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The map label for this gene is atpF2

Identifier: 156977322

GI number: 156977322

Start: 1270581

End: 1271051

Strand: Reverse

Name: atpF2

Synonym: VIBHAR_06108

Alternate gene names: 156977322

Gene position: 1271051-1270581 (Counterclockwise)

Preceding gene: 156977323

Following gene: 156977321

Centisome position: 57.67

GC content: 47.56

Gene sequence:

>471_bases
ATGAACTTAAATGCCTCAATGTTTGGTCAGGCGATCTCCTTCGTGATTTTCGTTTGGCTGTGCATGAAATATGTCTGGCC
ACCACTTGTAAAACTGCTTGATGAGCGTCGTGCTGAAATTGCCCAAGGTCTTGAGCAAACAGAAAAAGCAGCACAAGAGT
TAGAACTGGCAAAAGCGAATGGTGAAGCGCTGCTGACAGAAGCTCGCTCAAAAGCTCAAGCCATCATCAACCAAGGTAAG
CAACGTCAAGAACAGATGGTTGCGGAAGCGGTTGATCTGGCAAATCAAGAGAAAGCGCGCATTGTAGCAGAAGGCAAAGC
AGAAGTGGAAAGCGAACGCAGCAAAGTTCGCCAAGAGCTGAAAGATGAGATGGCGGATCTGGTGATTGAAAGTGCCAGCA
AGCTGATTAATCGCAATCTGGATAGCTCGGCTAACCGCGACTTGGTGAACCGCTTCATCAACGAAATGTAG

Upstream 100 bases:

>100_bases
GCGGTGCCAATGATCGGTGTAGGTATCGGCTTGTACATCATCTTCGCTGTAGCGTAATTCGAATTAATAATTTTCATAAC
GTTATAGAAGAGAGGGTGCT

Downstream 100 bases:

>100_bases
GAGGGCACATGTCCGAATTGACAGTGGTAGCTCAACCCTACGCAAAAGCGGCGTTTGATTACGCACGCGACGTAGAATGC
TTGGACGATTGGCAACAAAT

Product: ATP synthase B chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b 2; ATPase subunit I 2; F-type ATPase subunit b 2; F-ATPase subunit b 2

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNLNASMFGQAISFVIFVWLCMKYVWPPLVKLLDERRAEIAQGLEQTEKAAQELELAKANGEALLTEARSKAQAIINQGK
QRQEQMVAEAVDLANQEKARIVAEGKAEVESERSKVRQELKDEMADLVIESASKLINRNLDSSANRDLVNRFINEM

Sequences:

>Translated_156_residues
MNLNASMFGQAISFVIFVWLCMKYVWPPLVKLLDERRAEIAQGLEQTEKAAQELELAKANGEALLTEARSKAQAIINQGK
QRQEQMVAEAVDLANQEKARIVAEGKAEVESERSKVRQELKDEMADLVIESASKLINRNLDSSANRDLVNRFINEM
>Mature_156_residues
MNLNASMFGQAISFVIFVWLCMKYVWPPLVKLLDERRAEIAQGLEQTEKAAQELELAKANGEALLTEARSKAQAIINQGK
QRQEQMVAEAVDLANQEKARIVAEGKAEVESERSKVRQELKDEMADLVIESASKLINRNLDSSANRDLVNRFINEM

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=46.1538461538462, Blast_Score=153, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF2_VIBHB (A7N2U5)

Other databases:

- EMBL:   CP000790
- RefSeq:   YP_001448228.1
- ProteinModelPortal:   A7N2U5
- STRING:   A7N2U5
- GeneID:   5557001
- GenomeReviews:   CP000790_GR
- KEGG:   vha:VIBHAR_06108
- NMPDR:   fig|338187.4.peg.3596
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   LEEYKQQ
- ProtClustDB:   CLSK2401374
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17576; Mature: 17576

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a13cbf4)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNASMFGQAISFVIFVWLCMKYVWPPLVKLLDERRAEIAQGLEQTEKAAQELELAKAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEALLTEARSKAQAIINQGKQRQEQMVAEAVDLANQEKARIVAEGKAEVESERSKVRQEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
KDEMADLVIESASKLINRNLDSSANRDLVNRFINEM
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCH
>Mature Secondary Structure
MNLNASMFGQAISFVIFVWLCMKYVWPPLVKLLDERRAEIAQGLEQTEKAAQELELAKAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEALLTEARSKAQAIINQGKQRQEQMVAEAVDLANQEKARIVAEGKAEVESERSKVRQEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
KDEMADLVIESASKLINRNLDSSANRDLVNRFINEM
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA