| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977614
Identifier: 156977614
GI number: 156977614
Start: 1570192
End: 1571724
Strand: Reverse
Name: 156977614
Synonym: VIBHAR_06402
Alternate gene names: NA
Gene position: 1571724-1570192 (Counterclockwise)
Preceding gene: 156977615
Following gene: 156977613
Centisome position: 71.31
GC content: 48.21
Gene sequence:
>1533_bases ATGAAAAAAACGCCAGTTATCAACCCAGAAAGCCAAGATGTTGCCGAGCTACAAGCGATGGTGAAAGCGCTGATGGTGTC AGAAAGCCAATGGAAACAAGAGCGTCAATCTCTGCTTGAGCAACTCAAACTTGCTTTCGACCGTCAGTTCGCAAAACGCT CGGAGGCGCTAAAGCCTTACGATGAATCTCAAGGTGACCTCTTCAACGAAGTGGAATGTGAAGCCGCTAAGGAAGAAGAG GTTGAAGTGGTCACGACGACCACCACAACGAAGAAACGTGGTAAACGCAAGCCCCTTCCAAAGACCTTGCCTCGTGAGGT TATCGAACTCGATTTAGATGACAATGAAAAGCAATGTGCGTGCTGCCAACATAGTCTGCATAAAATCGGTGAAGACCGCA GTGAGAAACTTGAGTTCTCACCAGCTGTGCTCAAAGTGCTGGAATATGTTCGTCCTAAGTATGCTTGTCGTCAGTGCGAG CAAACTGAAGACAAAAGCCACATCGTTCAAAAACCAGCGCCCCAGAGCATCATCCCTAAAAGCTTCGCGACAGAAAGCTT GCTGGCCAATATCATCCTTGGTAAATATCAATACGCAATGCCCCTTTACCGCCAAGAGTCGCTGTTTACTCAGTCGGGTA TTGAGCTATCGCGAACTACCATGGCAAGGTGGGTTATCCAAGTCAGTGAGAAGTTCAAACCCCTCTATGCCGCCTTAAAA GCGCATCTACTTCAACAAGTGGTGGTTCAGGCGGATGAAACGCCGCTCAATGTCCTTAAAGAAGATAAAAAGTGTTATAT GTGGCTCTACTGCTCGGGCGCAGACTCGCCCGACGCTGCACTGCCGAATGTAAAGAATATCGCCTTGTACGACTATCAAA ACAGTCGCGCGAGGGTATGCCCTGTTGCCTTCTTGGGGGATTACAGTGGTTATCTGCAAACCGATGGCTATGGTGCCTAT GATGGTCTTCATCACGTAACCAATGTGGGTTGCTTGGCGCATGCACGGCGTAAGTTCATGGATGCTAAGAAGCTTCAAGG TAAAGGTAAGTCAGGCAAAGCAGATAAAGCGCTGGCCAAAATCCAGAAGCTCTATGGGATAGAATCGCGCTTAAAAGGTG CGACTGTCGAAACACGAAAAGCAGAACGTCAACAGCATGCCAAGCCGATACTGGATGAGCTGCACGACTGGATGACGTCT CAACAAGTAATAAGCTCTAGTCCATTAGGAAAAGCGATTAAGTATACGCTCGGCCAATGGCCCAAGCTCATCCGCTATAT CGATGACGGTCATTTATCTATCGATAATAATCGTGCTGAACGCGCCATTAAACCGCTGGTCATTGGCAGAAAAAATTGGC TGTTCTCAAACACACCAAATGGTGCTGATGCGAGCGCGATGCTTTACAGCATCGTCGAGACAGCGAAAGCCAACGGCCTT ATCCTCTACGACTACATGGTCAAGTGCATGAAAGAGCTCGCGAAAGCGGAGCCTGATATCGATGCGCTCCTACCTTGGAA CTTCAAACATTAA
Upstream 100 bases:
>100_bases GCCATAAACCCGTTAAAATAAACGATTTTACAATGACTTAATTGATAATAAAGCCTTATCTACCAAGCGTGAATGGCATG ATTTTAGTATAATAAATGCC
Downstream 100 bases:
>100_bases CAACACCGCCCCGTGGGTTCATGGGGCGCATACTTTACATCTTGTAAAGAGATATCCCAATTCGTAGAAAAGCACTGAGC ATTTTAGAAGAACTAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDNEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE QTEDKSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK AHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDGYGAY DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTS QQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL ILYDYMVKCMKELAKAEPDIDALLPWNFKH
Sequences:
>Translated_510_residues MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDNEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE QTEDKSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK AHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDGYGAY DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTS QQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL ILYDYMVKCMKELAKAEPDIDALLPWNFKH >Mature_510_residues MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDNEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE QTEDKSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK AHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDGYGAY DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTS QQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL ILYDYMVKCMKELAKAEPDIDALLPWNFKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 57748; Mature: 57748
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDNEKQCA CCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHEECCCCCCHHHH CCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDKSHIVQKPAPQSIIPK HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCCCCCCCCCH SFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVC HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEE PVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAK EEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH IQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTSQQVISSSPLGKAIKYTLGQW HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL HHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCE ILYDYMVKCMKELAKAEPDIDALLPWNFKH EEHHHHHHHHHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDNEKQCA CCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHEECCCCCCHHHH CCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDKSHIVQKPAPQSIIPK HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCCCCCCCCCH SFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVC HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEE PVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAK EEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH IQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTSQQVISSSPLGKAIKYTLGQW HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL HHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCE ILYDYMVKCMKELAKAEPDIDALLPWNFKH EEHHHHHHHHHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]