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The map label for this gene is ygaZ [H]

Identifier: 156977493

GI number: 156977493

Start: 1460587

End: 1461330

Strand: Direct

Name: ygaZ [H]

Synonym: VIBHAR_06280

Alternate gene names: 156977493

Gene position: 1460587-1461330 (Clockwise)

Preceding gene: 156977492

Following gene: 156977494

Centisome position: 66.27

GC content: 48.66

Gene sequence:

>744_bases
ATGGATACTATTTTGCCTACTCATCAAGACTCAAAGTCATCACTCTTTTTACAAGGTACGATCGCAATGATGCCATTGAG
CATCGCCGTATTGCCTTGGGGGTTACTCGCCGGGTCATTTGCCATCGATACTGGCTTACACCCTATGGAAGGCCAGGCGC
TCTCCGCCATTCTGTTTGCAGGCTCAGTGCAACTTGTCGCGATGGGAATGATTAAAGCAGGCGCTGGCCTAACCAGCCTG
TTGCTCGCCACGTTTTTCATCACCTGTCGCCACTTTCTCTACGGTGTTTCGATGCGCAGTAAAATATCACCGCTGCCTCT
AAAGTGGCGACTTTCGTTAGGGTTCTTACTTACCGATGAGCTGTTTGCCATTGCTGGGCACCAATCCGATAAGCAATTCG
ATCGATGGTACGCCCTTGGCGCTGGGTTAAGTTTCTATCTGTTTTGGAACTTCGCAACGCTTACTGGCATCGTCGCAGGC
AGTTTGATACCTGAATTAAATGAGCTCGGATTGGAATTTGCCGTTGCAGCTACCTTCATCGCGATTGTGGTCCCAACGAT
AAAAAGTATTCCCGTGTTATGCAGTGTGTTGGTGGCATTAGTTAGCTCTGTGACCCTGAACTATTACCAAGTGGAAGGAG
GCTTAATGATAGCCAGTATTCTCGCCATGTTGACGGGCTATTTTGTGGAACAATTTACGACGAAGACACCAAGCCTTGAA
AGCACGCTGGAGGAACGCCAATGA

Upstream 100 bases:

>100_bases
CACCTGGGCAGTACATCAAGCATTGTTAGCAATATTGTACAAGGCAACATGCTGAGGTCAGCCTACCTTAACAGTATGTT
TTTCTATTCAAGTTGAAGTT

Downstream 100 bases:

>100_bases
TTTTTTTGTCTATCTTAGCCATGACAGCGTTGGTATTCACCAGCCGTTATCTGTTCTTAGAACCGAAATTGCCGCTTAGG
TTGGGAGTAAGAACTCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDTILPTHQDSKSSLFLQGTIAMMPLSIAVLPWGLLAGSFAIDTGLHPMEGQALSAILFAGSVQLVAMGMIKAGAGLTSL
LLATFFITCRHFLYGVSMRSKISPLPLKWRLSLGFLLTDELFAIAGHQSDKQFDRWYALGAGLSFYLFWNFATLTGIVAG
SLIPELNELGLEFAVAATFIAIVVPTIKSIPVLCSVLVALVSSVTLNYYQVEGGLMIASILAMLTGYFVEQFTTKTPSLE
STLEERQ

Sequences:

>Translated_247_residues
MDTILPTHQDSKSSLFLQGTIAMMPLSIAVLPWGLLAGSFAIDTGLHPMEGQALSAILFAGSVQLVAMGMIKAGAGLTSL
LLATFFITCRHFLYGVSMRSKISPLPLKWRLSLGFLLTDELFAIAGHQSDKQFDRWYALGAGLSFYLFWNFATLTGIVAG
SLIPELNELGLEFAVAATFIAIVVPTIKSIPVLCSVLVALVSSVTLNYYQVEGGLMIASILAMLTGYFVEQFTTKTPSLE
STLEERQ
>Mature_247_residues
MDTILPTHQDSKSSLFLQGTIAMMPLSIAVLPWGLLAGSFAIDTGLHPMEGQALSAILFAGSVQLVAMGMIKAGAGLTSL
LLATFFITCRHFLYGVSMRSKISPLPLKWRLSLGFLLTDELFAIAGHQSDKQFDRWYALGAGLSFYLFWNFATLTGIVAG
SLIPELNELGLEFAVAATFIAIVVPTIKSIPVLCSVLVALVSSVTLNYYQVEGGLMIASILAMLTGYFVEQFTTKTPSLE
STLEERQ

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=212, Percent_Identity=31.6037735849057, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26679; Mature: 26679

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTILPTHQDSKSSLFLQGTIAMMPLSIAVLPWGLLAGSFAIDTGLHPMEGQALSAILFA
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHH
GSVQLVAMGMIKAGAGLTSLLLATFFITCRHFLYGVSMRSKISPLPLKWRLSLGFLLTDE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECHHHHHH
LFAIAGHQSDKQFDRWYALGAGLSFYLFWNFATLTGIVAGSLIPELNELGLEFAVAATFI
HHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVVPTIKSIPVLCSVLVALVSSVTLNYYQVEGGLMIASILAMLTGYFVEQFTTKTPSLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHH
STLEERQ
HHHHHCC
>Mature Secondary Structure
MDTILPTHQDSKSSLFLQGTIAMMPLSIAVLPWGLLAGSFAIDTGLHPMEGQALSAILFA
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHH
GSVQLVAMGMIKAGAGLTSLLLATFFITCRHFLYGVSMRSKISPLPLKWRLSLGFLLTDE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECHHHHHH
LFAIAGHQSDKQFDRWYALGAGLSFYLFWNFATLTGIVAGSLIPELNELGLEFAVAATFI
HHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVVPTIKSIPVLCSVLVALVSSVTLNYYQVEGGLMIASILAMLTGYFVEQFTTKTPSLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHH
STLEERQ
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]