| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is sglT [H]
Identifier: 156977562
GI number: 156977562
Start: 1517953
End: 1519473
Strand: Reverse
Name: sglT [H]
Synonym: VIBHAR_06350
Alternate gene names: 156977562
Gene position: 1519473-1517953 (Counterclockwise)
Preceding gene: 156977564
Following gene: 156977561
Centisome position: 68.94
GC content: 48.13
Gene sequence:
>1521_bases ATGAACAGTACACTTTTTCTTACCGGCTTCGGTGCGTATGTCTTATTTTTAATTTGGTTGGGATGGTTTGTCTCTCGCAA TCAAAAATCAGGTGAAGACTTTCTACTCGGTGGTCGAGGCTTACCTCTGTTCCTCGTATTAGGTACCACGGTAGCAACCA TGGTTAGCACTGGCTCTAGTATGGGCGCGGTTGGCTTTGGTTATTCAAACGGTTGGGCTGGTGCGCTTTACGGCATTGGT GGCGCAATTGGTATCTTGTTATTGGCACTGTGGTTTGCGCCAGTTCGTAAACTCAACTTTATGACTATGAGTGAAGAGCT CGCATACTACGTAGGTGCAAACCGCATCGTGAAGAACGTGGTTGGTCTGCTTATCTTTATCGCTTCTATTGGCTGGTTGG GCGCACACATCCTTGGTGGTGGTATGTACCTCGCGTGGATTGCCGATATTGAGCTGAGCACTGCCAAGATGATCATCGCA GCAGCGTTTACCATTTACGTTGTTATTGGCGGCTACACTGCGGTGGTTTGGACGGACACCATTCAAGCTATCATCTTATT CATTGGCTTCATCCTAATGGCGGTACTGTCTGTGCAACACATTGGCGGCTTGGATAACCTCTACTCTGCCATGGACCCAG AAGCGGTTAGCTTCCTTGCGATTGATAAGCTTGGTTTAATCCCAGCAGTTTCTCTTGCTGTTGTGATTGGTGTGGGTGTA CTTGCAACGCCTTCATTCCGCCAACGTATCTACTCAGGCAAAGATGTATCAACCATCCGCGGTTCATTCGTAGCGTCTGG TGTGTTGTACTTGTTCTTCTCCATCATCCCTGCAGTCATTGGTATGGCGGCGCATGCGATTGACCCCGAGCTGAATAATG CAAACTTTGCTTTCCCATACATCGCGGCAACGGTATTGCCAGTAGGTGTTGGTCTTATCGTTCTGATTGCAGGTCTATCA GCAACCATGTCGAGTGCGAGTTCCGATGCGATTGCGGGCGTTTCTATCCTACTGCGTGATGTTTACGTCATGTTCACCGG TCGCGTGCCAAACAAAGAATCTATGTTGAATTACTCTCGCTTGGCTTTGGTTGTGGTGATCGGTTGTGCATTGCTGTTCG CTCTAACTTCGAACGACATCATCGGCTACATCACTAAGATGATCTCGACAGTTATGTCTGGCATGTTCGTGTGCGGTATG TTGGGTCGCTTCTGGAAGCGTTACAACTGGCAAGGTGCATTGGCAACATTGGCAGGTGCGTCTATCGCTTCATTTTCAGT AATGATGAGCCCTGACCTAACCGCTTTCTGGGGCAACCCAGTGATTCCATCTTGCTTGTTTGCTCTAACTGCTGGTGTGG CAGTGAGCCTAGTGACTCCAGCTAACCAAGTGTCACCAGAAATGGCACGAGCAATCCTAGATGATGAGCGTGCTCTGATG GAAATGGAACTGTCTGACGATGGTGTTCTAGAAGAAGATGCTTCATTAAAAAACCGTACAACAGCAAATCAAAACGCTTA A
Upstream 100 bases:
>100_bases ACTATAAAAATAAAATTAGATAATTTCTGGAATAAAATCTAATACTTGCTGCTGGAATTATATCAATCTGAAAGATGGAT TTTGATATGAGAGGTGTTCA
Downstream 100 bases:
>100_bases CAGCAAAGAGTTTCGGCTCGAACAGAAACTCGCTCATTAGCTCCTGACAAACTGGTGGCTCCCCCGAGCCACCATTCTAA ATTTATCCAAAGTAGGTGAA
Product: hypothetical protein
Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MNSTLFLTGFGAYVLFLIWLGWFVSRNQKSGEDFLLGGRGLPLFLVLGTTVATMVSTGSSMGAVGFGYSNGWAGALYGIG GAIGILLLALWFAPVRKLNFMTMSEELAYYVGANRIVKNVVGLLIFIASIGWLGAHILGGGMYLAWIADIELSTAKMIIA AAFTIYVVIGGYTAVVWTDTIQAIILFIGFILMAVLSVQHIGGLDNLYSAMDPEAVSFLAIDKLGLIPAVSLAVVIGVGV LATPSFRQRIYSGKDVSTIRGSFVASGVLYLFFSIIPAVIGMAAHAIDPELNNANFAFPYIAATVLPVGVGLIVLIAGLS ATMSSASSDAIAGVSILLRDVYVMFTGRVPNKESMLNYSRLALVVVIGCALLFALTSNDIIGYITKMISTVMSGMFVCGM LGRFWKRYNWQGALATLAGASIASFSVMMSPDLTAFWGNPVIPSCLFALTAGVAVSLVTPANQVSPEMARAILDDERALM EMELSDDGVLEEDASLKNRTTANQNA
Sequences:
>Translated_506_residues MNSTLFLTGFGAYVLFLIWLGWFVSRNQKSGEDFLLGGRGLPLFLVLGTTVATMVSTGSSMGAVGFGYSNGWAGALYGIG GAIGILLLALWFAPVRKLNFMTMSEELAYYVGANRIVKNVVGLLIFIASIGWLGAHILGGGMYLAWIADIELSTAKMIIA AAFTIYVVIGGYTAVVWTDTIQAIILFIGFILMAVLSVQHIGGLDNLYSAMDPEAVSFLAIDKLGLIPAVSLAVVIGVGV LATPSFRQRIYSGKDVSTIRGSFVASGVLYLFFSIIPAVIGMAAHAIDPELNNANFAFPYIAATVLPVGVGLIVLIAGLS ATMSSASSDAIAGVSILLRDVYVMFTGRVPNKESMLNYSRLALVVVIGCALLFALTSNDIIGYITKMISTVMSGMFVCGM LGRFWKRYNWQGALATLAGASIASFSVMMSPDLTAFWGNPVIPSCLFALTAGVAVSLVTPANQVSPEMARAILDDERALM EMELSDDGVLEEDASLKNRTTANQNA >Mature_506_residues MNSTLFLTGFGAYVLFLIWLGWFVSRNQKSGEDFLLGGRGLPLFLVLGTTVATMVSTGSSMGAVGFGYSNGWAGALYGIG GAIGILLLALWFAPVRKLNFMTMSEELAYYVGANRIVKNVVGLLIFIASIGWLGAHILGGGMYLAWIADIELSTAKMIIA AAFTIYVVIGGYTAVVWTDTIQAIILFIGFILMAVLSVQHIGGLDNLYSAMDPEAVSFLAIDKLGLIPAVSLAVVIGVGV LATPSFRQRIYSGKDVSTIRGSFVASGVLYLFFSIIPAVIGMAAHAIDPELNNANFAFPYIAATVLPVGVGLIVLIAGLS ATMSSASSDAIAGVSILLRDVYVMFTGRVPNKESMLNYSRLALVVVIGCALLFALTSNDIIGYITKMISTVMSGMFVCGM LGRFWKRYNWQGALATLAGASIASFSVMMSPDLTAFWGNPVIPSCLFALTAGVAVSLVTPANQVSPEMARAILDDERALM EMELSDDGVLEEDASLKNRTTANQNA
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=435, Percent_Identity=25.5172413793103, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI4507031, Length=441, Percent_Identity=23.3560090702948, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI110835708, Length=457, Percent_Identity=21.4442013129103, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI17941285, Length=448, Percent_Identity=22.7678571428571, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI206597483, Length=383, Percent_Identity=25.8485639686684, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI4507033, Length=503, Percent_Identity=22.2664015904573, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI87082237, Length=453, Percent_Identity=22.9580573951435, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787251, Length=382, Percent_Identity=24.869109947644, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790503, Length=425, Percent_Identity=22.3529411764706, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17539284, Length=407, Percent_Identity=25.0614250614251, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648033, Length=401, Percent_Identity=26.6832917705736, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356865, Length=401, Percent_Identity=26.6832917705736, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 53625; Mature: 53625
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTLFLTGFGAYVLFLIWLGWFVSRNQKSGEDFLLGGRGLPLFLVLGTTVATMVSTGSS CCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCC MGAVGFGYSNGWAGALYGIGGAIGILLLALWFAPVRKLNFMTMSEELAYYVGANRIVKNV CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLLIFIASIGWLGAHILGGGMYLAWIADIELSTAKMIIAAAFTIYVVIGGYTAVVWTDT HHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEEHHH IQAIILFIGFILMAVLSVQHIGGLDNLYSAMDPEAVSFLAIDKLGLIPAVSLAVVIGVGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LATPSFRQRIYSGKDVSTIRGSFVASGVLYLFFSIIPAVIGMAAHAIDPELNNANFAFPY HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH IAATVLPVGVGLIVLIAGLSATMSSASSDAIAGVSILLRDVYVMFTGRVPNKESMLNYSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LALVVVIGCALLFALTSNDIIGYITKMISTVMSGMFVCGMLGRFWKRYNWQGALATLAGA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC SIASFSVMMSPDLTAFWGNPVIPSCLFALTAGVAVSLVTPANQVSPEMARAILDDERALM HHHHEEEEECCCCCEECCCCCHHHHHHHHHHHHHEEEECCCHHCCHHHHHHHHCCCHHHH EMELSDDGVLEEDASLKNRTTANQNA EEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSTLFLTGFGAYVLFLIWLGWFVSRNQKSGEDFLLGGRGLPLFLVLGTTVATMVSTGSS CCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCC MGAVGFGYSNGWAGALYGIGGAIGILLLALWFAPVRKLNFMTMSEELAYYVGANRIVKNV CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLLIFIASIGWLGAHILGGGMYLAWIADIELSTAKMIIAAAFTIYVVIGGYTAVVWTDT HHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEEHHH IQAIILFIGFILMAVLSVQHIGGLDNLYSAMDPEAVSFLAIDKLGLIPAVSLAVVIGVGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LATPSFRQRIYSGKDVSTIRGSFVASGVLYLFFSIIPAVIGMAAHAIDPELNNANFAFPY HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH IAATVLPVGVGLIVLIAGLSATMSSASSDAIAGVSILLRDVYVMFTGRVPNKESMLNYSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LALVVVIGCALLFALTSNDIIGYITKMISTVMSGMFVCGMLGRFWKRYNWQGALATLAGA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC SIASFSVMMSPDLTAFWGNPVIPSCLFALTAGVAVSLVTPANQVSPEMARAILDDERALM HHHHEEEEECCCCCEECCCCCHHHHHHHHHHHHHEEEECCCHHCCHHHHHHHHCCCHHHH EMELSDDGVLEEDASLKNRTTANQNA EEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]