMIKVPQFPRLIAQVMHMPPSETQRKLLEKVFADISKPMQGVIFDKLIDSGVLRKDADPQ
LCRVSYISLMVFPFMAPPALLAIHGIELSEAFLNRLFEHNIQLMKHGFLDSGDQYENE

Sequences:

>Translated_218_residues
MTEAHRRAGRPTDKIDAREKLIFHARELFTIMAYDKVSTRLVAQKAGVNVAMIRYYFGNKEGLFETMLRETLSPMQKQMQ
ALMSDSNEQNFLDLMRTYYREMIKVPQFPRLIAQVMHMPPSETQRKLLEKVFADISKPMQGVIFDKLIDSGVLRKDADPQ
LCRVSYISLMVFPFMAPPALLAIHGIELSEAFLNRLFEHNIQLMKHGFLDSGDQYENE
>Mature_217_residues
TEAHRRAGRPTDKIDAREKLIFHARELFTIMAYDKVSTRLVAQKAGVNVAMIRYYFGNKEGLFETMLRETLSPMQKQMQA
LMSDSNEQNFLDLMRTYYREMIKVPQFPRLIAQVMHMPPSETQRKLLEKVFADISKPMQGVIFDKLIDSGVLRKDADPQL
CRVSYISLMVFPFMAPPALLAIHGIELSEAFLNRLFEHNIQLMKHGFLDSGDQYENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25281; Mature: 25150

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAHRRAGRPTDKIDAREKLIFHARELFTIMAYDKVSTRLVAQKAGVNVAMIRYYFGNK
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCC
EGLFETMLRETLSPMQKQMQALMSDSNEQNFLDLMRTYYREMIKVPQFPRLIAQVMHMPP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
SETQRKLLEKVFADISKPMQGVIFDKLIDSGVLRKDADPQLCRVSYISLMVFPFMAPPAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
LAIHGIELSEAFLNRLFEHNIQLMKHGFLDSGDQYENE
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TEAHRRAGRPTDKIDAREKLIFHARELFTIMAYDKVSTRLVAQKAGVNVAMIRYYFGNK
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCC
EGLFETMLRETLSPMQKQMQALMSDSNEQNFLDLMRTYYREMIKVPQFPRLIAQVMHMPP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
SETQRKLLEKVFADISKPMQGVIFDKLIDSGVLRKDADPQLCRVSYISLMVFPFMAPPAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
LAIHGIELSEAFLNRLFEHNIQLMKHGFLDSGDQYENE
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA