| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977417
Identifier: 156977417
GI number: 156977417
Start: 1384197
End: 1385447
Strand: Direct
Name: 156977417
Synonym: VIBHAR_06204
Alternate gene names: NA
Gene position: 1384197-1385447 (Clockwise)
Preceding gene: 156977413
Following gene: 156977419
Centisome position: 62.8
GC content: 48.04
Gene sequence:
>1251_bases ATGCATCCATCTATAAGATTCATCAACAGCGCCAAGCTCTCTCGGTCTGATCTTGCTTGTCTGCTCACCCCCGAAGAATG CGTACAACAATTTTCTCGATTTCGGAATCCAACTGATGTTGTGAAAAGTTTGCCTCGCGAGTTAGCACAGCGCGTCTCAC TAACGGCAAAAAAATCTACAGCGGGCTTACTCAGTGCGTTGCAAAAGGAGCTTGTTCAAGCGAACTGGATTGCACTCACG AATACACCAAACCATCATTCCCTTGATGATGCTCGATTTCGGAATGCGCCTAGACTTAAATCTCGTATTGAGACATTGGC TGACATAAAAGAGAGCCGCACACCTAAAGCATCCTACAAGCCCGTTACCGACGATGTCACCTTGGTGCGTAACTACGCTC ACGTGCCTTACGAACCTAGCCCAGAACATAAGATAGTGGTGGAGTTTGCGGGACAATGGTCAAGCCATGCCGCGTGTCTA ATGTTACTAAAATCAGAAGATCAGGCACCGAAAGTCACCAATGCACGAAGCGACATGGAGAATCAACACCGTAGCCTTGC CACATTTGCAGGATTGAGTGAAGAAGCAAGGGACCTCTGTATTAAAGTCCCGTGTACTGATCAACCGCAACCCATTACTC TGCCGCTCGCAACCGCACTTACACCCGTTGAAAAAGACGCCGCTATGGAAGAATGGGATAATGTATTGATACCAGTTCTC CCTATGCTTGAAAGTGGTGGAGGATCTGAGTTGTGCTCTTCTGGGTATTTCTATGTGATTTGGAACAACAAGGTGTGGCG CGAAGTAGAGGTGGCGCCGAACGGTTACTTTGCTGACGTCGATTTAGAGTACTATCGTAATGCCGAACCAGAGGGCGGCA AAGCGTTCCGCCACGTCAATATTGATGGTGCCAATTTAGTGAATGAGTATTATGTCGGGGAAGAGCCGTTTGAGCTGTAT CAAGCTGGCAATAAAGTATACTCAGGCACACTCAATGTGGACCAAAGTGCGCGCGTCTTCCGTTTGACGGAAGAAGAAGT GGAGGTGGCATTTCCAACATTAGACATCGATCCTATCACCGTTAAAACAGTAAAAAGCCCAAGTAAAGCTGGCGACGGTG ACGATAGAGTCGCACAAGGTACGCCATTGCCCCACATTTGGGTCCCTTACAAAATCAATGGTGAGATTCAGTCAGAGTCT GAGGGATCCCCACATCTTTTCACCGGAACTCTGCCGCACTTATCGCTTTGA
Upstream 100 bases:
>100_bases AAACGATTATCAATCACCAAATCGTTAAAATTAAGTCTTATCAGCTTAACTTATCACCGTGGCCACTTTGTTTTAACGAC TTGGCCACGGAGATCTGCCA
Downstream 100 bases:
>100_bases GGCCTCCTACGGCTAAGGCCAGATCCTTCACGCTAAATGAGTAAGCTTCTCTTCCTATCAACTCTTTACCGAGAAAAAAG TAGGAAAGTACCCGGCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MHPSIRFINSAKLSRSDLACLLTPEECVQQFSRFRNPTDVVKSLPRELAQRVSLTAKKSTAGLLSALQKELVQANWIALT NTPNHHSLDDARFRNAPRLKSRIETLADIKESRTPKASYKPVTDDVTLVRNYAHVPYEPSPEHKIVVEFAGQWSSHAACL MLLKSEDQAPKVTNARSDMENQHRSLATFAGLSEEARDLCIKVPCTDQPQPITLPLATALTPVEKDAAMEEWDNVLIPVL PMLESGGGSELCSSGYFYVIWNNKVWREVEVAPNGYFADVDLEYYRNAEPEGGKAFRHVNIDGANLVNEYYVGEEPFELY QAGNKVYSGTLNVDQSARVFRLTEEEVEVAFPTLDIDPITVKTVKSPSKAGDGDDRVAQGTPLPHIWVPYKINGEIQSES EGSPHLFTGTLPHLSL
Sequences:
>Translated_416_residues MHPSIRFINSAKLSRSDLACLLTPEECVQQFSRFRNPTDVVKSLPRELAQRVSLTAKKSTAGLLSALQKELVQANWIALT NTPNHHSLDDARFRNAPRLKSRIETLADIKESRTPKASYKPVTDDVTLVRNYAHVPYEPSPEHKIVVEFAGQWSSHAACL MLLKSEDQAPKVTNARSDMENQHRSLATFAGLSEEARDLCIKVPCTDQPQPITLPLATALTPVEKDAAMEEWDNVLIPVL PMLESGGGSELCSSGYFYVIWNNKVWREVEVAPNGYFADVDLEYYRNAEPEGGKAFRHVNIDGANLVNEYYVGEEPFELY QAGNKVYSGTLNVDQSARVFRLTEEEVEVAFPTLDIDPITVKTVKSPSKAGDGDDRVAQGTPLPHIWVPYKINGEIQSES EGSPHLFTGTLPHLSL >Mature_416_residues MHPSIRFINSAKLSRSDLACLLTPEECVQQFSRFRNPTDVVKSLPRELAQRVSLTAKKSTAGLLSALQKELVQANWIALT NTPNHHSLDDARFRNAPRLKSRIETLADIKESRTPKASYKPVTDDVTLVRNYAHVPYEPSPEHKIVVEFAGQWSSHAACL MLLKSEDQAPKVTNARSDMENQHRSLATFAGLSEEARDLCIKVPCTDQPQPITLPLATALTPVEKDAAMEEWDNVLIPVL PMLESGGGSELCSSGYFYVIWNNKVWREVEVAPNGYFADVDLEYYRNAEPEGGKAFRHVNIDGANLVNEYYVGEEPFELY QAGNKVYSGTLNVDQSARVFRLTEEEVEVAFPTLDIDPITVKTVKSPSKAGDGDDRVAQGTPLPHIWVPYKINGEIQSES EGSPHLFTGTLPHLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46287; Mature: 46287
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPSIRFINSAKLSRSDLACLLTPEECVQQFSRFRNPTDVVKSLPRELAQRVSLTAKKST CCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AGLLSALQKELVQANWIALTNTPNHHSLDDARFRNAPRLKSRIETLADIKESRTPKASYK HHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC PVTDDVTLVRNYAHVPYEPSPEHKIVVEFAGQWSSHAACLMLLKSEDQAPKVTNARSDME CCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHH NQHRSLATFAGLSEEARDLCIKVPCTDQPQPITLPLATALTPVEKDAAMEEWDNVLIPVL HHHHHHHHHHCCCHHCCCEEEECCCCCCCCCEEEEHHHHCCCCHHHHHHHHHCCEEEEHH PMLESGGGSELCSSGYFYVIWNNKVWREVEVAPNGYFADVDLEYYRNAEPEGGKAFRHVN HHHCCCCCHHHHHCCCEEEEECCCEEEEEEECCCCEEEEEEHHHHCCCCCCCCCEEEEEE IDGANLVNEYYVGEEPFELYQAGNKVYSGTLNVDQSARVFRLTEEEVEVAFPTLDIDPIT CCCHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCEEEEEEHHHHEEEECCCCCCCEE VKTVKSPSKAGDGDDRVAQGTPLPHIWVPYKINGEIQSESEGSPHLFTGTLPHLSL EEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MHPSIRFINSAKLSRSDLACLLTPEECVQQFSRFRNPTDVVKSLPRELAQRVSLTAKKST CCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AGLLSALQKELVQANWIALTNTPNHHSLDDARFRNAPRLKSRIETLADIKESRTPKASYK HHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC PVTDDVTLVRNYAHVPYEPSPEHKIVVEFAGQWSSHAACLMLLKSEDQAPKVTNARSDME CCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHH NQHRSLATFAGLSEEARDLCIKVPCTDQPQPITLPLATALTPVEKDAAMEEWDNVLIPVL HHHHHHHHHHCCCHHCCCEEEECCCCCCCCCEEEEHHHHCCCCHHHHHHHHHCCEEEEHH PMLESGGGSELCSSGYFYVIWNNKVWREVEVAPNGYFADVDLEYYRNAEPEGGKAFRHVN HHHCCCCCHHHHHCCCEEEEECCCEEEEEEECCCCEEEEEEHHHHCCCCCCCCCEEEEEE IDGANLVNEYYVGEEPFELYQAGNKVYSGTLNVDQSARVFRLTEEEVEVAFPTLDIDPIT CCCHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCEEEEEEHHHHEEEECCCCCCCEE VKTVKSPSKAGDGDDRVAQGTPLPHIWVPYKINGEIQSESEGSPHLFTGTLPHLSL EEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA