| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is bhuA [H]
Identifier: 156977328
GI number: 156977328
Start: 1275614
End: 1277086
Strand: Direct
Name: bhuA [H]
Synonym: VIBHAR_06114
Alternate gene names: 156977328
Gene position: 1275614-1277086 (Clockwise)
Preceding gene: 156977327
Following gene: 156977329
Centisome position: 57.88
GC content: 46.71
Gene sequence:
>1473_bases ATGGAGGTTACGGTGTCCGCTTCAACCGTATTTAAGTTAAGCCCACTTACCATCGCCCTTTTCGTCGCTTCCCAAGTGAC TTACGCCAACGATGACATGGAAGTGATGGAGGTGCTAGGCCACACTCCGGAAGGAATCGATATTACGATTGACTCCGATC AGCTCGCCAAATCACAGGCACAAGATCTGAATGACATTTTCCGTAAAGATGCAGAAATTAGTGTTGGTGGCTCTTCTGGT GTTTCTCAAAAGATCTATGTCCGTGGTCTGGAAGATACCATGTTGAATGTGTCTATCGACGGCGCGGCACAATCCGGTAA CCTATTCCATCACCAAGGTCGATTATCTATCGAGCCTGAACTGCTCAAGCAAGTTGATGTTAGCGCGGGAGCAGGACGAG CAACAGATGGCCCAGGAGCATTGGGTGGCGCTATAAAGTTCACCACTAAAGACGCACATGACCTCCTTACTGCAGGTGAA ACCTACGGCGCTATGCTCAAAGGCGGTTACTACACCAATAATGAAGGTTACAAAGTTTCGGCAAGTTTGTATGGAGAAGT CGCCGATCAGCTTGGCCTACTTGCATCATTTGGTTACGTCGACGGGGATAACATCGAAGACGGCAAAGGCCAGGAGCAGC CGTACACTGCGTTAGAACAGCAAGTTGCGATCCTTAAGCTATCCGGTCAACTCAACGACGAACACTACCTCTCGGTAAGC TACGACTATCGTAATGATGATGGCCGTCGCTTAAATCGCCCCCACTTCCAACCAAGCTTTAAAAATGCGCCTCTCGATCA AGAAACCGATCGTTCTACTTTTACGCTTAACCACAAATACAACGCAAGCGACCTTTTCAATCTCGACACCACTTTCTACT ACACCGATAGCCGCTTAGCTCATAAAGATCACCCTCGCTGGGGCACCAGTGATGGCTCAATTCAAACGTCCGGCGTAAAG ATCTTCAATACGAGCAAATTAACAGGCCATACCTTGGTTTACGGTTTGGATTACAAGAAAGACAAATCTGAGTTTGAAAC CAACTACGATGGTAAAAAAAACGATGAGGAGAAAGGCACCGTTTACGGCTTGTTTGTTCAAGATGATTGGATGCTAACAG AAACCATCATTCTTACCGCTGGTGCTCGTTATGACTGGTATGAGCTTACTGATAACATGGAGCAAGACTTCGATTCGAGC GGCTTTAGCCCTAACGTGGGTATTAATTACAATCCGTTGGAAGGTTTGAACCTATTTGCTAGTTATGCAGAAGCGTTTCG TGGCCAACAAATCAAAGAACTGTTTGTCATCGACTACCGCGAAAACGACCCAAATCGTAAGCCTGAAGAAGCACGTAACT TAGAGCTAGGGGCAAATTACCAATACGATGATTTCTTCGCTGGCATCACATTCTTTGATAGTACAATCAAAGACGTGGTA ACAAACCAAGGCCTGAGGGCTCCCCACAACTAG
Upstream 100 bases:
>100_bases TTAACGTCTGCTGACTACAAGGATTGTAACAGTTGTAAAAGTCGTTTACTCAGAGTGGAAGAATCACCAAAATCTCACTC GATAATAATTCTCATTAACA
Downstream 100 bases:
>100_bases CATAGAAGAATCATGTAGATAGCGTGAAAAGTAGGCAGATTCATTTTGATCGGCGATTATAGCATCAATTGAAAAGATAT GACCCGACGAGTCTCATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Brucella heme uptake protein A [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MEVTVSASTVFKLSPLTIALFVASQVTYANDDMEVMEVLGHTPEGIDITIDSDQLAKSQAQDLNDIFRKDAEISVGGSSG VSQKIYVRGLEDTMLNVSIDGAAQSGNLFHHQGRLSIEPELLKQVDVSAGAGRATDGPGALGGAIKFTTKDAHDLLTAGE TYGAMLKGGYYTNNEGYKVSASLYGEVADQLGLLASFGYVDGDNIEDGKGQEQPYTALEQQVAILKLSGQLNDEHYLSVS YDYRNDDGRRLNRPHFQPSFKNAPLDQETDRSTFTLNHKYNASDLFNLDTTFYYTDSRLAHKDHPRWGTSDGSIQTSGVK IFNTSKLTGHTLVYGLDYKKDKSEFETNYDGKKNDEEKGTVYGLFVQDDWMLTETIILTAGARYDWYELTDNMEQDFDSS GFSPNVGINYNPLEGLNLFASYAEAFRGQQIKELFVIDYRENDPNRKPEEARNLELGANYQYDDFFAGITFFDSTIKDVV TNQGLRAPHN
Sequences:
>Translated_490_residues MEVTVSASTVFKLSPLTIALFVASQVTYANDDMEVMEVLGHTPEGIDITIDSDQLAKSQAQDLNDIFRKDAEISVGGSSG VSQKIYVRGLEDTMLNVSIDGAAQSGNLFHHQGRLSIEPELLKQVDVSAGAGRATDGPGALGGAIKFTTKDAHDLLTAGE TYGAMLKGGYYTNNEGYKVSASLYGEVADQLGLLASFGYVDGDNIEDGKGQEQPYTALEQQVAILKLSGQLNDEHYLSVS YDYRNDDGRRLNRPHFQPSFKNAPLDQETDRSTFTLNHKYNASDLFNLDTTFYYTDSRLAHKDHPRWGTSDGSIQTSGVK IFNTSKLTGHTLVYGLDYKKDKSEFETNYDGKKNDEEKGTVYGLFVQDDWMLTETIILTAGARYDWYELTDNMEQDFDSS GFSPNVGINYNPLEGLNLFASYAEAFRGQQIKELFVIDYRENDPNRKPEEARNLELGANYQYDDFFAGITFFDSTIKDVV TNQGLRAPHN >Mature_490_residues MEVTVSASTVFKLSPLTIALFVASQVTYANDDMEVMEVLGHTPEGIDITIDSDQLAKSQAQDLNDIFRKDAEISVGGSSG VSQKIYVRGLEDTMLNVSIDGAAQSGNLFHHQGRLSIEPELLKQVDVSAGAGRATDGPGALGGAIKFTTKDAHDLLTAGE TYGAMLKGGYYTNNEGYKVSASLYGEVADQLGLLASFGYVDGDNIEDGKGQEQPYTALEQQVAILKLSGQLNDEHYLSVS YDYRNDDGRRLNRPHFQPSFKNAPLDQETDRSTFTLNHKYNASDLFNLDTTFYYTDSRLAHKDHPRWGTSDGSIQTSGVK IFNTSKLTGHTLVYGLDYKKDKSEFETNYDGKKNDEEKGTVYGLFVQDDWMLTETIILTAGARYDWYELTDNMEQDFDSS GFSPNVGINYNPLEGLNLFASYAEAFRGQQIKELFVIDYRENDPNRKPEEARNLELGANYQYDDFFAGITFFDSTIKDVV TNQGLRAPHN
Specific function: Heme transporter playing an important role in stationary-phase iron acquisition and required for maintenance of chronic infection in mice [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 54416; Mature: 54416
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTVSASTVFKLSPLTIALFVASQVTYANDDMEVMEVLGHTPEGIDITIDSDQLAKSQA CEEEEECCEEEEECCCEEEEEEHHHEEECCCCHHHHHHHCCCCCCEEEEECCHHHHHHHH QDLNDIFRKDAEISVGGSSGVSQKIYVRGLEDTMLNVSIDGAAQSGNLFHHQGRLSIEPE HHHHHHHHCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCHH LLKQVDVSAGAGRATDGPGALGGAIKFTTKDAHDLLTAGETYGAMLKGGYYTNNEGYKVS HHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHHHHEECCEEECCCCEEEE ASLYGEVADQLGLLASFGYVDGDNIEDGKGQEQPYTALEQQVAILKLSGQLNDEHYLSVS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCCCCEEEEEE YDYRNDDGRRLNRPHFQPSFKNAPLDQETDRSTFTLNHKYNASDLFNLDTTFYYTDSRLA EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCC HKDHPRWGTSDGSIQTSGVKIFNTSKLTGHTLVYGLDYKKDKSEFETNYDGKKNDEEKGT CCCCCCCCCCCCCEEECCEEEEECCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCC VYGLFVQDDWMLTETIILTAGARYDWYELTDNMEQDFDSSGFSPNVGINYNPLEGLNLFA EEEEEEECCCEEEEEEEEECCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHH SYAEAFRGQQIKELFVIDYRENDPNRKPEEARNLELGANYQYDDFFAGITFFDSTIKDVV HHHHHHCCCCEEEEEEEEEECCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH TNQGLRAPHN HCCCCCCCCC >Mature Secondary Structure MEVTVSASTVFKLSPLTIALFVASQVTYANDDMEVMEVLGHTPEGIDITIDSDQLAKSQA CEEEEECCEEEEECCCEEEEEEHHHEEECCCCHHHHHHHCCCCCCEEEEECCHHHHHHHH QDLNDIFRKDAEISVGGSSGVSQKIYVRGLEDTMLNVSIDGAAQSGNLFHHQGRLSIEPE HHHHHHHHCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCHH LLKQVDVSAGAGRATDGPGALGGAIKFTTKDAHDLLTAGETYGAMLKGGYYTNNEGYKVS HHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHHHHEECCEEECCCCEEEE ASLYGEVADQLGLLASFGYVDGDNIEDGKGQEQPYTALEQQVAILKLSGQLNDEHYLSVS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCCCCEEEEEE YDYRNDDGRRLNRPHFQPSFKNAPLDQETDRSTFTLNHKYNASDLFNLDTTFYYTDSRLA EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCC HKDHPRWGTSDGSIQTSGVKIFNTSKLTGHTLVYGLDYKKDKSEFETNYDGKKNDEEKGT CCCCCCCCCCCCCEEECCEEEEECCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCC VYGLFVQDDWMLTETIILTAGARYDWYELTDNMEQDFDSSGFSPNVGINYNPLEGLNLFA EEEEEEECCCEEEEEEEEECCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHH SYAEAFRGQQIKELFVIDYRENDPNRKPEEARNLELGANYQYDDFFAGITFFDSTIKDVV HHHHHHCCCCEEEEEEEEEECCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH TNQGLRAPHN HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA