The gene/protein map for NC_009784 is currently unavailable.
Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977612

Identifier: 156977612

GI number: 156977612

Start: 1568861

End: 1569685

Strand: Direct

Name: 156977612

Synonym: VIBHAR_06400

Alternate gene names: NA

Gene position: 1568861-1569685 (Clockwise)

Preceding gene: 156977611

Following gene: 156977616

Centisome position: 71.18

GC content: 48.97

Gene sequence:

>825_bases
ATGCCTAACCCGTTATCAGAGCTCAACTTGGAGAGCCTGAAACAGATCGGATGGCTGCTGACCGACGTGGACGACACGTT
GACTTGGCAAGGTAAACTGCCACCAGAGACATTAGTTGCGCTAGCCGAGCTAGAGCGTGTGGGCGTAAAAGTGGTCGCAG
TCACAGGCGCCTGCGCTGGTTGGTGTGACCAAATGGCAAAGATGTGGTCACTGCATGGTGTAATTGGTGAAAATGGCGCG
TTTTGGATGAGAAAAGACGCGACAGGATTCAACACCACCTTTGCCCGTCCGGCAGAAGTGATGCGCAAAGAACAGTATGC
ATTGCAAGAAAGCATTGCGGGCATTTTGGCAGAGTATCCTGATGTCGACTTCAGCCACGATCAGAGCTTTCGCTACTGCG
ACGTGGCGGTGAACATCGCACAAGATAGAGCGCCGGTCCCTCCTTCTACGACAATGGAAATCCTCAATCGCATCGTGAAT
TTGAATGTGGAATCCCACCCCGTCAACGCAACATTGAGTTCAATTCACATCAATGCATGGGTGGGCAATCACATTAAGCG
CACTAGTGGTGAGGCCTACATTAGGCAGTTCAATAACGGCGAGTTACCGAGCTTAGGTCACATCACGTATGTGGGTGATT
CATTGAATGATGAAGGCATGTTTGAATGGTTGCCAACAACCTTTGGCGTGAACAATATTCGTCCCTTGTTGGCGAAATTG
AACCATCAACCAAGCTTTTTAACTGAGGAAAATGGCGGCTTTGGGTTTGCACAGTTAGCAAATCTTATCGTCAAAGCAAA
AAAGGACAACAACACTAGCGAGTAA

Upstream 100 bases:

>100_bases
AAACGCATCGAGTGTACACTGGCCCCAGCGGAATCATTGCAAGACGTCAGTGACGAAACCCAAGCAATAAATCCTCAAGT
AAACAATCAAGGAGTGGTGA

Downstream 100 bases:

>100_bases
ACCAAGCCGCTTGTTGTGATCTGCTATGAATAAGAGGGCGTTGATGGTTCTTTGGTAAACAAATTATGAATAAATTGACG
CTCTTCTTCACTTAAAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; HAD-Superfamily Hydrolase; Hydrolase Protein; IIB Family HAD Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Of Had Superfamily Protein; Archae-Like Hydrolase Family Protein

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MPNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAGWCDQMAKMWSLHGVIGENGA
FWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYPDVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVN
LNVESHPVNATLSSIHINAWVGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL
NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE

Sequences:

>Translated_274_residues
MPNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAGWCDQMAKMWSLHGVIGENGA
FWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYPDVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVN
LNVESHPVNATLSSIHINAWVGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL
NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE
>Mature_273_residues
PNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAGWCDQMAKMWSLHGVIGENGAF
WMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYPDVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVNL
NVESHPVNATLSSIHINAWVGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKLN
HQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30326; Mature: 30194

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAG
CCCCHHHCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHH
WCDQMAKMWSLHGVIGENGAFWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYP
HHHHHHHHHHHHCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVNLNVESHPVNATLSSIHINAW
CCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE
VGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL
CCCCHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHC
NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE
CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAG
CCCHHHCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHH
WCDQMAKMWSLHGVIGENGAFWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYP
HHHHHHHHHHHHCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVNLNVESHPVNATLSSIHINAW
CCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE
VGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL
CCCCHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHC
NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE
CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA