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The map label for this gene is 156977432

Identifier: 156977432

GI number: 156977432

Start: 1401861

End: 1402862

Strand: Reverse

Name: 156977432

Synonym: VIBHAR_06219

Alternate gene names: NA

Gene position: 1402862-1401861 (Counterclockwise)

Preceding gene: 156977433

Following gene: 156977431

Centisome position: 63.65

GC content: 41.42

Gene sequence:

>1002_bases
TTGTGGGGAGCCCTCAGGGTTTGGCCTTGTTATGGTCTCCCAGAGCATTTAATAGTCGACAATGGTGCTGAGTTTAACAG
TCTTGACTTCAAAATCGCGTGCAAAGAGCTGAAAATCAAGGTGAAGAAAAATCCAACTAAAAAGCCTTGGCTTAAGGGTT
CAGTAGAGCGTTACTTTCGCACAATCAATAATCGACTATTGTCTCGGATACCTGGAAAGAGTTTTACTAACATATTCGAA
AGGAAAGACTACGACCCGCTTAAAAATGCCGTAATCGACAGTTTACTTCTTCAAGAAATGATTCATATTTGGATAGTTGA
TATGTATCAAAACGGGAAGAATGGTCTTGAAAACAACATCCCGAATCTGAGTTGGGTTGACGCTGTCAATTCTTCAATCC
CTCCACGTCCTTTCAAAGGCTCCAGAGAGGAACTGAAGTTTAACTTGGGGAAAAACCGCGAGGTAGCTCTCGATAGAAAT
GGGGTTAGGCTTGGTACAACAGTACGCTACTCTAGTGATCGTCTAGCAAAATATTTTGGAGAAGCAACTTGTAAAGACAT
GAAAGGCGTACGAGTAAGAATCAAGTATGATCCTAGCTGTCTTGGTAGGGTGTATGTACTTGATGAAAAGAAAGAAGAGT
TTTTTGCCGTAGAGGCAATTGATGCTGACTACGCCTATTCTGTTTCTGAGTGGTTACACAAGACTTGTTGTAACTATGCA
AGACGATATATTCGAAAGAACTACAATCACAGAGATGTCGTTGAAGCTTGGCGAAAAATACTCGAAATCATTGATAAGGC
ATTTGATAAAACTGGTCAGAACCAGACGCGAAACTCATTAGGTACCATAACTACATCTCGGGTGCAGCGCGTGAAAGAGC
ACACTGAAAGAGCATCTTCCGTCGCGAAAACACAACAGCAAGATAAAAGCATCAAGTCGGAACTTGATGATGAGTTCGAT
TGGGATATTGAAGTCAATACTAAGGGTTGGTCAATAGAGTGA

Upstream 100 bases:

>100_bases
TGAGACTCGTCGGGTCATATCTTTTCAATTGATGCTATGATCGCCGATCAAAATGAATCTGCCTACTTTTCACGCTATCT
ACATGATTCTTCTATGCTAG

Downstream 100 bases:

>100_bases
ATTGTTATCGAGGTAATTGACATGGAATGTCAAAAAGTTGAAATAACTGCTAATAAAGTTAAACAGATCTTTATTCAAAA
CCCTCAAATTACCTACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; TniA Transposase; Plasmid Replication Initiator Protein-Like Protein; Transposase OrfA; Integrase; Transposase-Like Mu; Integrase Catalytic Domain; Integrase/Transposase

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MWGALRVWPCYGLPEHLIVDNGAEFNSLDFKIACKELKIKVKKNPTKKPWLKGSVERYFRTINNRLLSRIPGKSFTNIFE
RKDYDPLKNAVIDSLLLQEMIHIWIVDMYQNGKNGLENNIPNLSWVDAVNSSIPPRPFKGSREELKFNLGKNREVALDRN
GVRLGTTVRYSSDRLAKYFGEATCKDMKGVRVRIKYDPSCLGRVYVLDEKKEEFFAVEAIDADYAYSVSEWLHKTCCNYA
RRYIRKNYNHRDVVEAWRKILEIIDKAFDKTGQNQTRNSLGTITTSRVQRVKEHTERASSVAKTQQQDKSIKSELDDEFD
WDIEVNTKGWSIE

Sequences:

>Translated_333_residues
MWGALRVWPCYGLPEHLIVDNGAEFNSLDFKIACKELKIKVKKNPTKKPWLKGSVERYFRTINNRLLSRIPGKSFTNIFE
RKDYDPLKNAVIDSLLLQEMIHIWIVDMYQNGKNGLENNIPNLSWVDAVNSSIPPRPFKGSREELKFNLGKNREVALDRN
GVRLGTTVRYSSDRLAKYFGEATCKDMKGVRVRIKYDPSCLGRVYVLDEKKEEFFAVEAIDADYAYSVSEWLHKTCCNYA
RRYIRKNYNHRDVVEAWRKILEIIDKAFDKTGQNQTRNSLGTITTSRVQRVKEHTERASSVAKTQQQDKSIKSELDDEFD
WDIEVNTKGWSIE
>Mature_333_residues
MWGALRVWPCYGLPEHLIVDNGAEFNSLDFKIACKELKIKVKKNPTKKPWLKGSVERYFRTINNRLLSRIPGKSFTNIFE
RKDYDPLKNAVIDSLLLQEMIHIWIVDMYQNGKNGLENNIPNLSWVDAVNSSIPPRPFKGSREELKFNLGKNREVALDRN
GVRLGTTVRYSSDRLAKYFGEATCKDMKGVRVRIKYDPSCLGRVYVLDEKKEEFFAVEAIDADYAYSVSEWLHKTCCNYA
RRYIRKNYNHRDVVEAWRKILEIIDKAFDKTGQNQTRNSLGTITTSRVQRVKEHTERASSVAKTQQQDKSIKSELDDEFD
WDIEVNTKGWSIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38774; Mature: 38774

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGALRVWPCYGLPEHLIVDNGAEFNSLDFKIACKELKIKVKKNPTKKPWLKGSVERYFR
CCCCEEEEECCCCCCCEEECCCCCCCCCCCEEEEEHHEEEECCCCCCCCCCCHHHHHHHH
TINNRLLSRIPGKSFTNIFERKDYDPLKNAVIDSLLLQEMIHIWIVDMYQNGKNGLENNI
HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
PNLSWVDAVNSSIPPRPFKGSREELKFNLGKNREVALDRNGVRLGTTVRYSSDRLAKYFG
CCCHHHHHHCCCCCCCCCCCCHHHHEEECCCCCEEEECCCCEEECEEEEECHHHHHHHHH
EATCKDMKGVRVRIKYDPSCLGRVYVLDEKKEEFFAVEAIDADYAYSVSEWLHKTCCNYA
HHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
RRYIRKNYNHRDVVEAWRKILEIIDKAFDKTGQNQTRNSLGTITTSRVQRVKEHTERASS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAKTQQQDKSIKSELDDEFDWDIEVNTKGWSIE
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MWGALRVWPCYGLPEHLIVDNGAEFNSLDFKIACKELKIKVKKNPTKKPWLKGSVERYFR
CCCCEEEEECCCCCCCEEECCCCCCCCCCCEEEEEHHEEEECCCCCCCCCCCHHHHHHHH
TINNRLLSRIPGKSFTNIFERKDYDPLKNAVIDSLLLQEMIHIWIVDMYQNGKNGLENNI
HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
PNLSWVDAVNSSIPPRPFKGSREELKFNLGKNREVALDRNGVRLGTTVRYSSDRLAKYFG
CCCHHHHHHCCCCCCCCCCCCHHHHEEECCCCCEEEECCCCEEECEEEEECHHHHHHHHH
EATCKDMKGVRVRIKYDPSCLGRVYVLDEKKEEFFAVEAIDADYAYSVSEWLHKTCCNYA
HHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
RRYIRKNYNHRDVVEAWRKILEIIDKAFDKTGQNQTRNSLGTITTSRVQRVKEHTERASS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAKTQQQDKSIKSELDDEFDWDIEVNTKGWSIE
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA