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The map label for this gene is ybhS [H]

Identifier: 156977571

GI number: 156977571

Start: 1527355

End: 1528455

Strand: Direct

Name: ybhS [H]

Synonym: VIBHAR_06359

Alternate gene names: 156977571

Gene position: 1527355-1528455 (Clockwise)

Preceding gene: 156977570

Following gene: 156977575

Centisome position: 69.3

GC content: 48.32

Gene sequence:

>1101_bases
ATGATGAAATCTATCGCCCGTATGAAAGCGGTAATGATCAAAGAGATCCGTCAGCTTTCACGTGACCGCATTACCTTTGG
CATGGTCGTGATGATCCCGTTGATTCAGCTCCTGCTATTCGGCTTCGCCATTAATACCGATATTCGCAACATTCCCGTTG
GCGTCGTCGATCAAAGTGGCAGTACTGCCGGGCGCGTGATTACAGAGTCCGTCAAAGTCACGCAAGTTGTCGATGTGGTC
GAAACCTTCGCTACCGCGGAGCAAGCAGAACAAGCCATTCAAGATGGTATCGTTCGTGCGGCTTTGATTCTGCCTAGCGA
TCTCACCCAACGTATGGTGCAAGGTAGAGAGCTTGGTCAGTGGATTGTGGATGGTTCCGACACCATGATCAGCTCAGCGA
TTCTCTCACTACAAACCATGCCGTTAACGGATTTTGATTTTGAGATACGCCCTGCCCCGACCAAAACCTTTGAAGTTGCG
CTGTATTACAACCCGAGTCGGCGCTCGGCGGTGAACATTGTTCCCGGTTTATTGGGGGTGATTCTGACCATGACGATGAT
TTTGTTCACCAGTGCTGCCATTGTTCGTGAACGGGAGCGTGGTAATCTAGAGTTACTGATTACCACACCCATCCACTCTA
TCGAGCTGATGGTGGCAAAGATCATTCCTTACATCTTCGTTGGTTTGATTCAAGTCTTCATCATTCTCGGCTTGGGTCAC
TGGATATTTGATGTACCGATAAACGGTGCCATTAGTCAGATATTGTTTGGCACGCTGTTATTTATCGCCGCGAGTTTAAC
CTTAGGTTTGGTGATATCCACCATTGCGACGACGCAGCTACAAGCGATGCAGATGACAGTGTTTATTCTTCTGCCATCAA
TCTTATTATCAGGGTTTATGTTCCCTTATGAAGGGATGCCCGTTGCGGCACAATGGATATCAGAAGCCCTGCCTGCTACC
CACTTTATGCGCATTATTCGTGGTGTGGTGTTACGTGGTGCAGATTTGATGGAGCTTTGGCGCGATACGCTTTGGCTGCT
TGGGTTTACCGTTATCGGTCTCTTTGTTGCTTCACTTCGCTTCAAGAAGTCACTCGATTAA

Upstream 100 bases:

>100_bases
GGTTAACCCAAACCTTTCCTGAGCTTGAGGGCTGCGAGATGAACATTGCTCGTCCGAGCTTGGAAGATGTGTTTGTCAGC
GTTACGGGGGAAGGTCGCCA

Downstream 100 bases:

>100_bases
CCTACCAGACTCCAGAACTAAAAACGCCTCCAGAATTGGAGGCGTTTTTATTGAATCATTCAATCATCATAGCGAAATCA
GTAATACTCACCTAAAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MMKSIARMKAVMIKEIRQLSRDRITFGMVVMIPLIQLLLFGFAINTDIRNIPVGVVDQSGSTAGRVITESVKVTQVVDVV
ETFATAEQAEQAIQDGIVRAALILPSDLTQRMVQGRELGQWIVDGSDTMISSAILSLQTMPLTDFDFEIRPAPTKTFEVA
LYYNPSRRSAVNIVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPIHSIELMVAKIIPYIFVGLIQVFIILGLGH
WIFDVPINGAISQILFGTLLFIAASLTLGLVISTIATTQLQAMQMTVFILLPSILLSGFMFPYEGMPVAAQWISEALPAT
HFMRIIRGVVLRGADLMELWRDTLWLLGFTVIGLFVASLRFKKSLD

Sequences:

>Translated_366_residues
MMKSIARMKAVMIKEIRQLSRDRITFGMVVMIPLIQLLLFGFAINTDIRNIPVGVVDQSGSTAGRVITESVKVTQVVDVV
ETFATAEQAEQAIQDGIVRAALILPSDLTQRMVQGRELGQWIVDGSDTMISSAILSLQTMPLTDFDFEIRPAPTKTFEVA
LYYNPSRRSAVNIVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPIHSIELMVAKIIPYIFVGLIQVFIILGLGH
WIFDVPINGAISQILFGTLLFIAASLTLGLVISTIATTQLQAMQMTVFILLPSILLSGFMFPYEGMPVAAQWISEALPAT
HFMRIIRGVVLRGADLMELWRDTLWLLGFTVIGLFVASLRFKKSLD
>Mature_366_residues
MMKSIARMKAVMIKEIRQLSRDRITFGMVVMIPLIQLLLFGFAINTDIRNIPVGVVDQSGSTAGRVITESVKVTQVVDVV
ETFATAEQAEQAIQDGIVRAALILPSDLTQRMVQGRELGQWIVDGSDTMISSAILSLQTMPLTDFDFEIRPAPTKTFEVA
LYYNPSRRSAVNIVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPIHSIELMVAKIIPYIFVGLIQVFIILGLGH
WIFDVPINGAISQILFGTLLFIAASLTLGLVISTIATTQLQAMQMTVFILLPSILLSGFMFPYEGMPVAAQWISEALPAT
HFMRIIRGVVLRGADLMELWRDTLWLLGFTVIGLFVASLRFKKSLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=347, Percent_Identity=29.971181556196, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787010, Length=353, Percent_Identity=27.7620396600567, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI48994943, Length=349, Percent_Identity=26.3610315186246, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI226510979, Length=384, Percent_Identity=25.5208333333333, Blast_Score=95, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24650855, Length=401, Percent_Identity=21.6957605985037, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24650853, Length=401, Percent_Identity=21.6957605985037, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI85725260, Length=370, Percent_Identity=22.1621621621622, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85725262, Length=370, Percent_Identity=22.1621621621622, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40471; Mature: 40471

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSIARMKAVMIKEIRQLSRDRITFGMVVMIPLIQLLLFGFAINTDIRNIPVGVVDQSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
STAGRVITESVKVTQVVDVVETFATAEQAEQAIQDGIVRAALILPSDLTQRMVQGRELGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WIVDGSDTMISSAILSLQTMPLTDFDFEIRPAPTKTFEVALYYNPSRRSAVNIVPGLLGV
HHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
ILTMTMILFTSAAIVRERERGNLELLITTPIHSIELMVAKIIPYIFVGLIQVFIILGLGH
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
WIFDVPINGAISQILFGTLLFIAASLTLGLVISTIATTQLQAMQMTVFILLPSILLSGFM
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FPYEGMPVAAQWISEALPATHFMRIIRGVVLRGADLMELWRDTLWLLGFTVIGLFVASLR
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKSLD
HHHCCC
>Mature Secondary Structure
MMKSIARMKAVMIKEIRQLSRDRITFGMVVMIPLIQLLLFGFAINTDIRNIPVGVVDQSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
STAGRVITESVKVTQVVDVVETFATAEQAEQAIQDGIVRAALILPSDLTQRMVQGRELGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WIVDGSDTMISSAILSLQTMPLTDFDFEIRPAPTKTFEVALYYNPSRRSAVNIVPGLLGV
HHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
ILTMTMILFTSAAIVRERERGNLELLITTPIHSIELMVAKIIPYIFVGLIQVFIILGLGH
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
WIFDVPINGAISQILFGTLLFIAASLTLGLVISTIATTQLQAMQMTVFILLPSILLSGFM
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FPYEGMPVAAQWISEALPATHFMRIIRGVVLRGADLMELWRDTLWLLGFTVIGLFVASLR
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKSLD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]