| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is ctaE [H]
Identifier: 156977482
GI number: 156977482
Start: 1450443
End: 1451327
Strand: Reverse
Name: ctaE [H]
Synonym: VIBHAR_06269
Alternate gene names: 156977482
Gene position: 1451327-1450443 (Counterclockwise)
Preceding gene: 156977483
Following gene: 156977481
Centisome position: 65.85
GC content: 47.01
Gene sequence:
>885_bases ATGAGTAACAAGCCTGAGACCTATTATGTTCCTGCACAGAGCAGCTGGCCTATTGTTGGGGCATTTGCGTTATTCCTTGT TGCGGTCGGTGCTGGGATGACGGTACAAGGTACCCAAAGTGATGGTGCGGTTGGCACACTTGGCGGCATTATTCTCGCGG TTGGTATGCTGTTTCTGCTTTACATGCTAGCAGGGTGGTTCAGTAACGTTATCACGGAGTCCCTTACCGGAAAATACAGT GCGCAAATCACGCGTTCATTTAGACAAGGGATGAGTTGGTTCATCTTTTCAGAAGTGATGTTCTTTGGCGCGTTCTTTGG TGCCCTGTTTTACGCGAGAATGATTTCGGTACCTTGGTTAGGCGGTGCCGATAACAACTTCATGACCCATGAAGTGTTGT GGCCAAGTTTTGAGGCGATATGGCCGCTCACCACGACGCCAGGTGGGGAAACAACGCAAGCTATGCCATGGCAAGGGATT CCATTAACCAACACTATCTTGCTGTTATTGTCTTCGATTACCTTACATATGGCACACATTAGCTTAGAACAAGACAAGCG AACCGCATTGATTGTTTGGTTGGAAATCACTATCGTCTTGGCGGGCTTCTTCCTTTATTACCAAGCCGTTGAGTATGCCC ACGCTTATCAAGACATTGGACTAACGCTGCAATCCGGTATTTACGGAAACACCTTCTTTATGCTCACGGGCTTCCATGGT TTGCACGTTTGCCTCGGTACCATTTTCCTCATCGTATTGCTGTTCCGTATCGCCAAAGAACACTTTTCACCTAAGAACCA TTTTGCATTCCAAGCGGGTAGTTGGTATTGGCACTTCGTTGATGTGGTTTGGCTATGCTTGTTTGTTTTCGTTTATGTGC TGTAA
Upstream 100 bases:
>100_bases ACACACTCTACAAATTTCCTCCTCAATCGGGCGAGTCGTCGGTAGTTAGCCTCTCAAGGAGTGAGCAACAGGCGGGTGAG CGTCTGTAAGGAGAGAACTT
Downstream 100 bases:
>100_bases AGCTAGTAAGGGCGAGGGTTAGGGGCTATCCATCCCGCCCCTAGAGCAATCAGGAGGAGTATCACGACTAACGCAGAAAA CATGACACGACGACCGAGGT
Product: cytochrome c oxidase, subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSNKPETYYVPAQSSWPIVGAFALFLVAVGAGMTVQGTQSDGAVGTLGGIILAVGMLFLLYMLAGWFSNVITESLTGKYS AQITRSFRQGMSWFIFSEVMFFGAFFGALFYARMISVPWLGGADNNFMTHEVLWPSFEAIWPLTTTPGGETTQAMPWQGI PLTNTILLLLSSITLHMAHISLEQDKRTALIVWLEITIVLAGFFLYYQAVEYAHAYQDIGLTLQSGIYGNTFFMLTGFHG LHVCLGTIFLIVLLFRIAKEHFSPKNHFAFQAGSWYWHFVDVVWLCLFVFVYVL
Sequences:
>Translated_294_residues MSNKPETYYVPAQSSWPIVGAFALFLVAVGAGMTVQGTQSDGAVGTLGGIILAVGMLFLLYMLAGWFSNVITESLTGKYS AQITRSFRQGMSWFIFSEVMFFGAFFGALFYARMISVPWLGGADNNFMTHEVLWPSFEAIWPLTTTPGGETTQAMPWQGI PLTNTILLLLSSITLHMAHISLEQDKRTALIVWLEITIVLAGFFLYYQAVEYAHAYQDIGLTLQSGIYGNTFFMLTGFHG LHVCLGTIFLIVLLFRIAKEHFSPKNHFAFQAGSWYWHFVDVVWLCLFVFVYVL >Mature_293_residues SNKPETYYVPAQSSWPIVGAFALFLVAVGAGMTVQGTQSDGAVGTLGGIILAVGMLFLLYMLAGWFSNVITESLTGKYSA QITRSFRQGMSWFIFSEVMFFGAFFGALFYARMISVPWLGGADNNFMTHEVLWPSFEAIWPLTTTPGGETTQAMPWQGIP LTNTILLLLSSITLHMAHISLEQDKRTALIVWLEITIVLAGFFLYYQAVEYAHAYQDIGLTLQSGIYGNTFFMLTGFHGL HVCLGTIFLIVLLFRIAKEHFSPKNHFAFQAGSWYWHFVDVVWLCLFVFVYVL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=293, Percent_Identity=35.4948805460751, Blast_Score=140, Evalue=1e-33, Organism=Escherichia coli, GI1786633, Length=149, Percent_Identity=34.8993288590604, Blast_Score=88, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6226542, Length=292, Percent_Identity=27.7397260273973, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32921; Mature: 32790
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKPETYYVPAQSSWPIVGAFALFLVAVGAGMTVQGTQSDGAVGTLGGIILAVGMLFLL CCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH YMLAGWFSNVITESLTGKYSAQITRSFRQGMSWFIFSEVMFFGAFFGALFYARMISVPWL HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGADNNFMTHEVLWPSFEAIWPLTTTPGGETTQAMPWQGIPLTNTILLLLSSITLHMAHI CCCCCCCEEHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLEQDKRTALIVWLEITIVLAGFFLYYQAVEYAHAYQDIGLTLQSGIYGNTFFMLTGFHG HHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH LHVCLGTIFLIVLLFRIAKEHFSPKNHFAFQAGSWYWHFVDVVWLCLFVFVYVL HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SNKPETYYVPAQSSWPIVGAFALFLVAVGAGMTVQGTQSDGAVGTLGGIILAVGMLFLL CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH YMLAGWFSNVITESLTGKYSAQITRSFRQGMSWFIFSEVMFFGAFFGALFYARMISVPWL HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGADNNFMTHEVLWPSFEAIWPLTTTPGGETTQAMPWQGIPLTNTILLLLSSITLHMAHI CCCCCCCEEHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLEQDKRTALIVWLEITIVLAGFFLYYQAVEYAHAYQDIGLTLQSGIYGNTFFMLTGFHG HHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH LHVCLGTIFLIVLLFRIAKEHFSPKNHFAFQAGSWYWHFVDVVWLCLFVFVYVL HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]