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The map label for this gene is yejH [C]

Identifier: 156977430

GI number: 156977430

Start: 1399374

End: 1400768

Strand: Direct

Name: yejH [C]

Synonym: VIBHAR_06217

Alternate gene names: 156977430

Gene position: 1399374-1400768 (Clockwise)

Preceding gene: 156977429

Following gene: 156977434

Centisome position: 63.49

GC content: 44.01

Gene sequence:

>1395_bases
GTGTTAAGAAAATGGCAAGCCGAGTGCATATCATTAGCCCTATCGAAGTATAGGCGTGGACACGCACACTTTCTTGCTCA
GGCTACACCTGGTGCAGGTAAGACAATTATGGCAGCGACTTTAGCAAAACAAATGTTCGACTCAAGGGAAATCGACTTCG
TGCTGTGTTTTTCCCCCTCAAAGGCTGTCGCAGATGGGATAAAATCAACTTTTTCACAACTACTAGAATGTTCATTCAAT
GGCGCGCTCGGTGAAACAGGCTGCTCTGTGACTTACCAATCGCTTCGGTTCGTGACCAAACGCTTTTGGGATACCCTTTC
AAAATACAAAGTGCTTTGTATATTTGATGAAATCCATCATTGTGGCGGAGATAATGAGCTCAACAGTAACTCATGGGGTT
ACCAGTTATTAAGTGACGTACAACATGCTGCAACTTTCACTCTCGCACTAACTGGCACACCATGGCGTTCTGATAAAACA
CCAATTACGTTAGCATCCTACACAGACCCCGAAGGAAAAATCGTATGTGATTATCAGTATTCGCTTGCTCAAGCAGTTCA
AGATGGCGTTTGTCGTAAACCGAAAATAGCTCTGATTGATTGCGAGGAAGTAAAGGTTACCGAGAGCGAAGGTCTACGTT
CATATAACACCATCGATGAACTGTTAAATGAAGGCGATGTAACATATGCTCTAATACTCAAAGACCAACAAGCGCTTCTT
CACCTAATCGGGGAAGCAGTTAGCAGGCTCATTAGTATTCAGGCAGAAAGCCCAAACGCCGGTGGACTCATTGTGGCGTC
TTCAATCCAAGAAGCTAACAAAATAGCCAGTATCTTAACTCATAGTTACGCGCAATCTTCGGTAGTCGTTAGCTACAGGG
ATACAAGTTCTCACGAAAAGATAAAGGAGTTCAAAGAGACCCATTCTAAGAACTGGATAGTTAGCGTTGGCATGGTCAGC
GAAGGAACCGACATTCCTAGGCTGCAGGTCTGTTGTTACTTAACTAAGATTAAAACAGAGCTCTATTTTCGCCAAGTGCT
CGGTCGTATCCTCCGTGTCACAGAGTCACCTAATCAAGAAGCTTGGTTATACACCTTCGCCGAGTCGAACATGATTAGAT
GTGCAGAAGAAATTGAGACTGACATTCCGGATACCTGTTTGTACCTAAACTACGAATGTCCAGACTCACAACGGTCTCGC
GTGGATGAATCAAACAAAACGCAAGCTTTAGATGCTCAGCTTTTGCCAGCATCGGTAGCAGAGATTTCATTTAACTGGAA
TGATGACTTGTCTGCCTCTGAGCCACCTAATGGCAAAAACTCCGATTTATTTGAGTCAAGTATTCAACTGGCAAGGTTCA
ATCAAAGAGTCATTGAAGCTTTTCGGGGGGTGTAG

Upstream 100 bases:

>100_bases
CATCCCACTTAGATGCCGTCAATAAAGCTGCAGTATTGGTCGCGAAACTAAATGTCTGGACAGACGCTATAAAGCTTGTA
ACTAAGCAAGATGTAAAGTC

Downstream 100 bases:

>100_bases
CCGTGCTGGAAGTGCACTGGAGTAATGCTACTAAGGTGAGTCTAGTTATTCACTGACTCGGATGACAGGTAGGTAAGGAA
AAAAAGCATTTCAAAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLRKWQAECISLALSKYRRGHAHFLAQATPGAGKTIMAATLAKQMFDSREIDFVLCFSPSKAVADGIKSTFSQLLECSFN
GALGETGCSVTYQSLRFVTKRFWDTLSKYKVLCIFDEIHHCGGDNELNSNSWGYQLLSDVQHAATFTLALTGTPWRSDKT
PITLASYTDPEGKIVCDYQYSLAQAVQDGVCRKPKIALIDCEEVKVTESEGLRSYNTIDELLNEGDVTYALILKDQQALL
HLIGEAVSRLISIQAESPNAGGLIVASSIQEANKIASILTHSYAQSSVVVSYRDTSSHEKIKEFKETHSKNWIVSVGMVS
EGTDIPRLQVCCYLTKIKTELYFRQVLGRILRVTESPNQEAWLYTFAESNMIRCAEEIETDIPDTCLYLNYECPDSQRSR
VDESNKTQALDAQLLPASVAEISFNWNDDLSASEPPNGKNSDLFESSIQLARFNQRVIEAFRGV

Sequences:

>Translated_464_residues
MLRKWQAECISLALSKYRRGHAHFLAQATPGAGKTIMAATLAKQMFDSREIDFVLCFSPSKAVADGIKSTFSQLLECSFN
GALGETGCSVTYQSLRFVTKRFWDTLSKYKVLCIFDEIHHCGGDNELNSNSWGYQLLSDVQHAATFTLALTGTPWRSDKT
PITLASYTDPEGKIVCDYQYSLAQAVQDGVCRKPKIALIDCEEVKVTESEGLRSYNTIDELLNEGDVTYALILKDQQALL
HLIGEAVSRLISIQAESPNAGGLIVASSIQEANKIASILTHSYAQSSVVVSYRDTSSHEKIKEFKETHSKNWIVSVGMVS
EGTDIPRLQVCCYLTKIKTELYFRQVLGRILRVTESPNQEAWLYTFAESNMIRCAEEIETDIPDTCLYLNYECPDSQRSR
VDESNKTQALDAQLLPASVAEISFNWNDDLSASEPPNGKNSDLFESSIQLARFNQRVIEAFRGV
>Mature_464_residues
MLRKWQAECISLALSKYRRGHAHFLAQATPGAGKTIMAATLAKQMFDSREIDFVLCFSPSKAVADGIKSTFSQLLECSFN
GALGETGCSVTYQSLRFVTKRFWDTLSKYKVLCIFDEIHHCGGDNELNSNSWGYQLLSDVQHAATFTLALTGTPWRSDKT
PITLASYTDPEGKIVCDYQYSLAQAVQDGVCRKPKIALIDCEEVKVTESEGLRSYNTIDELLNEGDVTYALILKDQQALL
HLIGEAVSRLISIQAESPNAGGLIVASSIQEANKIASILTHSYAQSSVVVSYRDTSSHEKIKEFKETHSKNWIVSVGMVS
EGTDIPRLQVCCYLTKIKTELYFRQVLGRILRVTESPNQEAWLYTFAESNMIRCAEEIETDIPDTCLYLNYECPDSQRSR
VDESNKTQALDAQLLPASVAEISFNWNDDLSASEPPNGKNSDLFESSIQLARFNQRVIEAFRGV

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2917 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 51738; Mature: 51738

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKWQAECISLALSKYRRGHAHFLAQATPGAGKTIMAATLAKQMFDSREIDFVLCFSPS
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
KAVADGIKSTFSQLLECSFNGALGETGCSVTYQSLRFVTKRFWDTLSKYKVLCIFDEIHH
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHH
CGGDNELNSNSWGYQLLSDVQHAATFTLALTGTPWRSDKTPITLASYTDPEGKIVCDYQY
CCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEHH
SLAQAVQDGVCRKPKIALIDCEEVKVTESEGLRSYNTIDELLNEGDVTYALILKDQQALL
HHHHHHHHCCCCCCCEEEEECCCEEEEHHCCCCHHHHHHHHHCCCCEEEEEEECCHHHHH
HLIGEAVSRLISIQAESPNAGGLIVASSIQEANKIASILTHSYAQSSVVVSYRDTSSHEK
HHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH
IKEFKETHSKNWIVSVGMVSEGTDIPRLQVCCYLTKIKTELYFRQVLGRILRVTESPNQE
HHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWLYTFAESNMIRCAEEIETDIPDTCLYLNYECPDSQRSRVDESNKTQALDAQLLPASVA
EEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHCCCCHH
EISFNWNDDLSASEPPNGKNSDLFESSIQLARFNQRVIEAFRGV
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRKWQAECISLALSKYRRGHAHFLAQATPGAGKTIMAATLAKQMFDSREIDFVLCFSPS
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
KAVADGIKSTFSQLLECSFNGALGETGCSVTYQSLRFVTKRFWDTLSKYKVLCIFDEIHH
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHH
CGGDNELNSNSWGYQLLSDVQHAATFTLALTGTPWRSDKTPITLASYTDPEGKIVCDYQY
CCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEHH
SLAQAVQDGVCRKPKIALIDCEEVKVTESEGLRSYNTIDELLNEGDVTYALILKDQQALL
HHHHHHHHCCCCCCCEEEEECCCEEEEHHCCCCHHHHHHHHHCCCCEEEEEEECCHHHHH
HLIGEAVSRLISIQAESPNAGGLIVASSIQEANKIASILTHSYAQSSVVVSYRDTSSHEK
HHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH
IKEFKETHSKNWIVSVGMVSEGTDIPRLQVCCYLTKIKTELYFRQVLGRILRVTESPNQE
HHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWLYTFAESNMIRCAEEIETDIPDTCLYLNYECPDSQRSRVDESNKTQALDAQLLPASVA
EEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHCCCCHH
EISFNWNDDLSASEPPNGKNSDLFESSIQLARFNQRVIEAFRGV
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]