Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977424

Identifier: 156977424

GI number: 156977424

Start: 1393300

End: 1394484

Strand: Direct

Name: 156977424

Synonym: VIBHAR_06211

Alternate gene names: NA

Gene position: 1393300-1394484 (Clockwise)

Preceding gene: 156977423

Following gene: 156977425

Centisome position: 63.22

GC content: 45.06

Gene sequence:

>1185_bases
ATGTTTTTGCAAAGACCCAAACCTTACAGCGATGAAAGCCTCGAGAGCTTCTTCATCCGTGTGGCAAACAAAAATGGATA
TAGTGATGTCCATCGTTTCCTAGAAGCCACCAAACGCTTCCTACAAGACATTGACCATACCGGCTATCAAACCTTTCCAA
CCGATATCGCAAAGATTAACCCCTGCTCGGCCAAAGATAGCTCTGGTGCCCGAACTGCCTCACTCCTGAAACTCGCGCAA
TTAACGTTTAACGAACCTACCGAGTTACTTGGATTAGCAATTAACAGAACAAACTTAAAATATTCTCCATCCACAAGTGC
CGTGATCCGTGGCTCAGAAGTTTTTCCTCGCAGTTTACTCCGGACAAGGTCCATACCCTGCTGCCCATTATGCTTACAAG
AAAATGGCTACGCCAGTTACCTATGGCATTTGGAGGGTTACGATCACTGTCATATTCATAACGCACCTTTAATTACCTCT
TGTAGCTGTGGCAACGAGTTTGACTATCGAGTATCTGAGTTAAAAGGAGTTTGCAGCAATTGCAAGGAGCCTATCGCGAC
AAAAAGTAGAGGCAGGGAACCCAAGCAGGCATACAACGTTGCAAATTGGCTCGCTGGCAACGGCTCTGAAGAGCTGCCCA
ACCTCCCAAAGAGCTATCGCTGGGGCTTGATTCATTGGTGGACACACCTTAATGACGATAAATTCGACCATGGTTCATTC
ACCCATTTTTTCGCAAACTGGCCAAGCGCATTTCATTCAATGATCGATGCTGAAATCGAGTTCAACCTTGAGCATGCTTT
TGTCAACATATCTGAGTTAAGACTAAAAGACCTTCTAGGCCGACTATTTTTCAGTTCGATTCGGCTGCCTGAACGGAATC
TTCGACACAATATCATCCTAAGCGAGCTTCTCAGCCACTTAGAAAAGCGTTTGTGGCAAGACAAGGGGCTCATCGCTAAT
CTTAAAATGAATGCGTTAGAAGCGACCGTACTGCTAAATTGTAGCCTCGATCAGATCGCATCAATAGTTGCACAACGTAT
TTTGAAGCCAAACCGCAGAACCAAGCCGAACAGCCCTCTTGAACATACCGACTATTTATTTCATTTCGGCGATATTTTCT
GTCTTTGGTTAGCTGAGTTCCAAACCGATGAGTTTAACCGTTCGTTCTATGTGTCGAGGTGGTAA

Upstream 100 bases:

>100_bases
GTTTATGACAAAATCCAAAAGTTGTGGCTGGCGTCTCAATTCCAAACAAAACACGGCTAATCATACTGTTAGCTCCTATA
TTGAACTCAGGAGGAGCTCT

Downstream 100 bases:

>100_bases
ATGCAAACTCTGAAAGAGCTAATCGCATCCAATCCTGACGACTTAAAAGCAACTCTAAAGCGTGTATTTCGTCCTCTCAC
ACCGCATATTGCGATCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MFLQRPKPYSDESLESFFIRVANKNGYSDVHRFLEATKRFLQDIDHTGYQTFPTDIAKINPCSAKDSSGARTASLLKLAQ
LTFNEPTELLGLAINRTNLKYSPSTSAVIRGSEVFPRSLLRTRSIPCCPLCLQENGYASYLWHLEGYDHCHIHNAPLITS
CSCGNEFDYRVSELKGVCSNCKEPIATKSRGREPKQAYNVANWLAGNGSEELPNLPKSYRWGLIHWWTHLNDDKFDHGSF
THFFANWPSAFHSMIDAEIEFNLEHAFVNISELRLKDLLGRLFFSSIRLPERNLRHNIILSELLSHLEKRLWQDKGLIAN
LKMNALEATVLLNCSLDQIASIVAQRILKPNRRTKPNSPLEHTDYLFHFGDIFCLWLAEFQTDEFNRSFYVSRW

Sequences:

>Translated_394_residues
MFLQRPKPYSDESLESFFIRVANKNGYSDVHRFLEATKRFLQDIDHTGYQTFPTDIAKINPCSAKDSSGARTASLLKLAQ
LTFNEPTELLGLAINRTNLKYSPSTSAVIRGSEVFPRSLLRTRSIPCCPLCLQENGYASYLWHLEGYDHCHIHNAPLITS
CSCGNEFDYRVSELKGVCSNCKEPIATKSRGREPKQAYNVANWLAGNGSEELPNLPKSYRWGLIHWWTHLNDDKFDHGSF
THFFANWPSAFHSMIDAEIEFNLEHAFVNISELRLKDLLGRLFFSSIRLPERNLRHNIILSELLSHLEKRLWQDKGLIAN
LKMNALEATVLLNCSLDQIASIVAQRILKPNRRTKPNSPLEHTDYLFHFGDIFCLWLAEFQTDEFNRSFYVSRW
>Mature_394_residues
MFLQRPKPYSDESLESFFIRVANKNGYSDVHRFLEATKRFLQDIDHTGYQTFPTDIAKINPCSAKDSSGARTASLLKLAQ
LTFNEPTELLGLAINRTNLKYSPSTSAVIRGSEVFPRSLLRTRSIPCCPLCLQENGYASYLWHLEGYDHCHIHNAPLITS
CSCGNEFDYRVSELKGVCSNCKEPIATKSRGREPKQAYNVANWLAGNGSEELPNLPKSYRWGLIHWWTHLNDDKFDHGSF
THFFANWPSAFHSMIDAEIEFNLEHAFVNISELRLKDLLGRLFFSSIRLPERNLRHNIILSELLSHLEKRLWQDKGLIAN
LKMNALEATVLLNCSLDQIASIVAQRILKPNRRTKPNSPLEHTDYLFHFGDIFCLWLAEFQTDEFNRSFYVSRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45379; Mature: 45379

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLQRPKPYSDESLESFFIRVANKNGYSDVHRFLEATKRFLQDIDHTGYQTFPTDIAKIN
CCCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
PCSAKDSSGARTASLLKLAQLTFNEPTELLGLAINRTNLKYSPSTSAVIRGSEVFPRSLL
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCEECCCCCEEEECCHHHHHHHH
RTRSIPCCPLCLQENGYASYLWHLEGYDHCHIHNAPLITSCSCGNEFDYRVSELKGVCSN
HHCCCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHH
CKEPIATKSRGREPKQAYNVANWLAGNGSEELPNLPKSYRWGLIHWWTHLNDDKFDHGSF
CCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCCHHHCCCCEEEEECCCCCCCCCCCH
THFFANWPSAFHSMIDAEIEFNLEHAFVNISELRLKDLLGRLFFSSIRLPERNLRHNIIL
HHHHHHHHHHHHHHHCCCEEEEEHHHEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SELLSHLEKRLWQDKGLIANLKMNALEATVLLNCSLDQIASIVAQRILKPNRRTKPNSPL
HHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC
EHTDYLFHFGDIFCLWLAEFQTDEFNRSFYVSRW
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
>Mature Secondary Structure
MFLQRPKPYSDESLESFFIRVANKNGYSDVHRFLEATKRFLQDIDHTGYQTFPTDIAKIN
CCCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
PCSAKDSSGARTASLLKLAQLTFNEPTELLGLAINRTNLKYSPSTSAVIRGSEVFPRSLL
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCEECCCCCEEEECCHHHHHHHH
RTRSIPCCPLCLQENGYASYLWHLEGYDHCHIHNAPLITSCSCGNEFDYRVSELKGVCSN
HHCCCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHH
CKEPIATKSRGREPKQAYNVANWLAGNGSEELPNLPKSYRWGLIHWWTHLNDDKFDHGSF
CCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCCHHHCCCCEEEEECCCCCCCCCCCH
THFFANWPSAFHSMIDAEIEFNLEHAFVNISELRLKDLLGRLFFSSIRLPERNLRHNIIL
HHHHHHHHHHHHHHHCCCEEEEEHHHEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SELLSHLEKRLWQDKGLIANLKMNALEATVLLNCSLDQIASIVAQRILKPNRRTKPNSPL
HHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC
EHTDYLFHFGDIFCLWLAEFQTDEFNRSFYVSRW
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA