Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977737

Identifier: 156977737

GI number: 156977737

Start: 1680329

End: 1680736

Strand: Direct

Name: 156977737

Synonym: VIBHAR_06525

Alternate gene names: NA

Gene position: 1680329-1680736 (Clockwise)

Preceding gene: 156977733

Following gene: 156977739

Centisome position: 76.24

GC content: 44.12

Gene sequence:

>408_bases
ATGATCATGTTTGGCTTCTTGCTAAATGTCGTATATGGCATTGAGCAAAAACACTACGGGGTTATTCTGATTGGCGCTTT
ATTCGGTATAGCGACATCACTAAGACAGATCTCTCTTCACGTTATCCCGGGAACGCCAGGGTTTGGAAGCGCTATCTTAG
GCATGCACTACTACACATGGGCATTCGTTATCTTCTGTATGGCTGTTGCTGGTATTGCTCTGCTTCTCATTCTCTGGGAT
GACAGGTATTCAAACCAAAACCACGAAATGAGCCCGCTTGCCAAAAGTGTTTGCATACTAGCAATCGCAACAGTTCTAAT
AAACGTCATTTCAACGTTTATCGAGTGCGGCCCATTTGAGTGTCCGGCAGATCCTGTGAGCTATTGGCTTCTTGATCTAT
TCAAATAA

Upstream 100 bases:

>100_bases
TTGGGTATGACGCTTGTTCTACTCACGAGGTCAATTTTTCCAATTTAGCCTGGGGGAACTACCCTACCCGCTTTGTTTGT
TGCAAAGATTGGGGTTTGTG

Downstream 100 bases:

>100_bases
TTAAAAAGCTCAGCACCACTTGAAGAACACCACCCTCACTAGCCCCGGAGTTATCTGCTTTGGGGCTTTTTAATACAAAT
ACCCAAGATGGGATTGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTWAFVIFCMAVAGIALLLILWD
DRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFECPADPVSYWLLDLFK

Sequences:

>Translated_135_residues
MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTWAFVIFCMAVAGIALLLILWD
DRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFECPADPVSYWLLDLFK
>Mature_135_residues
MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTWAFVIFCMAVAGIALLLILWD
DRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFECPADPVSYWLLDLFK

Specific function: Unknown

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14932; Mature: 14932

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTW
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH
AFVIFCMAVAGIALLLILWDDRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CPADPVSYWLLDLFK
CCCCHHHHHHHHHCC
>Mature Secondary Structure
MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTW
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH
AFVIFCMAVAGIALLLILWDDRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CPADPVSYWLLDLFK
CCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA