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The map label for this gene is uvrD [C]

Identifier: 156977415

GI number: 156977415

Start: 1380958

End: 1381449

Strand: Reverse

Name: uvrD [C]

Synonym: VIBHAR_06202

Alternate gene names: 156977415

Gene position: 1381449-1380958 (Counterclockwise)

Preceding gene: 156977416

Following gene: 156977414

Centisome position: 62.68

GC content: 44.11

Gene sequence:

>492_bases
ATGAATGAAGCTTGGGTTCCCAAAGATAATCTGGTTTTTGATGATAAATCACTAGAGATAATCCACTGTAATGCAAACCT
GGCAGTTTGGGCTGGTCCTGGGGCCGGAAAAACTGAACTTCTAGCGCAGAAGGCCTGTTTTTTATTAGAAACAGAACGTT
GTGAATGGCCATTCAGTATTCTATCGATCTCTCGTAAGAGGGCATCGGCTTCGAATCTAAAAGAACGTGTCCAAATGCGG
AGTGGGGATGAATTATCTGAGAGGTTTCACTCCTTCACAATTGAGGCTTTTACAAAAAGCATCGTGGATAGGTTTATGTG
CGTATTGCCAAAGCACAGACAGCCCAGTCCAGACTATCAGGTAACGAATGGGGGTTCCAACTTCCCAAAGAGTTTGAGCT
TTGATCATATAACGTCAATCGCTCTTGAAATCTGTAATACATCTAGTGACCTTATGGCTTCACTGCGGGTTCTGAGGGCT
CCCCACAACTAG

Upstream 100 bases:

>100_bases
ATTTTGAGTCGGGTGAGAACAAAGATAAGATCCCTGAAAGCTTCCAAGAAATGATAAAGCATATCATTAGAGAAGTCTCT
TCTTTGCCGGAGTAAGCGCT

Downstream 100 bases:

>100_bases
CATAGAAGAATCATGTAGATAGCGTGAAAAGTAGGCAGATTCATTTTGATCGGCGATTATAGCATCAATTGAAAAGATAT
GACCCGACGAGTCTCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; UvrD/REP Helicase Family Protein; DNA Helicase; Helicase Superfamily Protein I; ATP-Dependent DNA Helicase; Plasmid-Related Helicase; Uvrd/Rep Helicase

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNEAWVPKDNLVFDDKSLEIIHCNANLAVWAGPGAGKTELLAQKACFLLETERCEWPFSILSISRKRASASNLKERVQMR
SGDELSERFHSFTIEAFTKSIVDRFMCVLPKHRQPSPDYQVTNGGSNFPKSLSFDHITSIALEICNTSSDLMASLRVLRA
PHN

Sequences:

>Translated_163_residues
MNEAWVPKDNLVFDDKSLEIIHCNANLAVWAGPGAGKTELLAQKACFLLETERCEWPFSILSISRKRASASNLKERVQMR
SGDELSERFHSFTIEAFTKSIVDRFMCVLPKHRQPSPDYQVTNGGSNFPKSLSFDHITSIALEICNTSSDLMASLRVLRA
PHN
>Mature_163_residues
MNEAWVPKDNLVFDDKSLEIIHCNANLAVWAGPGAGKTELLAQKACFLLETERCEWPFSILSISRKRASASNLKERVQMR
SGDELSERFHSFTIEAFTKSIVDRFMCVLPKHRQPSPDYQVTNGGSNFPKSLSFDHITSIALEICNTSSDLMASLRVLRA
PHN

Specific function: Has Both Atpase And Helicase Activities. Unwinds DNA Duplexes With 3' To 5' Polarity With Respect To The Bound Strand And Initiates Unwinding Most Effectively When A Single-Stranded Region Is Present. Involved In The Post-Incision Events Of Nucleotide Exc

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3000 [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 18327; Mature: 18327

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAWVPKDNLVFDDKSLEIIHCNANLAVWAGPGAGKTELLAQKACFLLETERCEWPFSI
CCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHEECCCCCCCHHH
LSISRKRASASNLKERVQMRSGDELSERFHSFTIEAFTKSIVDRFMCVLPKHRQPSPDYQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VTNGGSNFPKSLSFDHITSIALEICNTSSDLMASLRVLRAPHN
ECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNEAWVPKDNLVFDDKSLEIIHCNANLAVWAGPGAGKTELLAQKACFLLETERCEWPFSI
CCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHEECCCCCCCHHH
LSISRKRASASNLKERVQMRSGDELSERFHSFTIEAFTKSIVDRFMCVLPKHRQPSPDYQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VTNGGSNFPKSLSFDHITSIALEICNTSSDLMASLRVLRAPHN
ECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA