| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yheS [C]
Identifier: 156977599
GI number: 156977599
Start: 1557405
End: 1557596
Strand: Reverse
Name: yheS [C]
Synonym: VIBHAR_06387
Alternate gene names: 156977599
Gene position: 1557596-1557405 (Counterclockwise)
Preceding gene: 156977600
Following gene: 156977598
Centisome position: 70.67
GC content: 48.44
Gene sequence:
>192_bases ATGAAGCTCGCGAGTCATCAACCCACTCAGCCTTTATTGCTCTTGGATGAGCCGGATAATCATCTCGACCTAGATTCGAA AATCATGCTCGCTCAGGCATTAAATGCTTGCCGAGGCGGTTTTATTCTTATCAGTCATGACCAAGATTTTGCCGCGGAGT CGGGTGTGTCTCGCTGCGTTGAACTGAGCTAA
Upstream 100 bases:
>100_bases ATTGAAGCCTGCATCTTCAAGTTGAACGGGTATAGCAGGTATTGGCTTTCGTCGAGACAGTGTCTTTCGTTTTGGGAATG TATTAAGCGGCGGTGAGAAA
Downstream 100 bases:
>100_bases CACCAATCAGCGATAAACCGAGGACTGTCTATCTCATGGGGCAAAGTGACTCACTTTGTCTCCGTGGATTCACAGCTTTA TTCAAACGACTAGAATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Transport System ATPase Component; ATPase Component Of ABC Transporter
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MKLASHQPTQPLLLLDEPDNHLDLDSKIMLAQALNACRGGFILISHDQDFAAESGVSRCVELS
Sequences:
>Translated_63_residues MKLASHQPTQPLLLLDEPDNHLDLDSKIMLAQALNACRGGFILISHDQDFAAESGVSRCVELS >Mature_63_residues MKLASHQPTQPLLLLDEPDNHLDLDSKIMLAQALNACRGGFILISHDQDFAAESGVSRCVELS
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6875; Mature: 6875
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLASHQPTQPLLLLDEPDNHLDLDSKIMLAQALNACRGGFILISHDQDFAAESGVSRCV CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCEE ELS ECC >Mature Secondary Structure MKLASHQPTQPLLLLDEPDNHLDLDSKIMLAQALNACRGGFILISHDQDFAAESGVSRCV CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCEE ELS ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA