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The map label for this gene is dan [H]

Identifier: 156977565

GI number: 156977565

Start: 1521258

End: 1522703

Strand: Reverse

Name: dan [H]

Synonym: VIBHAR_06353

Alternate gene names: 156977565

Gene position: 1522703-1521258 (Counterclockwise)

Preceding gene: 156977572

Following gene: 156977564

Centisome position: 69.09

GC content: 47.58

Gene sequence:

>1446_bases
ATGTTGTTCGATACCATTATCAAAAGCGTAGAGGTATTTGACGGTACGGGTGCAGCACCATTCATTGCTGATGTTGCGAT
TCGTCAAGATCGTATTGAGCAAGTAGGGCAGCTAGACGAGCTTTCTGCAAAGAAGGTTATCAACGGTCAGGGTCTTGCGT
TGGCTCCGGGATTTATTGATGTGCACACGCACGATGACACCAATGTGATTCGTTACCCTGACTGCTTGCCAAAGATCAGC
CAAGGCGTGACAACGGTAATCGTAGGCAATTGCGGAATTAGCGCGAGCCCTGCGGTACTCAGTGATACTCCGCCAGACCC
AATGAACCTATTGGGCAAGCAGGAAGACTTCAAATACCCAACTTTTGCGGAGTATGCGAAGGCGGTACAAGCGGCGGGCC
CTGCGGTCAACGTTGCTGCGTTAGTTGGTCACACAACTTTACGTAACAACGTGATGGACGACTTACTGCGCACGGCTACC
GATGAAGAAATCGAGCAAATGCGCCAAACACTGGCACAAGCGATGGAAGAGGGCGCATTGGGTTTGAGCTCGGGTCTTGC
TTATGCGAGTGCCAAGCAAGCCAACGCGGATGAAGTGATGCGCCTAGCGGAAATTCTCGGTCATCACGGTGGTATCTACA
CCACGCACATGCGGACTGAGTTTGAAGAAATCATCAGCGCAATGGAAGAAGCCTTTGAAACTGGGCAGTACGCCAAAGTG
CCCGTGGTGATTTCTCACCTTAAATGCGCTGGTGCAGGTAACTGGGGACGTACGGTAGAAGTGCTGGATTTGATGGATAA
GGTTTCTGAGCATCAAGACGTGTCTTGCGATTGCTATCCATATTCTGCAAGTTCTTCAACGCTGGATTTAAAACAGGTGA
CGGATGAAATCGACATCTTCATCACTTGGTCTGAAAGTAAACCTGAACACGCTGGCAAGATGCTGAAAGACATTGCTGAT
GAGATGCAACTGCCTCTTATGGAAACGGCGAAAGCGTTGCAACCTGCGGGCGCGGTTTATCACTGCATGGATGAAAACGA
CGTCAAACGTGTCCTTAAGTATAAGTTGACTATGGTGGGCTCGGATGGATTACCAAATGACCCGCATCCACATCCACGTT
TGTGGGGCACGTTCCCGAAAGTCTTGGGGCATTACTGCCGTGAAGAACAGCTTTTCCCATTGGCAGAAGCGATTCACAAG
ATGACGGGGATGTCAGCAACACGCTACCAACTGAAAGATCGTGGGGAAATAAAAACAGGTGCTTACGCGGACTTGGTTTT
ATTTAACCCAAATACAATTAAAGATACAGCAACGTTCGAAAATCCAATTTCTGTCGCGCAAGGTATTGAATCTGTATTTG
TAAATGGCGAGCTATCTTATTTAAAAGATAAAGTCACCGAAAATAGAAATGGTGTATTTATTTATCGAAATAATACCCAT
CAATAA

Upstream 100 bases:

>100_bases
GTGTCAAACAAGTCTGGGTTTTTTGTGTGTTTCTTCACTGTTTAAATTTCAAGAATTATTAAGATGGAATCATGTTAACG
ACGGACGAAGAGAGTGAAGT

Downstream 100 bases:

>100_bases
CTTATTAAATAAATTAATTTTATAGATTAAGCATTATCACTGGAGAATATTATGTCAATTAAACGTTATGGTGTAGAAGG
CGGCGTAGGTACTGGCGGTC

Product: N-acyl-D-glutamate deacylase protein

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MLFDTIIKSVEVFDGTGAAPFIADVAIRQDRIEQVGQLDELSAKKVINGQGLALAPGFIDVHTHDDTNVIRYPDCLPKIS
QGVTTVIVGNCGISASPAVLSDTPPDPMNLLGKQEDFKYPTFAEYAKAVQAAGPAVNVAALVGHTTLRNNVMDDLLRTAT
DEEIEQMRQTLAQAMEEGALGLSSGLAYASAKQANADEVMRLAEILGHHGGIYTTHMRTEFEEIISAMEEAFETGQYAKV
PVVISHLKCAGAGNWGRTVEVLDLMDKVSEHQDVSCDCYPYSASSSTLDLKQVTDEIDIFITWSESKPEHAGKMLKDIAD
EMQLPLMETAKALQPAGAVYHCMDENDVKRVLKYKLTMVGSDGLPNDPHPHPRLWGTFPKVLGHYCREEQLFPLAEAIHK
MTGMSATRYQLKDRGEIKTGAYADLVLFNPNTIKDTATFENPISVAQGIESVFVNGELSYLKDKVTENRNGVFIYRNNTH
Q

Sequences:

>Translated_481_residues
MLFDTIIKSVEVFDGTGAAPFIADVAIRQDRIEQVGQLDELSAKKVINGQGLALAPGFIDVHTHDDTNVIRYPDCLPKIS
QGVTTVIVGNCGISASPAVLSDTPPDPMNLLGKQEDFKYPTFAEYAKAVQAAGPAVNVAALVGHTTLRNNVMDDLLRTAT
DEEIEQMRQTLAQAMEEGALGLSSGLAYASAKQANADEVMRLAEILGHHGGIYTTHMRTEFEEIISAMEEAFETGQYAKV
PVVISHLKCAGAGNWGRTVEVLDLMDKVSEHQDVSCDCYPYSASSSTLDLKQVTDEIDIFITWSESKPEHAGKMLKDIAD
EMQLPLMETAKALQPAGAVYHCMDENDVKRVLKYKLTMVGSDGLPNDPHPHPRLWGTFPKVLGHYCREEQLFPLAEAIHK
MTGMSATRYQLKDRGEIKTGAYADLVLFNPNTIKDTATFENPISVAQGIESVFVNGELSYLKDKVTENRNGVFIYRNNTH
Q
>Mature_481_residues
MLFDTIIKSVEVFDGTGAAPFIADVAIRQDRIEQVGQLDELSAKKVINGQGLALAPGFIDVHTHDDTNVIRYPDCLPKIS
QGVTTVIVGNCGISASPAVLSDTPPDPMNLLGKQEDFKYPTFAEYAKAVQAAGPAVNVAALVGHTTLRNNVMDDLLRTAT
DEEIEQMRQTLAQAMEEGALGLSSGLAYASAKQANADEVMRLAEILGHHGGIYTTHMRTEFEEIISAMEEAFETGQYAKV
PVVISHLKCAGAGNWGRTVEVLDLMDKVSEHQDVSCDCYPYSASSSTLDLKQVTDEIDIFITWSESKPEHAGKMLKDIAD
EMQLPLMETAKALQPAGAVYHCMDENDVKRVLKYKLTMVGSDGLPNDPHPHPRLWGTFPKVLGHYCREEQLFPLAEAIHK
MTGMSATRYQLKDRGEIKTGAYADLVLFNPNTIKDTATFENPISVAQGIESVFVNGELSYLKDKVTENRNGVFIYRNNTH
Q

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 52779; Mature: 52779

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFDTIIKSVEVFDGTGAAPFIADVAIRQDRIEQVGQLDELSAKKVINGQGLALAPGFID
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCEEE
VHTHDDTNVIRYPDCLPKISQGVTTVIVGNCGISASPAVLSDTPPDPMNLLGKQEDFKYP
EEECCCCCEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
TFAEYAKAVQAAGPAVNVAALVGHTTLRNNVMDDLLRTATDEEIEQMRQTLAQAMEEGAL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
GLSSGLAYASAKQANADEVMRLAEILGHHGGIYTTHMRTEFEEIISAMEEAFETGQYAKV
CHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCH
PVVISHLKCAGAGNWGRTVEVLDLMDKVSEHQDVSCDCYPYSASSSTLDLKQVTDEIDIF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHCCEEEE
ITWSESKPEHAGKMLKDIADEMQLPLMETAKALQPAGAVYHCMDENDVKRVLKYKLTMVG
EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEC
SDGLPNDPHPHPRLWGTFPKVLGHYCREEQLFPLAEAIHKMTGMSATRYQLKDRGEIKTG
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCC
AYADLVLFNPNTIKDTATFENPISVAQGIESVFVNGELSYLKDKVTENRNGVFIYRNNTH
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEECCCC
Q
C
>Mature Secondary Structure
MLFDTIIKSVEVFDGTGAAPFIADVAIRQDRIEQVGQLDELSAKKVINGQGLALAPGFID
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCEEE
VHTHDDTNVIRYPDCLPKISQGVTTVIVGNCGISASPAVLSDTPPDPMNLLGKQEDFKYP
EEECCCCCEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
TFAEYAKAVQAAGPAVNVAALVGHTTLRNNVMDDLLRTATDEEIEQMRQTLAQAMEEGAL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
GLSSGLAYASAKQANADEVMRLAEILGHHGGIYTTHMRTEFEEIISAMEEAFETGQYAKV
CHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCH
PVVISHLKCAGAGNWGRTVEVLDLMDKVSEHQDVSCDCYPYSASSSTLDLKQVTDEIDIF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHCCEEEE
ITWSESKPEHAGKMLKDIADEMQLPLMETAKALQPAGAVYHCMDENDVKRVLKYKLTMVG
EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEC
SDGLPNDPHPHPRLWGTFPKVLGHYCREEQLFPLAEAIHKMTGMSATRYQLKDRGEIKTG
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCC
AYADLVLFNPNTIKDTATFENPISVAQGIESVFVNGELSYLKDKVTENRNGVFIYRNNTH
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEECCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]