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The map label for this gene is ydhF [H]

Identifier: 156977443

GI number: 156977443

Start: 1410749

End: 1411657

Strand: Reverse

Name: ydhF [H]

Synonym: VIBHAR_06230

Alternate gene names: 156977443

Gene position: 1411657-1410749 (Counterclockwise)

Preceding gene: 156977445

Following gene: 156977442

Centisome position: 64.05

GC content: 45.98

Gene sequence:

>909_bases
ATGGTTGCAAAAGTAGTGACTGCACCAAACGGTCCAGAGTTTTCTGAGCTGGTTCAAGGATATTGGCGTGCAGTAGATTG
GGGCATGACAGCGCAAGAGCGTTTGTCGTTCCTAAAGCAACACATTGAGTTAGGTATTACCACCGTTGATCACGCTGACA
TTTACGGTAATTACGAGTGTGAAGCGTTGTTTGGTGAAGCATTAGCACTAGACAAGAGCATTCGTGAGCAAATTCAGATC
GTGACAAAGTGCGACATCAATTTATGTGGTGACAAAACGCCAGAGCGTAAGATTAACCACTATGACACCAGCGCTGCACA
CATCTATCAATCCGTGAACAACTCGCTTGAGAGACTCAAAGTCGACGAGATTGACGTTCTACTGATTCACCGTCCAGACG
TGTTGATGGACGCAGATGAGGTTGCAGAAGCGTTCTCTGAGCTACATAAAGTGGGTAAAGTTAAGCACTTTGGTGTTTCT
AACTTCACGCCGCGTCAATTCGAACTTCTTCAATCTCGTTTAAGCAAACCTCTTGTGACTAACCAAGTGGAAATCAACCC
ACTGAACTTTGAAGTGGCACACGATGGTACGTTAGACCTACTTCAAACACATCGTGTTCGTCCAATGGCATGGTCATGTT
TGGGCGGTGGTTCCATTTTCACTGGTGATACGGAGCAAGCGGTTCGTGTTCGTAACGAACTGGAAGCTATTCGAGAAGAA
GTGGGTGCAAACAGCATTGATGAAGTCATTTACGCTTGGGTTCGTCGCTTACCTTCTAAACCAATGCCAATTATCGGTTC
TGGTAAAATTGAGCGCGTTCACGCAGCAGTGAATGCTTTGAACATTGAACTCACTCGTGAGCAATGGTACCGAGTTTGGG
TAGCATCAAAAGGTCACGGTGTGCCATAG

Upstream 100 bases:

>100_bases
ACATATTTCGTACTCCAGTTCGAATTGCGAAAGTTTACCCGTTGAGCAAGCGGTAAAACAAGACTAGGATGAATGCAGAT
TAAGAAAAGGAGAGAAACAC

Downstream 100 bases:

>100_bases
AAAGCACAATAATCTAACGAAAAATAAGGCGCTCTCATCGGGTGCCTTTTTTATTTGCTATTCAGCTGAAAGATCTGGGG
CCGATAAAGGCAACCCCTTG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MVAKVVTAPNGPEFSELVQGYWRAVDWGMTAQERLSFLKQHIELGITTVDHADIYGNYECEALFGEALALDKSIREQIQI
VTKCDINLCGDKTPERKINHYDTSAAHIYQSVNNSLERLKVDEIDVLLIHRPDVLMDADEVAEAFSELHKVGKVKHFGVS
NFTPRQFELLQSRLSKPLVTNQVEINPLNFEVAHDGTLDLLQTHRVRPMAWSCLGGGSIFTGDTEQAVRVRNELEAIREE
VGANSIDEVIYAWVRRLPSKPMPIIGSGKIERVHAAVNALNIELTREQWYRVWVASKGHGVP

Sequences:

>Translated_302_residues
MVAKVVTAPNGPEFSELVQGYWRAVDWGMTAQERLSFLKQHIELGITTVDHADIYGNYECEALFGEALALDKSIREQIQI
VTKCDINLCGDKTPERKINHYDTSAAHIYQSVNNSLERLKVDEIDVLLIHRPDVLMDADEVAEAFSELHKVGKVKHFGVS
NFTPRQFELLQSRLSKPLVTNQVEINPLNFEVAHDGTLDLLQTHRVRPMAWSCLGGGSIFTGDTEQAVRVRNELEAIREE
VGANSIDEVIYAWVRRLPSKPMPIIGSGKIERVHAAVNALNIELTREQWYRVWVASKGHGVP
>Mature_302_residues
MVAKVVTAPNGPEFSELVQGYWRAVDWGMTAQERLSFLKQHIELGITTVDHADIYGNYECEALFGEALALDKSIREQIQI
VTKCDINLCGDKTPERKINHYDTSAAHIYQSVNNSLERLKVDEIDVLLIHRPDVLMDADEVAEAFSELHKVGKVKHFGVS
NFTPRQFELLQSRLSKPLVTNQVEINPLNFEVAHDGTLDLLQTHRVRPMAWSCLGGGSIFTGDTEQAVRVRNELEAIREE
VGANSIDEVIYAWVRRLPSKPMPIIGSGKIERVHAAVNALNIELTREQWYRVWVASKGHGVP

Specific function: May function as oxidoreductase (Potential) [H]

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI48994888, Length=302, Percent_Identity=57.9470198675497, Blast_Score=363, Evalue=1e-102,
Organism=Escherichia coli, GI87081735, Length=299, Percent_Identity=27.7591973244147, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789375, Length=306, Percent_Identity=22.8758169934641, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786400, Length=150, Percent_Identity=32, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788081, Length=273, Percent_Identity=27.1062271062271, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323998, Length=325, Percent_Identity=28.9230769230769, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6319958, Length=290, Percent_Identity=27.9310344827586, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322615, Length=247, Percent_Identity=28.7449392712551, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6319951, Length=287, Percent_Identity=27.1777003484321, Blast_Score=75, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6320079, Length=252, Percent_Identity=27.3809523809524, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34005; Mature: 34005

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKVVTAPNGPEFSELVQGYWRAVDWGMTAQERLSFLKQHIELGITTVDHADIYGNYEC
CCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCH
EALFGEALALDKSIREQIQIVTKCDINLCGDKTPERKINHYDTSAAHIYQSVNNSLERLK
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCC
VDEIDVLLIHRPDVLMDADEVAEAFSELHKVGKVKHFGVSNFTPRQFELLQSRLSKPLVT
CCCEEEEEEECCCCEECHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCC
NQVEINPLNFEVAHDGTLDLLQTHRVRPMAWSCLGGGSIFTGDTEQAVRVRNELEAIREE
CEEEECCCEEEEECCCCHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHH
VGANSIDEVIYAWVRRLPSKPMPIIGSGKIERVHAAVNALNIELTREQWYRVWVASKGHG
HCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHEEEEEHHHEEEEEEECCCCC
VP
CC
>Mature Secondary Structure
MVAKVVTAPNGPEFSELVQGYWRAVDWGMTAQERLSFLKQHIELGITTVDHADIYGNYEC
CCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCH
EALFGEALALDKSIREQIQIVTKCDINLCGDKTPERKINHYDTSAAHIYQSVNNSLERLK
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCC
VDEIDVLLIHRPDVLMDADEVAEAFSELHKVGKVKHFGVSNFTPRQFELLQSRLSKPLVT
CCCEEEEEEECCCCEECHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCC
NQVEINPLNFEVAHDGTLDLLQTHRVRPMAWSCLGGGSIFTGDTEQAVRVRNELEAIREE
CEEEECCCEEEEECCCCHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHH
VGANSIDEVIYAWVRRLPSKPMPIIGSGKIERVHAAVNALNIELTREQWYRVWVASKGHG
HCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHEEEEEHHHEEEEEEECCCCC
VP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]