| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is add2 [H]
Identifier: 156977633
GI number: 156977633
Start: 1582723
End: 1583730
Strand: Direct
Name: add2 [H]
Synonym: VIBHAR_06421
Alternate gene names: 156977633
Gene position: 1582723-1583730 (Clockwise)
Preceding gene: 156977632
Following gene: 156977634
Centisome position: 71.81
GC content: 47.52
Gene sequence:
>1008_bases ATGAACGCATTTATTCAAGGTCTTCCAAAGGTAGAGTTACACTTACATATCGAAGGTTCGCTAGAGCCAGAACTGTTGTT CGAACTGGCACAACGCAACAACATCGACATTCCTTACGAGTCACCACAGGAACTACGCAAAGCCTACGAGTTCGAAGATT TACAGTCTTTCCTAGATATCTATTATCAAGGCGCCAACGCGCTGCGTACGGAACAAGATTTCTATGATTTGACGTGGGCA TACCTAGAGCGCTGCAAAGCCGACAACGTTATCCATACTGAGATCTTCTTTGACCCACAGACCCATACCGATCGCGGCAT TGAGTTTGAGACGGTCATCAACGGCATTCACCGTGCTATGCAAGATGGTACCGAACAGCTAGGTATTACGTTTCAAATCA TTGCGTGCTTCTTGCGTCACCTATCGGAAGAGCGCGCGATTGAAACGCTGCAATCAATCATCAAGCATCAAGACAAAATC ATCGGTGTCGGTTTGGATTCTTCAGAGCTTGGTCACCCACCAGAGAAGTTCAAACGTGCTTTCCAACAAGCCAAAGACGC TGGCTTACTGACCGTTGCACACGCTGGTGAAGAAGGCCCTGCGCAAAACATTGTCGACTCTGTCGAGATGCTCAGTGTCA GCCGTGTTGACCATGGTGTTCGCTGCGTTGAGGATGAGTCATTAATGGATGCCCTGATCGAAAGCAAAATGCCACTGACG GTTTGCCCATTATCGAACATTAAGCTGTGTGTATTTGATGAAATGGAGCAGCACAACATTGTCGATTTGTTGCGTAAAGG CGTCGCGGTGACGATTAACTCGGACGACCCTGCTTATTTTGGGGGTTACATGACGGATAACTTCATGGCGGTCAGTAATG CTCACCCAATGACGAAGTCAGAACTCGCTCAGTTCACGATCAATGCGATTAACGCGAGCTTCATTAGCGAGGCACTTAAA GCCAAATACCGTGCACAAGTCGCTGATTACTTAGCAATCACTGACTGA
Upstream 100 bases:
>100_bases GGATCTTACTCTTTGTAATAGCGTTCGATTTTTCTCAATCTATACCTATCCTTAAAGTAATTGCATCCACAACAACCATA AGAAAAAGTGGGAGTTTATT
Downstream 100 bases:
>100_bases TAAGTAAACTAGTGGTTCTCTAGTCTTTTTGCTATCTATCTGCAACGGTGGATACATGAAGTTGCAGTTAACCGAGCTCA ACATTAAGAACGCTTTAATA
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase 2 [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNAFIQGLPKVELHLHIEGSLEPELLFELAQRNNIDIPYESPQELRKAYEFEDLQSFLDIYYQGANALRTEQDFYDLTWA YLERCKADNVIHTEIFFDPQTHTDRGIEFETVINGIHRAMQDGTEQLGITFQIIACFLRHLSEERAIETLQSIIKHQDKI IGVGLDSSELGHPPEKFKRAFQQAKDAGLLTVAHAGEEGPAQNIVDSVEMLSVSRVDHGVRCVEDESLMDALIESKMPLT VCPLSNIKLCVFDEMEQHNIVDLLRKGVAVTINSDDPAYFGGYMTDNFMAVSNAHPMTKSELAQFTINAINASFISEALK AKYRAQVADYLAITD
Sequences:
>Translated_335_residues MNAFIQGLPKVELHLHIEGSLEPELLFELAQRNNIDIPYESPQELRKAYEFEDLQSFLDIYYQGANALRTEQDFYDLTWA YLERCKADNVIHTEIFFDPQTHTDRGIEFETVINGIHRAMQDGTEQLGITFQIIACFLRHLSEERAIETLQSIIKHQDKI IGVGLDSSELGHPPEKFKRAFQQAKDAGLLTVAHAGEEGPAQNIVDSVEMLSVSRVDHGVRCVEDESLMDALIESKMPLT VCPLSNIKLCVFDEMEQHNIVDLLRKGVAVTINSDDPAYFGGYMTDNFMAVSNAHPMTKSELAQFTINAINASFISEALK AKYRAQVADYLAITD >Mature_335_residues MNAFIQGLPKVELHLHIEGSLEPELLFELAQRNNIDIPYESPQELRKAYEFEDLQSFLDIYYQGANALRTEQDFYDLTWA YLERCKADNVIHTEIFFDPQTHTDRGIEFETVINGIHRAMQDGTEQLGITFQIIACFLRHLSEERAIETLQSIIKHQDKI IGVGLDSSELGHPPEKFKRAFQQAKDAGLLTVAHAGEEGPAQNIVDSVEMLSVSRVDHGVRCVEDESLMDALIESKMPLT VCPLSNIKLCVFDEMEQHNIVDLLRKGVAVTINSDDPAYFGGYMTDNFMAVSNAHPMTKSELAQFTINAINASFISEALK AKYRAQVADYLAITD
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=337, Percent_Identity=22.8486646884273, Blast_Score=116, Evalue=3e-26, Organism=Escherichia coli, GI1787910, Length=326, Percent_Identity=26.3803680981595, Blast_Score=145, Evalue=3e-36, Organism=Caenorhabditis elegans, GI32565969, Length=339, Percent_Identity=24.7787610619469, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538512, Length=339, Percent_Identity=24.7787610619469, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324188, Length=334, Percent_Identity=43.1137724550898, Blast_Score=273, Evalue=2e-74, Organism=Drosophila melanogaster, GI24645260, Length=345, Percent_Identity=23.768115942029, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37772; Mature: 37772
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAFIQGLPKVELHLHIEGSLEPELLFELAQRNNIDIPYESPQELRKAYEFEDLQSFLDI CCCHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHH YYQGANALRTEQDFYDLTWAYLERCKADNVIHTEIFFDPQTHTDRGIEFETVINGIHRAM HHCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH QDGTEQLGITFQIIACFLRHLSEERAIETLQSIIKHQDKIIGVGLDSSELGHPPEKFKRA HCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCCHHHHHHH FQQAKDAGLLTVAHAGEEGPAQNIVDSVEMLSVSRVDHGVRCVEDESLMDALIESKMPLT HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCCEE VCPLSNIKLCVFDEMEQHNIVDLLRKGVAVTINSDDPAYFGGYMTDNFMAVSNAHPMTKS EECCCCCEEEEECCCHHCHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEECCCCCCCHH ELAQFTINAINASFISEALKAKYRAQVADYLAITD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNAFIQGLPKVELHLHIEGSLEPELLFELAQRNNIDIPYESPQELRKAYEFEDLQSFLDI CCCHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHH YYQGANALRTEQDFYDLTWAYLERCKADNVIHTEIFFDPQTHTDRGIEFETVINGIHRAM HHCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH QDGTEQLGITFQIIACFLRHLSEERAIETLQSIIKHQDKIIGVGLDSSELGHPPEKFKRA HCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCCHHHHHHH FQQAKDAGLLTVAHAGEEGPAQNIVDSVEMLSVSRVDHGVRCVEDESLMDALIESKMPLT HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCCEE VCPLSNIKLCVFDEMEQHNIVDLLRKGVAVTINSDDPAYFGGYMTDNFMAVSNAHPMTKS EECCCCCEEEEECCCHHCHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEECCCCCCCHH ELAQFTINAINASFISEALKAKYRAQVADYLAITD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]