| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977651
Identifier: 156977651
GI number: 156977651
Start: 1594921
End: 1595289
Strand: Direct
Name: 156977651
Synonym: VIBHAR_06439
Alternate gene names: NA
Gene position: 1594921-1595289 (Clockwise)
Preceding gene: 156977650
Following gene: 156977652
Centisome position: 72.36
GC content: 45.8
Gene sequence:
>369_bases GTGCCTGGTATTGGTCGCATTCTCGCCCTCACTATCTTGTATGAAATCGGCAATATTGAACGCTTCCCGTCGGTGCAAAA CTTTGCCTCTTACTCACGGTTAGTCAAATGCAAAGCTGAATCAGCGGGCAAACAAAAAGGAACCAACGGAAACAAGATTG GGAACGCCTACTTAAAATGGGCGTTCTCGGAAGCGGCGGTTCTTTATTTAAGAGGCAATGAACCCGCCAAGAAATACATT CAACGCTTGCAAAAACGCATGAGCAAAGCCAAAGCGCTATCAGCGTTGGCTCATAAACTAGGGCGATGTGTCTACTTCAT GCTGAGGGACAAAACGGTGTTTGATGAAAAACGGTTTTTACCGCAATAA
Upstream 100 bases:
>100_bases ATGTCATCGCCTTTACACCAAGGAATTAGCAAGCGTAGAACACTTTATTGAAAAAACAGCCAAGCAGCACAGCGCTCAAG ATTACAACCTTATCTAGACT
Downstream 100 bases:
>100_bases GTCGCACAATGAAGTGAGCTGAAAATCTAACTGGTGCTGAGTGAGAACACGTCACTGACTCAAATTTACTGGGATTTAAG CCCGAAAAAGTCGGTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: ISGsu4 Transposase; Arginyl-TRNA Synthetase Class Ic; ISGsu5 Transposase; Transposase Or Inactivated Derivative
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MPGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGNEPAKKYI QRLQKRMSKAKALSALAHKLGRCVYFMLRDKTVFDEKRFLPQ
Sequences:
>Translated_122_residues MPGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGNEPAKKYI QRLQKRMSKAKALSALAHKLGRCVYFMLRDKTVFDEKRFLPQ >Mature_121_residues PGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKWAFSEAAVLYLRGNEPAKKYIQ RLQKRMSKAKALSALAHKLGRCVYFMLRDKTVFDEKRFLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13831; Mature: 13700
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKW CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AFSEAAVLYLRGNEPAKKYIQRLQKRMSKAKALSALAHKLGRCVYFMLRDKTVFDEKRFL EECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC PQ CC >Mature Secondary Structure PGIGRILALTILYEIGNIERFPSVQNFASYSRLVKCKAESAGKQKGTNGNKIGNAYLKW CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AFSEAAVLYLRGNEPAKKYIQRLQKRMSKAKALSALAHKLGRCVYFMLRDKTVFDEKRFL EECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC PQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA