| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977425
Identifier: 156977425
GI number: 156977425
Start: 1394485
End: 1396407
Strand: Direct
Name: 156977425
Synonym: VIBHAR_06212
Alternate gene names: NA
Gene position: 1394485-1396407 (Clockwise)
Preceding gene: 156977424
Following gene: 156977426
Centisome position: 63.27
GC content: 42.95
Gene sequence:
>1923_bases ATGCAAACTCTGAAAGAGCTAATCGCATCCAATCCTGACGACTTAAAAGCAACTCTAAAGCGTGTATTTCGTCCTCTCAC ACCGCATATTGCGATCGATGGCAAAGAACTTGATGCACTAACGATATTAGTTAATTTAACCGATAAGACTGATGATCAGA AAGACCTGCTAGACCGAGCCAAATGCAAGCAAAAACTTCGAGATGAAAAATGGTGGGCTAGCTGCTTAAATGGTGTGAAC TATCGACAAAGCCATAACCCAAAATTTCCTGATATACGGTCTGAAGGCATTATTCGAACCGAAGCCCTAAGTGAGTTACC GAGCTTTCTACTCTCTTCTTCAAAAATCCCGCCATACCATTGGTCATACGCACATGATTCAAAATACGTAAATAAGAGCG CATTTCTCACTAATGAGTTTTGTTGGAATGGAGGGATATCATGCTTGGCTGAGCTTCTTAGAGATGTTGATCATCCACTT TGGAAAACATTAGCAAAATTAGGTTGCTATCAAAAAACTCGTAAAGCAATAGCAAAGCAGTTGGCGTCAATTGCTCACAT GACCATCAGTGTACCGCTCGCCCCGAATTACTTAACTCAAATATCGCTCCCCGATAGCAATACATCCTACATTTCACTCT CACCCGTTACATCTCTATCGATGCAGAGCCACTTTTATCAAGGGCTCCAAGATGAATATTTGCATACAGCGACGACGCGA TATAGCCGAAGCACTAATATGGGTGTCACTGCGATGACATGTGACGGTGCATTTAGAATGTTAAAGTCTAATACCAAGAT TTCCACCACCCCTCACCATCGACTAAACAGCAAACGCAGCTGGTTAACGTCAGAGCATGTCCAATCCTTAACAAAGTACC AACGCCTTAATAAACGATTAATGCCTGAAAATGCGCGAAAGGCACTCCGTAGAAAATGTAAAATTGAGGTTCTGAATTTG GTCAACGCTTGGTTGGCAATGCAAGACTGCACCCTGGATTCAACCATACTTGTTCAGCATCTGAATCATGACTTATCTTG CATAGGAGCCACCAAACGTTTTGCATACGATCCAGCGATGACCAAACTCTTTACTGAGCTTTTGAAACGAGCGTTATCAA ATTCAATCAATAATGGAACACAGCATACTAATGGCTCATATCTAGTCCTACCAAATATCAGGGTTTGTGGCGCAACGGCT TTAAGCTCTCCGGTAACGGTGGGGGTTCCGTCACTTACCGCTTTCTTTGGGTACGTTCACGCATTCGAACGCAAATTAAA TAGCATCTACACCGCGTTTCGTATCGAATCCTTTGCAATATGTATTCACCAACTCCATGTCGAAAAGCGCGGGTTAACAG CCGAGTTTGTGGCAAAAGGCAATGGGACTATATCAGCTCCCGCTACCCATGATGACTGGCAATGTGATGCAGTATTTAGT CTTATTTTGAACACTAATTTTGCTCAACGTATTGACCAAAAAACGTTAATTACAGCACTACCAAAGCGACTTGCTCGAGG TTCAGCAAAGATTGCGATAGACGATTTTAAATATCTAAACTCATTCACCACGATAGAGACGGCGATCCAATCTCTGCCAA TAAAGGTTGGAAGGTGGATATCGCTTCACACACAGCCAAACAACAACCTAGGTGATCTATTAGCTGCCATTAAAGAGGAC TCTCAGCTCATGGCAAGCTGTGTCGGTTATCATTTGTTAGAAGAGCCCAAAGATAAGCCGAACTCTCTCAGAGGTTACAA ACACGCTTTCGCTGAAAGCATTGTTGGGCTAATTAAGTCAATCACTTTTGGCTCCACGACCGATGCTAACACCATTTTGT GGTCGCTAAACAGCCATAAAAATTACCTAGTGGTACAGCCAAGGAGTATCAGCGATGAAACTACCCTCGAGTCTAGCCTA TGA
Upstream 100 bases:
>100_bases TACCGACTATTTATTTCATTTCGGCGATATTTTCTGTCTTTGGTTAGCTGAGTTCCAAACCGATGAGTTTAACCGTTCGT TCTATGTGTCGAGGTGGTAA
Downstream 100 bases:
