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The map label for this gene is torT [H]

Identifier: 156977334

GI number: 156977334

Start: 1284855

End: 1285706

Strand: Direct

Name: torT [H]

Synonym: VIBHAR_06120

Alternate gene names: 156977334

Gene position: 1284855-1285706 (Clockwise)

Preceding gene: 156977332

Following gene: 156977335

Centisome position: 58.3

GC content: 49.06

Gene sequence:

>852_bases
ATGGTTTCCGAAGCGGAAAAACTCGGTGTTGACCTGCGCGTTCTCGAAGCTGGGGGATATCCGAACAAAACCCGTCAAGA
GCAGCAGCTTGCTTTGTGTACCCAATGGGGCGCCGATGCAATCATTCTCGGGACGGTCGATCCGCAAGCCTACGAGCACA
ACCTTAAAAACTGGGTTGGCAATACTCCAGTTTTTGCCACCGTTAACCAGCTTGAACTCGATGAAGAACAAACCAAACTG
CTGAAAGGGGTAGTTGGTGTTGATTGGTACTGGATGGGCTACGAAGCTGGCAAGTACTTAGCAGAAAAGCACCCTAAGAG
CTCAGGTAAAACCAATATTGCTCTGCTGCTTGGCCCAAGAACTCGTGGCGGAACAAAACCTGTAACGACAGGGTTTTATG
AAGCCATCAAAAACAGCGACATTAACATCGTTGACTCTTACTGGGCCGACAACGACAAGGAGTTACAGCGTAACCTTGTT
CAGCGCGTGATTGATATGGGAAACATCGACTATATCGTTGGTAGTGCCGTTGCTATAGAGGCCGCCATCAGTGAACTGCG
CAGTGCGGGCAAGGCCAAAGACATTGGTCTGGTTTCTGTGTACCTCAGCCACGGTGTTTATCGCGGCCTACTTCGTCATA
AAGTGCTGTTCGCTCCAACCGACAAAATGGTTGAGCAAGGACGCCTTTCTGTGATGCAAGCGACGCACTATTTACGCCAT
GAACCGTATGAAGAACACGCATCCCCAGTGATCAAACCGTTAACACCAAAGACGCTTCATGACGACACAATTGAAGAATC
GTTATCTCCGTCAGAATATAGACCGACTTTCAGCGTTAAGGCTGTTGATTGA

Upstream 100 bases:

>100_bases
ATTGTCACTTTTCGCTTCAGTGCCAAGCTTTGCTGCAGAAAAAATCTGTGCCATTTACCCTCATTTAAAGGATTCATACT
GGCTATCAGTAAACTATGGA

Downstream 100 bases:

>100_bases
TTGGCAAAAAAGTGTTCTATTTGATGGTAATGAATTTAAGATCATTTAAGATGGAAATAACTTAATGCAAAAAACAACTC
GTACCATGCCAGCACACAAG

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MVSEAEKLGVDLRVLEAGGYPNKTRQEQQLALCTQWGADAIILGTVDPQAYEHNLKNWVGNTPVFATVNQLELDEEQTKL
LKGVVGVDWYWMGYEAGKYLAEKHPKSSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNSDINIVDSYWADNDKELQRNLV
QRVIDMGNIDYIVGSAVAIEAAISELRSAGKAKDIGLVSVYLSHGVYRGLLRHKVLFAPTDKMVEQGRLSVMQATHYLRH
EPYEEHASPVIKPLTPKTLHDDTIEESLSPSEYRPTFSVKAVD

Sequences:

>Translated_283_residues
MVSEAEKLGVDLRVLEAGGYPNKTRQEQQLALCTQWGADAIILGTVDPQAYEHNLKNWVGNTPVFATVNQLELDEEQTKL
LKGVVGVDWYWMGYEAGKYLAEKHPKSSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNSDINIVDSYWADNDKELQRNLV
QRVIDMGNIDYIVGSAVAIEAAISELRSAGKAKDIGLVSVYLSHGVYRGLLRHKVLFAPTDKMVEQGRLSVMQATHYLRH
EPYEEHASPVIKPLTPKTLHDDTIEESLSPSEYRPTFSVKAVD
>Mature_283_residues
MVSEAEKLGVDLRVLEAGGYPNKTRQEQQLALCTQWGADAIILGTVDPQAYEHNLKNWVGNTPVFATVNQLELDEEQTKL
LKGVVGVDWYWMGYEAGKYLAEKHPKSSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNSDINIVDSYWADNDKELQRNLV
QRVIDMGNIDYIVGSAVAIEAAISELRSAGKAKDIGLVSVYLSHGVYRGLLRHKVLFAPTDKMVEQGRLSVMQATHYLRH
EPYEEHASPVIKPLTPKTLHDDTIEESLSPSEYRPTFSVKAVD

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=279, Percent_Identity=41.2186379928315, Blast_Score=178, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 31467; Mature: 31467

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSEAEKLGVDLRVLEAGGYPNKTRQEQQLALCTQWGADAIILGTVDPQAYEHNLKNWVG
CCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC
NTPVFATVNQLELDEEQTKLLKGVVGVDWYWMGYEAGKYLAEKHPKSSGKTNIALLLGPR
CCCEEEEEHHHHCCHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCEEEEEECCC
TRGGTKPVTTGFYEAIKNSDINIVDSYWADNDKELQRNLVQRVIDMGNIDYIVGSAVAIE
CCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AAISELRSAGKAKDIGLVSVYLSHGVYRGLLRHKVLFAPTDKMVEQGRLSVMQATHYLRH
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHC
EPYEEHASPVIKPLTPKTLHDDTIEESLSPSEYRPTFSVKAVD
CCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MVSEAEKLGVDLRVLEAGGYPNKTRQEQQLALCTQWGADAIILGTVDPQAYEHNLKNWVG
CCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC
NTPVFATVNQLELDEEQTKLLKGVVGVDWYWMGYEAGKYLAEKHPKSSGKTNIALLLGPR
CCCEEEEEHHHHCCHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCEEEEEECCC
TRGGTKPVTTGFYEAIKNSDINIVDSYWADNDKELQRNLVQRVIDMGNIDYIVGSAVAIE
CCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AAISELRSAGKAKDIGLVSVYLSHGVYRGLLRHKVLFAPTDKMVEQGRLSVMQATHYLRH
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHC
EPYEEHASPVIKPLTPKTLHDDTIEESLSPSEYRPTFSVKAVD
CCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]