Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977750

Identifier: 156977750

GI number: 156977750

Start: 1691538

End: 1692197

Strand: Direct

Name: 156977750

Synonym: VIBHAR_06538

Alternate gene names: NA

Gene position: 1691538-1692197 (Clockwise)

Preceding gene: 156977748

Following gene: 156977751

Centisome position: 76.75

GC content: 45.3

Gene sequence:

>660_bases
ATGTCCAAGCCCTTGTATGTTTTTGATCTGGATGAAACCTTAATCAACGCTGACTGCGCAATGATTTGGAATGAATTTAT
GGTCGAGAAAGGCATCGCCACTGCGCCTAACTTTATTGAGGAAGATAAGCGTCTAATGGGCTTGTACGCAGAAGGCAAAA
TGAACATGGAAGATTACCTAACGTTCTCCATGAAACCGCTAGAAAACATGCCTATTGAACAGGTCAACGCCTTGGTCGAG
GGGTGCGTTGAAAACCATATTCTGGTTAAACTCTTCCCGCAAGCCAAAACCCTGATTGAACAGCTGCTTCGTGATGAGAT
TGATATGGTCATCATCTCTGCCAGCGTCACTTTTTTGGTTGAAGCGGTTGGTCGACGCATCGGTATTCCTAACGCGCTCG
GGATCGACTTAGTGGTGACTGATAACCGATATAGCGCAGAAATCGACGGAATCCCTAGTTACCGAGAAGGCAAAGTAACG
CGCTTAAAACAGTGGTTAGAAACTCAGCCTGACAACTACTCAGAAATCCATTTCTACACGGATTCGATTAACGACTTACC
ACTGTGTGAATACGCGAATTACGCTTATCTGGTCAATCCATGTCCTCGCCTAAAAGAGCACACCGATAGACCAAATTGGA
CTGTGTTAAGTTGGGGGTAA

Upstream 100 bases:

>100_bases
GTCACAGTTTATCGTTAGCATACGTCCCTTAATCGTGAGCCTCGCTCTATACTGAGCGATACGTTCCGTTGACCTCAATT
CAAACTGTGAGAAACCAACT

Downstream 100 bases:

>100_bases
AACGGCTCAACAACATTTGCCTTCTTCACGAGATATAAAAGAGCAGGACTTACTGCTCTTTTTTGTGCCTCTCCTTCACA
AATTAATCACTTGATTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSKPLYVFDLDETLINADCAMIWNEFMVEKGIATAPNFIEEDKRLMGLYAEGKMNMEDYLTFSMKPLENMPIEQVNALVE
GCVENHILVKLFPQAKTLIEQLLRDEIDMVIISASVTFLVEAVGRRIGIPNALGIDLVVTDNRYSAEIDGIPSYREGKVT
RLKQWLETQPDNYSEIHFYTDSINDLPLCEYANYAYLVNPCPRLKEHTDRPNWTVLSWG

Sequences:

>Translated_219_residues
MSKPLYVFDLDETLINADCAMIWNEFMVEKGIATAPNFIEEDKRLMGLYAEGKMNMEDYLTFSMKPLENMPIEQVNALVE
GCVENHILVKLFPQAKTLIEQLLRDEIDMVIISASVTFLVEAVGRRIGIPNALGIDLVVTDNRYSAEIDGIPSYREGKVT
RLKQWLETQPDNYSEIHFYTDSINDLPLCEYANYAYLVNPCPRLKEHTDRPNWTVLSWG
>Mature_218_residues
SKPLYVFDLDETLINADCAMIWNEFMVEKGIATAPNFIEEDKRLMGLYAEGKMNMEDYLTFSMKPLENMPIEQVNALVEG
CVENHILVKLFPQAKTLIEQLLRDEIDMVIISASVTFLVEAVGRRIGIPNALGIDLVVTDNRYSAEIDGIPSYREGKVTR
LKQWLETQPDNYSEIHFYTDSINDLPLCEYANYAYLVNPCPRLKEHTDRPNWTVLSWG

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25118; Mature: 24987

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLYVFDLDETLINADCAMIWNEFMVEKGIATAPNFIEEDKRLMGLYAEGKMNMEDYL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCHHHHE
TFSMKPLENMPIEQVNALVEGCVENHILVKLFPQAKTLIEQLLRDEIDMVIISASVTFLV
EEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEHHHHHHHH
EAVGRRIGIPNALGIDLVVTDNRYSAEIDGIPSYREGKVTRLKQWLETQPDNYSEIHFYT
HHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEE
DSINDLPLCEYANYAYLVNPCPRLKEHTDRPNWTVLSWG
CCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEECC
>Mature Secondary Structure 
SKPLYVFDLDETLINADCAMIWNEFMVEKGIATAPNFIEEDKRLMGLYAEGKMNMEDYL
CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCHHHHE
TFSMKPLENMPIEQVNALVEGCVENHILVKLFPQAKTLIEQLLRDEIDMVIISASVTFLV
EEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEHHHHHHHH
EAVGRRIGIPNALGIDLVVTDNRYSAEIDGIPSYREGKVTRLKQWLETQPDNYSEIHFYT
HHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEE
DSINDLPLCEYANYAYLVNPCPRLKEHTDRPNWTVLSWG
CCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]