>100_bases GCGCTCTATCGACCCATCAGATGTCTGCTTTTTTGTCGTTTGGCCCGACGATAAAAAAACTCCTTTAACTTATACATCTC GTACTTTGCTCGGACAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MQTLKELIASNPDDLKATLKRVFRPLTPHIAIDGKELDALTILVNLTDKTDDQKDLLDRAKCKQKLRDEKWWASCLNGVN YRQSHNPKFPDIRSEGIIRTEALSELPSFLLSSSKIPPYHWSYAHDSKYVNKSAFLTNEFCWNGGISCLAELLRDVDHPL WKTLAKLGCYQKTRKAIAKQLASIAHMTISVPLAPNYLTQISLPDSNTSYISLSPVTSLSMQSHFYQGLQDEYLHTATTR YSRSTNMGVTAMTCDGAFRMLKSNTKISTTPHHRLNSKRSWLTSEHVQSLTKYQRLNKRLMPENARKALRRKCKIEVLNL VNAWLAMQDCTLDSTILVQHLNHDLSCIGATKRFAYDPAMTKLFTELLKRALSNSINNGTQHTNGSYLVLPNIRVCGATA LSSPVTVGVPSLTAFFGYVHAFERKLNSIYTAFRIESFAICIHQLHVEKRGLTAEFVAKGNGTISAPATHDDWQCDAVFS LILNTNFAQRIDQKTLITALPKRLARGSAKIAIDDFKYLNSFTTIETAIQSLPIKVGRWISLHTQPNNNLGDLLAAIKED SQLMASCVGYHLLEEPKDKPNSLRGYKHAFAESIVGLIKSITFGSTTDANTILWSLNSHKNYLVVQPRSISDETTLESSL
Sequences:
>Translated_640_residues MQTLKELIASNPDDLKATLKRVFRPLTPHIAIDGKELDALTILVNLTDKTDDQKDLLDRAKCKQKLRDEKWWASCLNGVN YRQSHNPKFPDIRSEGIIRTEALSELPSFLLSSSKIPPYHWSYAHDSKYVNKSAFLTNEFCWNGGISCLAELLRDVDHPL WKTLAKLGCYQKTRKAIAKQLASIAHMTISVPLAPNYLTQISLPDSNTSYISLSPVTSLSMQSHFYQGLQDEYLHTATTR YSRSTNMGVTAMTCDGAFRMLKSNTKISTTPHHRLNSKRSWLTSEHVQSLTKYQRLNKRLMPENARKALRRKCKIEVLNL VNAWLAMQDCTLDSTILVQHLNHDLSCIGATKRFAYDPAMTKLFTELLKRALSNSINNGTQHTNGSYLVLPNIRVCGATA LSSPVTVGVPSLTAFFGYVHAFERKLNSIYTAFRIESFAICIHQLHVEKRGLTAEFVAKGNGTISAPATHDDWQCDAVFS LILNTNFAQRIDQKTLITALPKRLARGSAKIAIDDFKYLNSFTTIETAIQSLPIKVGRWISLHTQPNNNLGDLLAAIKED SQLMASCVGYHLLEEPKDKPNSLRGYKHAFAESIVGLIKSITFGSTTDANTILWSLNSHKNYLVVQPRSISDETTLESSL >Mature_640_residues MQTLKELIASNPDDLKATLKRVFRPLTPHIAIDGKELDALTILVNLTDKTDDQKDLLDRAKCKQKLRDEKWWASCLNGVN YRQSHNPKFPDIRSEGIIRTEALSELPSFLLSSSKIPPYHWSYAHDSKYVNKSAFLTNEFCWNGGISCLAELLRDVDHPL WKTLAKLGCYQKTRKAIAKQLASIAHMTISVPLAPNYLTQISLPDSNTSYISLSPVTSLSMQSHFYQGLQDEYLHTATTR YSRSTNMGVTAMTCDGAFRMLKSNTKISTTPHHRLNSKRSWLTSEHVQSLTKYQRLNKRLMPENARKALRRKCKIEVLNL VNAWLAMQDCTLDSTILVQHLNHDLSCIGATKRFAYDPAMTKLFTELLKRALSNSINNGTQHTNGSYLVLPNIRVCGATA LSSPVTVGVPSLTAFFGYVHAFERKLNSIYTAFRIESFAICIHQLHVEKRGLTAEFVAKGNGTISAPATHDDWQCDAVFS LILNTNFAQRIDQKTLITALPKRLARGSAKIAIDDFKYLNSFTTIETAIQSLPIKVGRWISLHTQPNNNLGDLLAAIKED SQLMASCVGYHLLEEPKDKPNSLRGYKHAFAESIVGLIKSITFGSTTDANTILWSLNSHKNYLVVQPRSISDETTLESSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71776; Mature: 71776
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLKELIASNPDDLKATLKRVFRPLTPHIAIDGKELDALTILVNLTDKTDDQKDLLDRA CCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHH KCKQKLRDEKWWASCLNGVNYRQSHNPKFPDIRSEGIIRTEALSELPSFLLSSSKIPPYH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC WSYAHDSKYVNKSAFLTNEFCWNGGISCLAELLRDVDHPLWKTLAKLGCYQKTRKAIAKQ CCCCCCCCCCCHHHHEEHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LASIAHMTISVPLAPNYLTQISLPDSNTSYISLSPVTSLSMQSHFYQGLQDEYLHTATTR HHHHHHHEEECCCCCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHH YSRSTNMGVTAMTCDGAFRMLKSNTKISTTPHHRLNSKRSWLTSEHVQSLTKYQRLNKRL HCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHC MPENARKALRRKCKIEVLNLVNAWLAMQDCTLDSTILVQHLNHDLSCIGATKRFAYDPAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCHHHHHCCHHH TKLFTELLKRALSNSINNGTQHTNGSYLVLPNIRVCGATALSSPVTVGVPSLTAFFGYVH HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCHHHCCCCEECCHHHHHHHHHHH AFERKLNSIYTAFRIESFAICIHQLHVEKRGLTAEFVAKGNGTISAPATHDDWQCDAVFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHHH LILNTNFAQRIDQKTLITALPKRLARGSAKIAIDDFKYLNSFTTIETAIQSLPIKVGRWI HHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEE SLHTQPNNNLGDLLAAIKEDSQLMASCVGYHLLEEPKDKPNSLRGYKHAFAESIVGLIKS EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ITFGSTTDANTILWSLNSHKNYLVVQPRSISDETTLESSL HCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCHHCCCC >Mature Secondary Structure MQTLKELIASNPDDLKATLKRVFRPLTPHIAIDGKELDALTILVNLTDKTDDQKDLLDRA CCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHH KCKQKLRDEKWWASCLNGVNYRQSHNPKFPDIRSEGIIRTEALSELPSFLLSSSKIPPYH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC WSYAHDSKYVNKSAFLTNEFCWNGGISCLAELLRDVDHPLWKTLAKLGCYQKTRKAIAKQ CCCCCCCCCCCHHHHEEHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LASIAHMTISVPLAPNYLTQISLPDSNTSYISLSPVTSLSMQSHFYQGLQDEYLHTATTR HHHHHHHEEECCCCCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHH YSRSTNMGVTAMTCDGAFRMLKSNTKISTTPHHRLNSKRSWLTSEHVQSLTKYQRLNKRL HCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHC MPENARKALRRKCKIEVLNLVNAWLAMQDCTLDSTILVQHLNHDLSCIGATKRFAYDPAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCHHHHHCCHHH TKLFTELLKRALSNSINNGTQHTNGSYLVLPNIRVCGATALSSPVTVGVPSLTAFFGYVH HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCHHHCCCCEECCHHHHHHHHHHH AFERKLNSIYTAFRIESFAICIHQLHVEKRGLTAEFVAKGNGTISAPATHDDWQCDAVFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHHH LILNTNFAQRIDQKTLITALPKRLARGSAKIAIDDFKYLNSFTTIETAIQSLPIKVGRWI HHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEE SLHTQPNNNLGDLLAAIKEDSQLMASCVGYHLLEEPKDKPNSLRGYKHAFAESIVGLIKS EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ITFGSTTDANTILWSLNSHKNYLVVQPRSISDETTLESSL HCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA