| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977540
Identifier: 156977540
GI number: 156977540
Start: 1500487
End: 1501026
Strand: Direct
Name: 156977540
Synonym: VIBHAR_06328
Alternate gene names: NA
Gene position: 1500487-1501026 (Clockwise)
Preceding gene: 156977539
Following gene: 156977542
Centisome position: 68.08
GC content: 47.22
Gene sequence:
>540_bases ATGGCAACTTCAGTGAAACTTAAAGCGGGCGACAGCTTCCCTTCTCTTCAAGCAACCTTGCTAGATGGTTCAAGCGTGAC GTTAGGTCAGCCGCAAGGTGATGCGACTTGGCAAGCGGTATTCGTTTATCGTGGTAAACACTGTCCTCTTTGTACCAAAT ACCTCAATGAGTTAGAGGGATATAAGCAAGCTTTCGCAGAAGCAGGCGTTGATATTCTTGCGGTTTCTGGCGATTCAAAA GAGCAGCTTGAGGGGCATCTAGAGAAACTCGAAATCAGCTTCCCGATTGCTTACGGCCTAACCGAAGAACAAATGAAAAC ATTAGGTCTGTACATTTCACTGCCTCGTTCAGAGCAAGAGACTGACCATAACTTCGCAGAACCAGGTCTGTTTGTAGTAA ATGAACACGGCAACTTGCACGTGGTGGATATTTCAAACAACCCGTTTGTTCGCCCTGAGCTTGGCGCGCTATCACGTGGT TTGGCTTGGATTCGTAATCCAGACAACAACTACCCTATCCGTGGTACGTCGGACTACTAA
Upstream 100 bases:
>100_bases ATGCCATAAAACTAGGTCTACATTGAAGTCTCACCCCCTACACAATCGCTTTTATTGAGAAGGGGAACCATGGATATATA CCACCAATTCGGGAGTCATT
Downstream 100 bases:
>100_bases GCGGATTACGCCTAATCAGTCTCAGACAACCATCAAAATCGAGTAGGAGGAGGCCTCACGGCCTCCGTCCTCTCACACCA CCGTACAAGCGTGGGTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin Peroxidase; Redoxin Domain-Containing Protein; AhpC/TSA Family Protein; Antioxidant AhpC/TSA Family; Peroxiredoxin
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MATSVKLKAGDSFPSLQATLLDGSSVTLGQPQGDATWQAVFVYRGKHCPLCTKYLNELEGYKQAFAEAGVDILAVSGDSK EQLEGHLEKLEISFPIAYGLTEEQMKTLGLYISLPRSEQETDHNFAEPGLFVVNEHGNLHVVDISNNPFVRPELGALSRG LAWIRNPDNNYPIRGTSDY
Sequences:
>Translated_179_residues MATSVKLKAGDSFPSLQATLLDGSSVTLGQPQGDATWQAVFVYRGKHCPLCTKYLNELEGYKQAFAEAGVDILAVSGDSK EQLEGHLEKLEISFPIAYGLTEEQMKTLGLYISLPRSEQETDHNFAEPGLFVVNEHGNLHVVDISNNPFVRPELGALSRG LAWIRNPDNNYPIRGTSDY >Mature_178_residues ATSVKLKAGDSFPSLQATLLDGSSVTLGQPQGDATWQAVFVYRGKHCPLCTKYLNELEGYKQAFAEAGVDILAVSGDSKE QLEGHLEKLEISFPIAYGLTEEQMKTLGLYISLPRSEQETDHNFAEPGLFVVNEHGNLHVVDISNNPFVRPELGALSRGL AWIRNPDNNYPIRGTSDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19684; Mature: 19553
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSVKLKAGDSFPSLQATLLDGSSVTLGQPQGDATWQAVFVYRGKHCPLCTKYLNELEG CCCEEEEECCCCCCCEEEEEECCCEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH YKQAFAEAGVDILAVSGDSKEQLEGHLEKLEISFPIAYGLTEEQMKTLGLYISLPRSEQE HHHHHHHCCCEEEEECCCCHHHHHHHHHEEEEECEEEECCCHHHHHHEEEEEECCCCCCC TDHNFAEPGLFVVNEHGNLHVVDISNNPFVRPELGALSRGLAWIRNPDNNYPIRGTSDY CCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure ATSVKLKAGDSFPSLQATLLDGSSVTLGQPQGDATWQAVFVYRGKHCPLCTKYLNELEG CCEEEEECCCCCCCEEEEEECCCEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH YKQAFAEAGVDILAVSGDSKEQLEGHLEKLEISFPIAYGLTEEQMKTLGLYISLPRSEQE HHHHHHHCCCEEEEECCCCHHHHHHHHHEEEEECEEEECCCHHHHHHEEEEEECCCCCCC TDHNFAEPGLFVVNEHGNLHVVDISNNPFVRPELGALSRGLAWIRNPDNNYPIRGTSDY CCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA