Click here to switch to the map view.

The map label for this gene is chiA [H]

Identifier: 156977467

GI number: 156977467

Start: 1433293

End: 1434588

Strand: Reverse

Name: chiA [H]

Synonym: VIBHAR_06254

Alternate gene names: 156977467

Gene position: 1434588-1433293 (Counterclockwise)

Preceding gene: 156977468

Following gene: 156977464

Centisome position: 65.09

GC content: 45.83

Gene sequence:

>1296_bases
ATGAAAAAGACACTTCTCGCAGCTGCATTATTTACGGGGCTTACAGGTATTGCACAAGCTGAGCAAAAAGTCGTGGCAGG
CTATTTTGCCGATTGGCAGTACGCAAATGCAGACAATCCATACAAGGTTAAAGACATTCCGGCTGATAACCTGACTCACA
TTATCTACGCATTTTTAAGTATGTGTGTTCCTCACACTGGTGCTTCGGAAAATATTCAAAAGCTGGTTGCAAAGCACTGT
GAAGGCAAAGAACCGTATACGGCGATTTTGGTTGATACCGAGGCGGCACTTGAAAAAGACTTTGGTCCGGTCTCTGTAGA
CGTTCCATATAAAGGGCACTTCGCCCAATTGGCCGAACTTAAGAAGCAACATCCTGATCTAAAAATTCTTCCTTCTTTTG
GCGGTTGGACCATGTCTGAACCTTTCCACGCTATGGCTAAAAACCAGCAAGCAATGGATCAGTTCTCGAAAACGGCGGTC
GAGTTGATTGCAAAGTACGATTTTTTTGATGGCATTGACTTGGACTGGGAATATCCAGGTGGTGGCGGTTTGACTACGTC
TCCTTGGAGTCCAGATACCAAGCTGACGGATGAGCAAAAAGCATTAGAGCGTGATGCCTTCACTTACCTAGTTAAAACCA
TGCGTGGTGATCTAGATACACTAGCGAAAAAGACCAAGCGTGAGTACGAGCTTTCAACAGCGGTGGGTGTTGGTCCTAAA
GCAGCAGGTATTGACTGGAAAGCGGCGCAGCCTTACCTAACCAACATGTTTGCGATGACATACGACTTCCTTGGCGGTTG
GGGGCAACAGACAGGGCATACGACTAACCTACATGCGACCGACCGCAGTTGGTGGGGAATGGGCGCAGACGTGTTCATTA
ATCAAATGATTGAGCTGGGTATTCCTAGTGAGAAGTTGGTGATTGGTGCCGCGTTTTATGGTCGTGGTTGGCAAGGAACT
AAAGATTTTGCCGGTGGTTTACCAACTCAAGACTTATTATCGGAGAAAGGCGCACAGTTTGGTACTGGTGAGAATGGCTA
CTTCATGTTCTGGGATCTGATGAAGAACTACAGTGTGAAACAAGGATATGAGTACAAATATGATGAGCAAGCTCAAGCGC
CATACTTATGGAACCCAGACAAGAAGGTGTTTATCTCATTTGAAGATCAGCGATCTATCAAAGCCAAAGCAGACTGGGCG
AAACAATCTAACTTAGGCGGAATCTTTACATGGGAACTGTCAGGAGATCCGAAAGGAGAGTTAGTCGAAGTGATGTATAA
GGAAATGCAGAACTAG

Upstream 100 bases:

>100_bases
CAGGCTGCGAGGATTTATAAATGACTCGCAGCCTGATTTCGTTTCCAAGTTAAAAATAATCCTCAGGGGTAATTTGTAGT
TGATTACTCTGGAGGAAATT

Downstream 100 bases:

>100_bases
TCTCTGTCCCTTACGTTATAACTACGTAAATCAAGCCGTCGTTATTGTTCGACGGCTTTTTCGTTGTGGTTCTCTTCGGC
AAAGCTAATCAACTGCTCAA

Product: chitinase

Products: NA

Alternate protein names: CHI-A [H]

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKKTLLAAALFTGLTGIAQAEQKVVAGYFADWQYANADNPYKVKDIPADNLTHIIYAFLSMCVPHTGASENIQKLVAKHC
EGKEPYTAILVDTEAALEKDFGPVSVDVPYKGHFAQLAELKKQHPDLKILPSFGGWTMSEPFHAMAKNQQAMDQFSKTAV
ELIAKYDFFDGIDLDWEYPGGGGLTTSPWSPDTKLTDEQKALERDAFTYLVKTMRGDLDTLAKKTKREYELSTAVGVGPK
AAGIDWKAAQPYLTNMFAMTYDFLGGWGQQTGHTTNLHATDRSWWGMGADVFINQMIELGIPSEKLVIGAAFYGRGWQGT
KDFAGGLPTQDLLSEKGAQFGTGENGYFMFWDLMKNYSVKQGYEYKYDEQAQAPYLWNPDKKVFISFEDQRSIKAKADWA
KQSNLGGIFTWELSGDPKGELVEVMYKEMQN

Sequences:

>Translated_431_residues
MKKTLLAAALFTGLTGIAQAEQKVVAGYFADWQYANADNPYKVKDIPADNLTHIIYAFLSMCVPHTGASENIQKLVAKHC
EGKEPYTAILVDTEAALEKDFGPVSVDVPYKGHFAQLAELKKQHPDLKILPSFGGWTMSEPFHAMAKNQQAMDQFSKTAV
ELIAKYDFFDGIDLDWEYPGGGGLTTSPWSPDTKLTDEQKALERDAFTYLVKTMRGDLDTLAKKTKREYELSTAVGVGPK
AAGIDWKAAQPYLTNMFAMTYDFLGGWGQQTGHTTNLHATDRSWWGMGADVFINQMIELGIPSEKLVIGAAFYGRGWQGT
KDFAGGLPTQDLLSEKGAQFGTGENGYFMFWDLMKNYSVKQGYEYKYDEQAQAPYLWNPDKKVFISFEDQRSIKAKADWA
KQSNLGGIFTWELSGDPKGELVEVMYKEMQN
>Mature_431_residues
MKKTLLAAALFTGLTGIAQAEQKVVAGYFADWQYANADNPYKVKDIPADNLTHIIYAFLSMCVPHTGASENIQKLVAKHC
EGKEPYTAILVDTEAALEKDFGPVSVDVPYKGHFAQLAELKKQHPDLKILPSFGGWTMSEPFHAMAKNQQAMDQFSKTAV
ELIAKYDFFDGIDLDWEYPGGGGLTTSPWSPDTKLTDEQKALERDAFTYLVKTMRGDLDTLAKKTKREYELSTAVGVGPK
AAGIDWKAAQPYLTNMFAMTYDFLGGWGQQTGHTTNLHATDRSWWGMGADVFINQMIELGIPSEKLVIGAAFYGRGWQGT
KDFAGGLPTQDLLSEKGAQFGTGENGYFMFWDLMKNYSVKQGYEYKYDEQAQAPYLWNPDKKVFISFEDQRSIKAKADWA
KQSNLGGIFTWELSGDPKGELVEVMYKEMQN

Specific function: Unknown

COG id: COG3325

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily [H]

Homologues:

Organism=Homo sapiens, GI4502809, Length=422, Percent_Identity=26.7772511848341, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI133893286, Length=304, Percent_Identity=26.6447368421053, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI144226251, Length=313, Percent_Identity=27.1565495207668, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI42542398, Length=278, Percent_Identity=25.1798561151079, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI58386720, Length=407, Percent_Identity=24.0786240786241, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI68533255, Length=361, Percent_Identity=23.5457063711911, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI68533253, Length=361, Percent_Identity=23.5457063711911, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI68533260, Length=317, Percent_Identity=24.2902208201893, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551250, Length=316, Percent_Identity=29.746835443038, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI71995504, Length=436, Percent_Identity=23.6238532110092, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17559362, Length=405, Percent_Identity=25.4320987654321, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17563680, Length=419, Percent_Identity=24.1050119331742, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17531695, Length=405, Percent_Identity=22.7160493827161, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI72000004, Length=326, Percent_Identity=23.9263803680982, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17535565, Length=305, Percent_Identity=22.6229508196721, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320579, Length=432, Percent_Identity=27.0833333333333, Blast_Score=123, Evalue=7e-29,
Organism=Drosophila melanogaster, GI221330815, Length=419, Percent_Identity=29.3556085918854, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI21358195, Length=435, Percent_Identity=23.448275862069, Blast_Score=118, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24655584, Length=408, Percent_Identity=25.4901960784314, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI45550474, Length=427, Percent_Identity=26.2295081967213, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI22024049, Length=415, Percent_Identity=27.710843373494, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI116007452, Length=399, Percent_Identity=25.8145363408521, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28573679, Length=410, Percent_Identity=26.0975609756098, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI221329807, Length=323, Percent_Identity=25.3869969040248, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI161077700, Length=323, Percent_Identity=25.3869969040248, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002126
- InterPro:   IPR003610
- InterPro:   IPR011583
- InterPro:   IPR013540
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR022409 [H]

Pfam domain/function: PF02839 CBM_5_12; PF08329 ChitinaseA_N; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 48134; Mature: 48134

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLAAALFTGLTGIAQAEQKVVAGYFADWQYANADNPYKVKDIPADNLTHIIYAFLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCHHHHHHHHHHH
MCVPHTGASENIQKLVAKHCEGKEPYTAILVDTEAALEKDFGPVSVDVPYKGHFAQLAEL
HHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCEEEECCCCCHHHHHHHH
KKQHPDLKILPSFGGWTMSEPFHAMAKNQQAMDQFSKTAVELIAKYDFFDGIDLDWEYPG
HHHCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
GGGLTTSPWSPDTKLTDEQKALERDAFTYLVKTMRGDLDTLAKKTKREYELSTAVGVGPK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
AAGIDWKAAQPYLTNMFAMTYDFLGGWGQQTGHTTNLHATDRSWWGMGADVFINQMIELG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHC
IPSEKLVIGAAFYGRGWQGTKDFAGGLPTQDLLSEKGAQFGTGENGYFMFWDLMKNYSVK
CCCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHCCCCC
QGYEYKYDEQAQAPYLWNPDKKVFISFEDQRSIKAKADWAKQSNLGGIFTWELSGDPKGE
CCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHH
LVEVMYKEMQN
HHHHHHHHHCC
>Mature Secondary Structure
MKKTLLAAALFTGLTGIAQAEQKVVAGYFADWQYANADNPYKVKDIPADNLTHIIYAFLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCHHHHHHHHHHH
MCVPHTGASENIQKLVAKHCEGKEPYTAILVDTEAALEKDFGPVSVDVPYKGHFAQLAEL
HHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCEEEECCCCCHHHHHHHH
KKQHPDLKILPSFGGWTMSEPFHAMAKNQQAMDQFSKTAVELIAKYDFFDGIDLDWEYPG
HHHCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
GGGLTTSPWSPDTKLTDEQKALERDAFTYLVKTMRGDLDTLAKKTKREYELSTAVGVGPK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
AAGIDWKAAQPYLTNMFAMTYDFLGGWGQQTGHTTNLHATDRSWWGMGADVFINQMIELG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHC
IPSEKLVIGAAFYGRGWQGTKDFAGGLPTQDLLSEKGAQFGTGENGYFMFWDLMKNYSVK
CCCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHCCCCC
QGYEYKYDEQAQAPYLWNPDKKVFISFEDQRSIKAKADWAKQSNLGGIFTWELSGDPKGE
CCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHH
LVEVMYKEMQN
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8416892; 1464065; 7764022 [H]