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The map label for this gene is 156977313

Identifier: 156977313

GI number: 156977313

Start: 1262801

End: 1264414

Strand: Direct

Name: 156977313

Synonym: VIBHAR_06099

Alternate gene names: NA

Gene position: 1262801-1264414 (Clockwise)

Preceding gene: 156977312

Following gene: 156977314

Centisome position: 57.3

GC content: 43.99

Gene sequence:

>1614_bases
ATGGAAAACATCGTCGAACTCGCGCCAGATTACTACCTCGATAACTTCTTTAAGCTCACACAACACGCTACCGAATGGTA
CAGCAACTTACTTAGCCAAGATGAGCACCAATGGCTATCCGCGTTTGAGACCTTAAACAAACCCGCGCAGTGCCTTCTCG
TACGTCTTTACAGCCGTAAAGGGTGTTGGTTTCGTAGCGACAAACTCAACTATCAAGAAATCGAGAATATCCAGTCGGCT
TTGGGTGAATTGGCAGTTCATGATTTTGTTTCGCTCTCCCCTGACCTAACGATACAGGAGTTAGCAACGAATCTACTAAC
CAAGCCAGAGATCGTCACTCTCTATCCTGAGCATCCCAAATCCCTCAAGAAAGAGGCATTAGTAGCATGCCTAAGTGAAG
AACGTTTCGAGCTATTTGAGGCTCTGAATTTCACAGTGATTAAGCTTAACTCCGAACACATGATTGATGTTTTGCTGGCA
CTGTTTTTTGCGAATACTCATCAAGACCTCAGCCAGTTCGTGCTTGATGACTTAGGCTTACACCAATTCGAACAATACCA
GTTAAGTAAAACGCGTCGATTCTTTGAGCGCAGAGAGCAAATCGATCGTCTTATTGAACTCAGGCAGCTCTCCAACCTTT
ATTGGCAATGCGACAGAAAACAAAAAGCCAGTCTCGATATTCTTATCGAAGCAATGCCAGAGCGGGTTGAACATCGTTAC
GTCGACCGTAAACGCGAGCACATGATTAACGACATTGCGCGTGATTACGAACGCATAAACGAACTTGAGATTGCAATTGC
GTTGTTTGAGACGACCACACTTGCGCCAAGTCGAGAGCGTCGTGCTCGCATCTACGATAAGCTAGAACAAAACGAACTAT
TTAGTGACATTGTCACTATAATGCTCACCCATCCTATCGATGTCTCTGAATTTGAGGTGGCACAGAAGCTCGAACAACGC
GTTAAACGTAAACTAGGCTTTAAAGTCCCGAGAGCTTCCAAGCCCAAATGCAACGAATACCACATCGAATTGGATCTATC
CCAACAACGTGTGGAGCTGGCAACCAAAGCACATTTCGAAAGTTTAGGTTGGACCGTTTTCTATTCTGAGAATACCCTAC
TCAACAGCTTGTTAGGGTTAACCTTGTGGGATGCGATTTTTGCACCGATAGAAGGTGCATTCATTAATGTATATCAACAT
CGACCATTGGATTTGTATCACGCCGATTTTGCCGATAAAAGAAAACAGCTTATCGACAATGCGCTTGAGCAAGTTAAACA
AGGAAATACGCAAGTACTGCTTGATACATACCTAGATAAAGTTGGGATCAGCAATCCCTTCGTCAGTTGGGCGTACGTGA
ATGAAGAGCTGATATCCCTTGCTCTTGAACATATCCCTAATGATCTGTTGGTCGAACTGTTTAACGTACAGTTAAGCGAC
CTAAAACTCTATCGAAACGGTATGCCGGATTTGATAGCTTTTAAAGATGGGAAGTTTGAATGGATAGAAGTGAAAGGTCC
GGGCGATAAACTCCAAGATAACCAATGGCGTTGGATCAAGGAGTTCAACCGCCTCAATGTGCCGTTTTCAGTCTGTTATG
TAAAAGCACTCTAA

Upstream 100 bases:

>100_bases
CTTAATCGTCAGTCCAGTTCTATTTATCGAATAGATCTGCAGAAATTGAATCAAAAAAGGCTTAACCTATAGGTTAAGCC
TTTTTTATTGTTAGTTGGTT

Downstream 100 bases:

>100_bases
TCACAGGAGAGGTGAAATCATCTTCGTTTTGCAGATTGGTTTTCTTCTCTGCCAACCTTTCATTACGGTTATTAAATGCG
ATTCCTCAAATGAATCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: VRR-NUC Domain Protein; VRR-NUC Domain Family Protein; Vrr-Nuc Domain Protein; DNA Polymerase III Epsilon Subunit; DNA-Directed DNA Polymerase; Vrr-Nuc DomaiN-Containing Protein

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MENIVELAPDYYLDNFFKLTQHATEWYSNLLSQDEHQWLSAFETLNKPAQCLLVRLYSRKGCWFRSDKLNYQEIENIQSA
LGELAVHDFVSLSPDLTIQELATNLLTKPEIVTLYPEHPKSLKKEALVACLSEERFELFEALNFTVIKLNSEHMIDVLLA
LFFANTHQDLSQFVLDDLGLHQFEQYQLSKTRRFFERREQIDRLIELRQLSNLYWQCDRKQKASLDILIEAMPERVEHRY
VDRKREHMINDIARDYERINELEIAIALFETTTLAPSRERRARIYDKLEQNELFSDIVTIMLTHPIDVSEFEVAQKLEQR
VKRKLGFKVPRASKPKCNEYHIELDLSQQRVELATKAHFESLGWTVFYSENTLLNSLLGLTLWDAIFAPIEGAFINVYQH
RPLDLYHADFADKRKQLIDNALEQVKQGNTQVLLDTYLDKVGISNPFVSWAYVNEELISLALEHIPNDLLVELFNVQLSD
LKLYRNGMPDLIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCYVKAL

Sequences:

>Translated_537_residues
MENIVELAPDYYLDNFFKLTQHATEWYSNLLSQDEHQWLSAFETLNKPAQCLLVRLYSRKGCWFRSDKLNYQEIENIQSA
LGELAVHDFVSLSPDLTIQELATNLLTKPEIVTLYPEHPKSLKKEALVACLSEERFELFEALNFTVIKLNSEHMIDVLLA
LFFANTHQDLSQFVLDDLGLHQFEQYQLSKTRRFFERREQIDRLIELRQLSNLYWQCDRKQKASLDILIEAMPERVEHRY
VDRKREHMINDIARDYERINELEIAIALFETTTLAPSRERRARIYDKLEQNELFSDIVTIMLTHPIDVSEFEVAQKLEQR
VKRKLGFKVPRASKPKCNEYHIELDLSQQRVELATKAHFESLGWTVFYSENTLLNSLLGLTLWDAIFAPIEGAFINVYQH
RPLDLYHADFADKRKQLIDNALEQVKQGNTQVLLDTYLDKVGISNPFVSWAYVNEELISLALEHIPNDLLVELFNVQLSD
LKLYRNGMPDLIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCYVKAL
>Mature_537_residues
MENIVELAPDYYLDNFFKLTQHATEWYSNLLSQDEHQWLSAFETLNKPAQCLLVRLYSRKGCWFRSDKLNYQEIENIQSA
LGELAVHDFVSLSPDLTIQELATNLLTKPEIVTLYPEHPKSLKKEALVACLSEERFELFEALNFTVIKLNSEHMIDVLLA
LFFANTHQDLSQFVLDDLGLHQFEQYQLSKTRRFFERREQIDRLIELRQLSNLYWQCDRKQKASLDILIEAMPERVEHRY
VDRKREHMINDIARDYERINELEIAIALFETTTLAPSRERRARIYDKLEQNELFSDIVTIMLTHPIDVSEFEVAQKLEQR
VKRKLGFKVPRASKPKCNEYHIELDLSQQRVELATKAHFESLGWTVFYSENTLLNSLLGLTLWDAIFAPIEGAFINVYQH
RPLDLYHADFADKRKQLIDNALEQVKQGNTQVLLDTYLDKVGISNPFVSWAYVNEELISLALEHIPNDLLVELFNVQLSD
LKLYRNGMPDLIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCYVKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI226246523, Length=200, Percent_Identity=28, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63127; Mature: 63127

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIVELAPDYYLDNFFKLTQHATEWYSNLLSQDEHQWLSAFETLNKPAQCLLVRLYSRK
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
GCWFRSDKLNYQEIENIQSALGELAVHDFVSLSPDLTIQELATNLLTKPEIVTLYPEHPK
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCH
SLKKEALVACLSEERFELFEALNFTVIKLNSEHMIDVLLALFFANTHQDLSQFVLDDLGL
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCH
HQFEQYQLSKTRRFFERREQIDRLIELRQLSNLYWQCDRKQKASLDILIEAMPERVEHRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VDRKREHMINDIARDYERINELEIAIALFETTTLAPSRERRARIYDKLEQNELFSDIVTI
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MLTHPIDVSEFEVAQKLEQRVKRKLGFKVPRASKPKCNEYHIELDLSQQRVELATKAHFE
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
SLGWTVFYSENTLLNSLLGLTLWDAIFAPIEGAFINVYQHRPLDLYHADFADKRKQLIDN
HCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHH
ALEQVKQGNTQVLLDTYLDKVGISNPFVSWAYVNEELISLALEHIPNDLLVELFNVQLSD
HHHHHHCCCCEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
LKLYRNGMPDLIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCYVKAL
HHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHEEECC
>Mature Secondary Structure
MENIVELAPDYYLDNFFKLTQHATEWYSNLLSQDEHQWLSAFETLNKPAQCLLVRLYSRK
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
GCWFRSDKLNYQEIENIQSALGELAVHDFVSLSPDLTIQELATNLLTKPEIVTLYPEHPK
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCH
SLKKEALVACLSEERFELFEALNFTVIKLNSEHMIDVLLALFFANTHQDLSQFVLDDLGL
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCH
HQFEQYQLSKTRRFFERREQIDRLIELRQLSNLYWQCDRKQKASLDILIEAMPERVEHRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VDRKREHMINDIARDYERINELEIAIALFETTTLAPSRERRARIYDKLEQNELFSDIVTI
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MLTHPIDVSEFEVAQKLEQRVKRKLGFKVPRASKPKCNEYHIELDLSQQRVELATKAHFE
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
SLGWTVFYSENTLLNSLLGLTLWDAIFAPIEGAFINVYQHRPLDLYHADFADKRKQLIDN
HCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHH
ALEQVKQGNTQVLLDTYLDKVGISNPFVSWAYVNEELISLALEHIPNDLLVELFNVQLSD
HHHHHHCCCCEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
LKLYRNGMPDLIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCYVKAL
HHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA